RNA–Protein interactions for RNA: ENST00000503248.1

PHF3-206, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-206ENST00000503248 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
PHF3-206ENST00000503248 IL21Q9HBE4 155 aa8.62□□□□□ -1.03
PHF3-206ENST00000503248 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
PHF3-206ENST00000503248 NUTM2BA6NNL0 878 aaPredicted RBP8.61□□□□□ -1.03
PHF3-206ENST00000503248 NUTM2EB1AL46 878 aaPredicted RBP8.61□□□□□ -1.03
PHF3-206ENST00000503248 FLIIQ13045 1269 aa8.61□□□□□ -1.03
PHF3-206ENST00000503248 NUTM2DQ5VT03 806 aaPredicted RBP8.61□□□□□ -1.03
PHF3-206ENST00000503248 NUTM2AQ8IVF1 878 aaPredicted RBP8.61□□□□□ -1.03
PHF3-206ENST00000503248 BANK1Q8NDB2 785 aa8.61□□□□□ -1.03
PHF3-206ENST00000503248 C6orf229H3BNL8 230 aa8.6□□□□□ -1.03
PHF3-206ENST00000503248 SOCS7O14512 581 aa8.6□□□□□ -1.03
PHF3-206ENST00000503248 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
PHF3-206ENST00000503248 SCUBE3Q8IX30 993 aa8.6□□□□□ -1.03
PHF3-206ENST00000503248 HELBQ8NG08 1087 aaPredicted RBP8.6□□□□□ -1.03
PHF3-206ENST00000503248 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
PHF3-206ENST00000503248 BLOC1S3Q6QNY0 202 aa8.59□□□□□ -1.03
PHF3-206ENST00000503248 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
PHF3-206ENST00000503248 HRCP23327 699 aa8.58□□□□□ -1.04
PHF3-206ENST00000503248 PUS10Q3MIT2 529 aaKnown RBP8.58□□□□□ -1.04
PHF3-206ENST00000503248 BRICD5Q6PL45 260 aa8.58□□□□□ -1.04
PHF3-206ENST00000503248 MTRQ99707 1265 aa8.58□□□□□ -1.04
PHF3-206ENST00000503248 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
PHF3-206ENST00000503248 PCDHGC3Q9UN70 934 aa8.58□□□□□ -1.04
PHF3-206ENST00000503248 ZPR1O75312 459 aa8.57□□□□□ -1.04
PHF3-206ENST00000503248 ITGBL1O95965 494 aaPredicted RBP8.57□□□□□ -1.04
PHF3-206ENST00000503248 RFC5P40937 340 aa8.57□□□□□ -1.04
PHF3-206ENST00000503248 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
PHF3-206ENST00000503248 ADH1BP00325 375 aa8.56□□□□□ -1.04
PHF3-206ENST00000503248 CSPP1Q1MSJ5 1256 aa8.56□□□□□ -1.04
PHF3-206ENST00000503248 TJAP1Q5JTD0 557 aa8.56□□□□□ -1.04
PHF3-206ENST00000503248 IFFO2Q5TF58 517 aa8.56□□□□□ -1.04
PHF3-206ENST00000503248 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
PHF3-206ENST00000503248 A0A0G2JS52 829 aa8.55□□□□□ -1.04
PHF3-206ENST00000503248 COPS2P61201 443 aa8.55□□□□□ -1.04
PHF3-206ENST00000503248 GUCA2AQ02747 115 aa8.55□□□□□ -1.04
PHF3-206ENST00000503248 KCNC4Q03721 635 aa8.55□□□□□ -1.04
PHF3-206ENST00000503248 THAP11Q96EK4 314 aa8.55□□□□□ -1.04
PHF3-206ENST00000503248 SPSB2Q99619 263 aa8.55□□□□□ -1.04
PHF3-206ENST00000503248 PRM3Q9NNZ6 103 aa8.55□□□□□ -1.04
PHF3-206ENST00000503248 QPCTQ16769 361 aa8.54□□□□□ -1.04
PHF3-206ENST00000503248 HLA-CQ95604 372 aa8.54□□□□□ -1.04
PHF3-206ENST00000503248 GGCXP38435 758 aa8.53□□□□□ -1.04
PHF3-206ENST00000503248 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
PHF3-206ENST00000503248 PNMA1Q8ND90 353 aa8.52□□□□□ -1.05
PHF3-206ENST00000503248 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
PHF3-206ENST00000503248 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
PHF3-206ENST00000503248 RNF19BQ6ZMZ0 732 aa8.51□□□□□ -1.05
PHF3-206ENST00000503248 JUNDP17535 347 aa8.5□□□□□ -1.05
PHF3-206ENST00000503248 AP1G2O75843 785 aa8.49□□□□□ -1.05
PHF3-206ENST00000503248 MMP16P51512 607 aa8.49□□□□□ -1.05
PHF3-206ENST00000503248 PTPRNQ16849 979 aa8.49□□□□□ -1.05
PHF3-206ENST00000503248 SLC6A16Q9GZN6 736 aa8.49□□□□□ -1.05
PHF3-206ENST00000503248 CFAP99D6REC4 459 aa8.48□□□□□ -1.05
PHF3-206ENST00000503248 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
PHF3-206ENST00000503248 LYPD8Q6UX82 237 aa8.48□□□□□ -1.05
PHF3-206ENST00000503248 USP17L8P0C7I0 530 aa8.47□□□□□ -1.05
PHF3-206ENST00000503248 MCM6Q14566 821 aa8.47□□□□□ -1.05
PHF3-206ENST00000503248 TSC1Q92574 1164 aa8.47□□□□□ -1.05
PHF3-206ENST00000503248 SYMPKQ92797 1274 aaKnown RBP8.47□□□□□ -1.05
PHF3-206ENST00000503248 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
PHF3-206ENST00000503248 RAD21O60216 631 aa8.45□□□□□ -1.06
PHF3-206ENST00000503248 WWC1Q8IX03 1113 aa8.45□□□□□ -1.06
PHF3-206ENST00000503248 ARMC2Q8NEN0 867 aa8.45□□□□□ -1.06
PHF3-206ENST00000503248 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
PHF3-206ENST00000503248 CCNYL3P0C7X3 344 aa8.44□□□□□ -1.06
PHF3-206ENST00000503248 TLL1O43897 1013 aa8.43□□□□□ -1.06
PHF3-206ENST00000503248 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
PHF3-206ENST00000503248 CTDSPL2Q05D32 466 aa8.43□□□□□ -1.06
PHF3-206ENST00000503248 ZC3H4Q9UPT8 1303 aaKnown RBP8.43□□□□□ -1.06
PHF3-206ENST00000503248 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
PHF3-206ENST00000503248 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
PHF3-206ENST00000503248 NUDT12Q9BQG2 462 aa8.42□□□□□ -1.06
PHF3-206ENST00000503248 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
PHF3-206ENST00000503248 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
PHF3-206ENST00000503248 ANKLE1Q8NAG6 615 aa8.41□□□□□ -1.06
PHF3-206ENST00000503248 EVA1BQ9NVM1 165 aa8.41□□□□□ -1.06
PHF3-206ENST00000503248 TRAF7Q6Q0C0 670 aa8.4□□□□□ -1.06
PHF3-206ENST00000503248 MTMR14Q8NCE2 650 aa8.4□□□□□ -1.06
PHF3-206ENST00000503248 A6NJR5 290 aa8.39□□□□□ -1.07
PHF3-206ENST00000503248 S1PR4O95977 384 aa8.39□□□□□ -1.07
PHF3-206ENST00000503248 F12P00748 615 aaPredicted RBP8.39□□□□□ -1.07
PHF3-206ENST00000503248 KCNH2Q12809 1159 aa8.39□□□□□ -1.07
PHF3-206ENST00000503248 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
PHF3-206ENST00000503248 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.39□□□□□ -1.07
PHF3-206ENST00000503248 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
PHF3-206ENST00000503248 NBPF14Q5TI25 921 aa8.38□□□□□ -1.07
PHF3-206ENST00000503248 NKX2-3Q8TAU0 364 aa8.38□□□□□ -1.07
PHF3-206ENST00000503248 SNRKQ9NRH2 765 aa8.38□□□□□ -1.07
PHF3-206ENST00000503248 ZBTB24O43167 697 aaPredicted RBP8.37□□□□□ -1.07
PHF3-206ENST00000503248 CTHP32929 405 aa8.37□□□□□ -1.07
PHF3-206ENST00000503248 PRDM9Q9NQV7 894 aa8.37□□□□□ -1.07
PHF3-206ENST00000503248 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
PHF3-206ENST00000503248 LRRN4Q8WUT4 740 aa8.36□□□□□ -1.07
PHF3-206ENST00000503248 GJD4Q96KN9 370 aaPredicted RBP8.36□□□□□ -1.07
PHF3-206ENST00000503248 ZMYND15Q9H091 742 aa8.36□□□□□ -1.07
PHF3-206ENST00000503248 GPSM3Q9Y4H4 160 aa8.36□□□□□ -1.07
PHF3-206ENST00000503248 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
PHF3-206ENST00000503248 RPIAP49247 311 aa8.35□□□□□ -1.07
PHF3-206ENST00000503248 WASHC4Q2M389 1173 aa8.35□□□□□ -1.07
PHF3-206ENST00000503248 PPP1R18Q6NYC8 613 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms