RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RGPD1P0DJD0 1748 aa19.79■□□□□ 0.76
LSM6-204ENST00000504181 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
LSM6-204ENST00000504181 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
LSM6-204ENST00000504181 ADGRL2O95490 1459 aa19.76■□□□□ 0.75
LSM6-204ENST00000504181 SLIT2O94813 1529 aa19.75■□□□□ 0.75
LSM6-204ENST00000504181 ANKRD50Q9ULJ7 1429 aa19.75■□□□□ 0.75
LSM6-204ENST00000504181 PXDNQ92626 1479 aa19.73■□□□□ 0.75
LSM6-204ENST00000504181 USP32Q8NFA0 1604 aa19.73■□□□□ 0.75
LSM6-204ENST00000504181 UNC5CLQ8IV45 518 aa19.73■□□□□ 0.75
LSM6-204ENST00000504181 SEPT12Q8IYM1 358 aa19.73■□□□□ 0.75
LSM6-204ENST00000504181 NWD2Q9ULI1 1742 aa19.73■□□□□ 0.75
LSM6-204ENST00000504181 BAG6P46379 1132 aa19.72■□□□□ 0.75
LSM6-204ENST00000504181 TNS1Q9HBL0 1735 aaKnown RBP19.72■□□□□ 0.75
LSM6-204ENST00000504181 R3HDM1Q15032 1099 aaKnown RBP19.7■□□□□ 0.74
LSM6-204ENST00000504181 XPCQ01831 940 aaPredicted RBP19.68■□□□□ 0.74
LSM6-204ENST00000504181 KRT27Q7Z3Y8 459 aa19.68■□□□□ 0.74
LSM6-204ENST00000504181 NPHP3Q7Z494 1330 aa19.68■□□□□ 0.74
LSM6-204ENST00000504181 ABCA3Q99758 1704 aa19.67■□□□□ 0.74
LSM6-204ENST00000504181 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
LSM6-204ENST00000504181 KIF1BO60333 1816 aa19.66■□□□□ 0.74
LSM6-204ENST00000504181 NEXMIFQ5QGS0 1516 aa19.66■□□□□ 0.74
LSM6-204ENST00000504181 EN1Q05925 392 aaPredicted RBP19.65■□□□□ 0.74
LSM6-204ENST00000504181 ESCO1Q5FWF5 840 aa19.64■□□□□ 0.73
LSM6-204ENST00000504181 ROBO2Q9HCK4 1378 aa19.64■□□□□ 0.73
LSM6-204ENST00000504181 CAMTA1Q9Y6Y1 1673 aa19.63■□□□□ 0.73
LSM6-204ENST00000504181 CDC42BPGQ6DT37 1551 aa19.63■□□□□ 0.73
LSM6-204ENST00000504181 CCDC9Q9Y3X0 531 aaKnown RBP19.63■□□□□ 0.73
LSM6-204ENST00000504181 A0A0G2JS52 829 aa19.61■□□□□ 0.73
LSM6-204ENST00000504181 FOXO3O43524 673 aa19.61■□□□□ 0.73
LSM6-204ENST00000504181 MYT1Q01538 1121 aa19.61■□□□□ 0.73
LSM6-204ENST00000504181 IFFO2Q5TF58 517 aa19.61■□□□□ 0.73
LSM6-204ENST00000504181 NRAPQ86VF7 1730 aa19.61■□□□□ 0.73
LSM6-204ENST00000504181 VPS72Q15906 364 aa19.6■□□□□ 0.73
LSM6-204ENST00000504181 RGPD8O14715 1765 aaPredicted RBP19.6■□□□□ 0.73
LSM6-204ENST00000504181 ONECUT3O60422 494 aaPredicted RBP19.59■□□□□ 0.73
LSM6-204ENST00000504181 CLTCL1P53675 1640 aa19.58■□□□□ 0.73
LSM6-204ENST00000504181 KIF1AQ12756 1690 aa19.58■□□□□ 0.72
LSM6-204ENST00000504181 RREB1Q92766 1687 aa19.58■□□□□ 0.72
LSM6-204ENST00000504181 NUP188Q5SRE5 1749 aa19.56■□□□□ 0.72
LSM6-204ENST00000504181 ADGRB2O60241 1585 aa19.56■□□□□ 0.72
LSM6-204ENST00000504181 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
LSM6-204ENST00000504181 LRPPRCP42704 1394 aaKnown RBP19.55■□□□□ 0.72
LSM6-204ENST00000504181 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
LSM6-204ENST00000504181 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
LSM6-204ENST00000504181 EZH2Q15910 746 aaKnown RBP19.54■□□□□ 0.72
LSM6-204ENST00000504181 FAM182BQ5T319 152 aa19.54■□□□□ 0.72
LSM6-204ENST00000504181 DISP2A7MBM2 1401 aa19.53■□□□□ 0.72
LSM6-204ENST00000504181 PRAG1Q86YV5 1406 aa19.53■□□□□ 0.72
LSM6-204ENST00000504181 CHD4Q14839 1912 aa19.53■□□□□ 0.72
LSM6-204ENST00000504181 SPATA31A3Q5VYP0 1347 aa19.52■□□□□ 0.72
LSM6-204ENST00000504181 SENP3-EIF4A1A0A087X0R7 540 aa19.52■□□□□ 0.72
LSM6-204ENST00000504181 NUTM2FA1L443 756 aa19.52■□□□□ 0.72
LSM6-204ENST00000504181 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
LSM6-204ENST00000504181 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
LSM6-204ENST00000504181 FAM98CQ17RN3 349 aaKnown RBP19.51■□□□□ 0.71
LSM6-204ENST00000504181 NUP155O75694 1391 aa19.5■□□□□ 0.71
LSM6-204ENST00000504181 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
LSM6-204ENST00000504181 IFT172Q9UG01 1749 aa19.5■□□□□ 0.71
LSM6-204ENST00000504181 PPLO60437 1756 aa19.49■□□□□ 0.71
LSM6-204ENST00000504181 THSD7AQ9UPZ6 1657 aa19.49■□□□□ 0.71
LSM6-204ENST00000504181 CABLES1Q8TDN4 633 aa19.49■□□□□ 0.71
LSM6-204ENST00000504181 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
LSM6-204ENST00000504181 NAIPQ13075 1403 aa19.48■□□□□ 0.71
LSM6-204ENST00000504181 PPP1R1BQ9UD71 204 aaPredicted RBP19.47■□□□□ 0.71
LSM6-204ENST00000504181 TNS3Q68CZ2 1445 aa19.46■□□□□ 0.71
LSM6-204ENST00000504181 ADRA2BP18089 450 aa19.46■□□□□ 0.71
LSM6-204ENST00000504181 COL14A1Q05707 1796 aaKnown RBP19.45■□□□□ 0.7
LSM6-204ENST00000504181 APLP2Q06481 763 aa19.44■□□□□ 0.7
LSM6-204ENST00000504181 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
LSM6-204ENST00000504181 CAMKK2Q96RR4 588 aa19.44■□□□□ 0.7
LSM6-204ENST00000504181 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
LSM6-204ENST00000504181 ZNF784Q8NCA9 323 aaPredicted RBP19.43■□□□□ 0.7
LSM6-204ENST00000504181 KNDC1Q76NI1 1749 aa19.42■□□□□ 0.7
LSM6-204ENST00000504181 FAM83GA6ND36 823 aa19.4■□□□□ 0.7
LSM6-204ENST00000504181 TRIM37O94972 964 aa19.4■□□□□ 0.7
LSM6-204ENST00000504181 SPON1Q9HCB6 807 aa19.39■□□□□ 0.69
LSM6-204ENST00000504181 UTRNP46939 3433 aa19.38■□□□□ 0.69
LSM6-204ENST00000504181 VGFO15240 615 aaPredicted RBP19.38■□□□□ 0.69
LSM6-204ENST00000504181 LMOD2Q6P5Q4 547 aa19.38■□□□□ 0.69
LSM6-204ENST00000504181 PARD3Q8TEW0 1356 aa19.38■□□□□ 0.69
LSM6-204ENST00000504181 BTG4Q9NY30 223 aa19.38■□□□□ 0.69
LSM6-204ENST00000504181 NRKQ7Z2Y5 1582 aa19.37■□□□□ 0.69
LSM6-204ENST00000504181 APBA3O96018 575 aa19.37■□□□□ 0.69
LSM6-204ENST00000504181 C1QTNF8P60827 252 aa19.36■□□□□ 0.69
LSM6-204ENST00000504181 WAPLQ7Z5K2 1190 aa19.36■□□□□ 0.69
LSM6-204ENST00000504181 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
LSM6-204ENST00000504181 CRYBG1Q9Y4K1 1723 aa19.36■□□□□ 0.69
LSM6-204ENST00000504181 ROCK1Q13464 1354 aa19.35■□□□□ 0.69
LSM6-204ENST00000504181 CASZ1Q86V15 1759 aa19.35■□□□□ 0.69
LSM6-204ENST00000504181 TRPM3Q9HCF6 1732 aaPredicted RBP19.35■□□□□ 0.69
LSM6-204ENST00000504181 KCNQ2O43526 872 aa19.35■□□□□ 0.69
LSM6-204ENST00000504181 MYOM1P52179 1685 aa19.35■□□□□ 0.69
LSM6-204ENST00000504181 NBPF8Q3BBV2 869 aa19.34■□□□□ 0.69
LSM6-204ENST00000504181 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
LSM6-204ENST00000504181 ALS2Q96Q42 1657 aa19.33■□□□□ 0.69
LSM6-204ENST00000504181 SPATA31A5Q5VU36 1347 aa19.33■□□□□ 0.69
LSM6-204ENST00000504181 SPATA31A7Q8IWB4 1347 aa19.33■□□□□ 0.69
LSM6-204ENST00000504181 PSME1Q06323 249 aa19.33■□□□□ 0.68
LSM6-204ENST00000504181 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
LSM6-204ENST00000504181 CEP350Q5VT06 3117 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms