RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 FCHSD2O94868 740 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 PRSS12P56730 875 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 PTGDRQ13258 359 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 STAC3Q96MF2 364 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 RABGEF1Q9UJ41 708 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
CASC9-201ENST00000504531 NUP160Q12769 1436 aa12.46□□□□□ -0.41
CASC9-201ENST00000504531 CDCA7LQ96GN5 454 aa12.46□□□□□ -0.41
CASC9-201ENST00000504531 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
CASC9-201ENST00000504531 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.41
CASC9-201ENST00000504531 HRO43593 1189 aa12.45□□□□□ -0.42
CASC9-201ENST00000504531 PROX2Q3B8N5 592 aa12.45□□□□□ -0.42
CASC9-201ENST00000504531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
CASC9-201ENST00000504531 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
CASC9-201ENST00000504531 TONSLQ96HA7 1378 aa12.44□□□□□ -0.42
CASC9-201ENST00000504531 CCER2I3L3R5 266 aa12.44□□□□□ -0.42
CASC9-201ENST00000504531 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
CASC9-201ENST00000504531 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
CASC9-201ENST00000504531 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
CASC9-201ENST00000504531 BHMG1C9JSJ3 638 aaPredicted RBP12.42□□□□□ -0.42
CASC9-201ENST00000504531 HIC1Q14526 733 aa12.42□□□□□ -0.42
CASC9-201ENST00000504531 LMOD2Q6P5Q4 547 aa12.42□□□□□ -0.42
CASC9-201ENST00000504531 NUP153P49790 1475 aaKnown RBP12.41□□□□□ -0.42
CASC9-201ENST00000504531 DNMT1P26358 1616 aaKnown RBP12.41□□□□□ -0.42
CASC9-201ENST00000504531 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
CASC9-201ENST00000504531 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
CASC9-201ENST00000504531 KIAA1468Q9P260 1216 aa12.41□□□□□ -0.42
CASC9-201ENST00000504531 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
CASC9-201ENST00000504531 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
CASC9-201ENST00000504531 TROQ12816 1431 aaPredicted RBP12.39□□□□□ -0.43
CASC9-201ENST00000504531 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
CASC9-201ENST00000504531 PADI6Q6TGC4 694 aa12.39□□□□□ -0.43
CASC9-201ENST00000504531 MYT1LQ9UL68 1186 aa12.39□□□□□ -0.43
CASC9-201ENST00000504531 ABCC10Q5T3U5 1492 aa12.39□□□□□ -0.43
CASC9-201ENST00000504531 ITSN2Q9NZM3 1697 aa12.38□□□□□ -0.43
CASC9-201ENST00000504531 LAPTM4BQ86VI4 370 aa12.38□□□□□ -0.43
CASC9-201ENST00000504531 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
CASC9-201ENST00000504531 DAPK1P53355 1430 aa12.37□□□□□ -0.43
CASC9-201ENST00000504531 KDM5BQ9UGL1 1544 aa12.37□□□□□ -0.43
CASC9-201ENST00000504531 GNPATO15228 680 aa12.37□□□□□ -0.43
CASC9-201ENST00000504531 CDK13Q14004 1512 aaKnown RBP12.37□□□□□ -0.43
CASC9-201ENST00000504531 ADGRL2O95490 1459 aa12.36□□□□□ -0.43
CASC9-201ENST00000504531 GPR37O15354 613 aa12.36□□□□□ -0.43
CASC9-201ENST00000504531 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
CASC9-201ENST00000504531 ABCC5O15440 1437 aa12.35□□□□□ -0.43
CASC9-201ENST00000504531 GOLGA8CPA6NN73 597 aa12.34□□□□□ -0.43
CASC9-201ENST00000504531 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
CASC9-201ENST00000504531 FAM198AQ9UFP1 575 aa12.34□□□□□ -0.43
CASC9-201ENST00000504531 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
CASC9-201ENST00000504531 TATDN2Q93075 761 aa12.33□□□□□ -0.44
CASC9-201ENST00000504531 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
CASC9-201ENST00000504531 FAM98CQ17RN3 349 aaKnown RBP12.32□□□□□ -0.44
CASC9-201ENST00000504531 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
CASC9-201ENST00000504531 MPHOSPH9Q99550 1183 aa12.32□□□□□ -0.44
CASC9-201ENST00000504531 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
CASC9-201ENST00000504531 ANKRD30BQ9BXX2 1392 aa12.31□□□□□ -0.44
CASC9-201ENST00000504531 ANP32CO43423 234 aa12.31□□□□□ -0.44
CASC9-201ENST00000504531 RPRD2Q5VT52 1461 aaKnown RBP12.31□□□□□ -0.44
CASC9-201ENST00000504531 SHANK2Q9UPX8 1470 aa12.31□□□□□ -0.44
CASC9-201ENST00000504531 ADGBQ8N7X0 1667 aa12.31□□□□□ -0.44
CASC9-201ENST00000504531 GPATCH8Q9UKJ3 1502 aaKnown RBP12.31□□□□□ -0.44
CASC9-201ENST00000504531 ABCA8O94911 1581 aa12.3□□□□□ -0.44
CASC9-201ENST00000504531 KIF13AQ9H1H9 1805 aa12.3□□□□□ -0.44
CASC9-201ENST00000504531 KDM6BO15054 1643 aa12.3□□□□□ -0.44
CASC9-201ENST00000504531 PTPRGP23470 1445 aa12.3□□□□□ -0.44
CASC9-201ENST00000504531 NUDT18Q6ZVK8 323 aa12.3□□□□□ -0.44
CASC9-201ENST00000504531 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
CASC9-201ENST00000504531 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
CASC9-201ENST00000504531 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
CASC9-201ENST00000504531 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
CASC9-201ENST00000504531 RRP7BPQ9NSQ0 103 aa12.28□□□□□ -0.44
CASC9-201ENST00000504531 CROCC2H7BZ55 1655 aa12.27□□□□□ -0.45
CASC9-201ENST00000504531 OATP04181 439 aa12.27□□□□□ -0.45
CASC9-201ENST00000504531 RSPH4AQ5TD94 716 aa12.27□□□□□ -0.45
CASC9-201ENST00000504531 ANKK1Q8NFD2 765 aa12.27□□□□□ -0.45
CASC9-201ENST00000504531 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
CASC9-201ENST00000504531 ADGRG1Q9Y653 693 aa12.27□□□□□ -0.45
CASC9-201ENST00000504531 CAMSAP2Q08AD1 1489 aa12.27□□□□□ -0.45
CASC9-201ENST00000504531 EIF4G2P78344 907 aaKnown RBP eCLIP12.26□□□□□ -0.45
CASC9-201ENST00000504531 WNT2BQ93097 391 aa12.26□□□□□ -0.45
CASC9-201ENST00000504531 SMAPO00193 183 aa12.25□□□□□ -0.45
CASC9-201ENST00000504531 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
CASC9-201ENST00000504531 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
CASC9-201ENST00000504531 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
CASC9-201ENST00000504531 ANKRD30AQ9BXX3 1397 aa12.25□□□□□ -0.45
CASC9-201ENST00000504531 DIP2BQ9P265 1576 aa12.25□□□□□ -0.45
CASC9-201ENST00000504531 PLEKHD1A6NEE1 506 aa12.24□□□□□ -0.45
CASC9-201ENST00000504531 FECHP22830 423 aa12.24□□□□□ -0.45
CASC9-201ENST00000504531 HDGFP51858 240 aaKnown RBP12.24□□□□□ -0.45
CASC9-201ENST00000504531 ARHGEF5Q12774 1597 aa12.24□□□□□ -0.45
CASC9-201ENST00000504531 MAP2K5Q13163 448 aa12.24□□□□□ -0.45
CASC9-201ENST00000504531 KIF14Q15058 1648 aa12.24□□□□□ -0.45
CASC9-201ENST00000504531 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
CASC9-201ENST00000504531 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
CASC9-201ENST00000504531 EYA1Q99502 592 aa12.24□□□□□ -0.45
CASC9-201ENST00000504531 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
CASC9-201ENST00000504531 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
CASC9-201ENST00000504531 TEX14Q8IWB6 1497 aa12.23□□□□□ -0.45
CASC9-201ENST00000504531 C3orf80F5H4A9 247 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms