RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 UNC5CLQ8IV45 518 aa18.14■□□□□ 0.49
TNPO1-202ENST00000503084 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
TNPO1-202ENST00000503084 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
TNPO1-202ENST00000503084 PXDNQ92626 1479 aa18.13■□□□□ 0.49
TNPO1-202ENST00000503084 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
TNPO1-202ENST00000503084 IQGAP3Q86VI3 1631 aa18.11■□□□□ 0.49
TNPO1-202ENST00000503084 E9PCH4 1651 aa18.11■□□□□ 0.49
TNPO1-202ENST00000503084 KRT27Q7Z3Y8 459 aa18.09■□□□□ 0.49
TNPO1-202ENST00000503084 USP32Q8NFA0 1604 aa18.08■□□□□ 0.48
TNPO1-202ENST00000503084 RGPD1P0DJD0 1748 aa18.07■□□□□ 0.48
TNPO1-202ENST00000503084 EN1Q05925 392 aaPredicted RBP18.07■□□□□ 0.48
TNPO1-202ENST00000503084 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
TNPO1-202ENST00000503084 NPHP3Q7Z494 1330 aa18.06■□□□□ 0.48
TNPO1-202ENST00000503084 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
TNPO1-202ENST00000503084 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
TNPO1-202ENST00000503084 SENP3-EIF4A1A0A087X0R7 540 aa18.04■□□□□ 0.48
TNPO1-202ENST00000503084 ROBO2Q9HCK4 1378 aa18.04■□□□□ 0.48
TNPO1-202ENST00000503084 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
TNPO1-202ENST00000503084 PLCH1Q4KWH8 1693 aa18.03■□□□□ 0.48
TNPO1-202ENST00000503084 VPS72Q15906 364 aa18.03■□□□□ 0.48
TNPO1-202ENST00000503084 DISP2A7MBM2 1401 aa18.03■□□□□ 0.48
TNPO1-202ENST00000503084 VPS8Q8N3P4 1428 aa18.01■□□□□ 0.47
TNPO1-202ENST00000503084 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
TNPO1-202ENST00000503084 NWD2Q9ULI1 1742 aa18■□□□□ 0.47
TNPO1-202ENST00000503084 CDC42BPGQ6DT37 1551 aa18■□□□□ 0.47
TNPO1-202ENST00000503084 CCDC9Q9Y3X0 531 aaKnown RBP17.99■□□□□ 0.47
TNPO1-202ENST00000503084 A0A0G2JS52 829 aa17.98■□□□□ 0.47
TNPO1-202ENST00000503084 FOXO3O43524 673 aa17.98■□□□□ 0.47
TNPO1-202ENST00000503084 MYT1Q01538 1121 aa17.98■□□□□ 0.47
TNPO1-202ENST00000503084 ESCO1Q5FWF5 840 aa17.98■□□□□ 0.47
TNPO1-202ENST00000503084 CAMTA1Q9Y6Y1 1673 aa17.98■□□□□ 0.47
TNPO1-202ENST00000503084 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
TNPO1-202ENST00000503084 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
TNPO1-202ENST00000503084 EZH2Q15910 746 aaKnown RBP17.96■□□□□ 0.47
TNPO1-202ENST00000503084 ZNF784Q8NCA9 323 aaPredicted RBP17.96■□□□□ 0.47
TNPO1-202ENST00000503084 ADGRB2O60241 1585 aa17.96■□□□□ 0.46
TNPO1-202ENST00000503084 NINLQ9Y2I6 1382 aa17.95■□□□□ 0.46
TNPO1-202ENST00000503084 CEP350Q5VT06 3117 aa17.95■□□□□ 0.46
TNPO1-202ENST00000503084 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
TNPO1-202ENST00000503084 FAM182BQ5T319 152 aa17.94■□□□□ 0.46
TNPO1-202ENST00000503084 UTRNP46939 3433 aa17.94■□□□□ 0.46
TNPO1-202ENST00000503084 ABCA3Q99758 1704 aa17.93■□□□□ 0.46
TNPO1-202ENST00000503084 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
TNPO1-202ENST00000503084 SPATA31A3Q5VYP0 1347 aa17.93■□□□□ 0.46
TNPO1-202ENST00000503084 LRPPRCP42704 1394 aaKnown RBP17.92■□□□□ 0.46
TNPO1-202ENST00000503084 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
TNPO1-202ENST00000503084 FAM98CQ17RN3 349 aaKnown RBP17.92■□□□□ 0.46
TNPO1-202ENST00000503084 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
TNPO1-202ENST00000503084 RREB1Q92766 1687 aa17.9■□□□□ 0.46
TNPO1-202ENST00000503084 CAMKK2Q96RR4 588 aa17.9■□□□□ 0.46
TNPO1-202ENST00000503084 PPP1R1BQ9UD71 204 aaPredicted RBP17.9■□□□□ 0.46
TNPO1-202ENST00000503084 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.46
TNPO1-202ENST00000503084 C1QTNF8P60827 252 aa17.89■□□□□ 0.45
TNPO1-202ENST00000503084 CCDC144AA2RUR9 1427 aa17.89■□□□□ 0.45
TNPO1-202ENST00000503084 HAP1P54257 671 aaPredicted RBP17.88■□□□□ 0.45
TNPO1-202ENST00000503084 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
TNPO1-202ENST00000503084 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
TNPO1-202ENST00000503084 PARD3Q8TEW0 1356 aa17.87■□□□□ 0.45
TNPO1-202ENST00000503084 NAIPQ13075 1403 aa17.87■□□□□ 0.45
TNPO1-202ENST00000503084 TNS3Q68CZ2 1445 aa17.87■□□□□ 0.45
TNPO1-202ENST00000503084 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
TNPO1-202ENST00000503084 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
TNPO1-202ENST00000503084 PLEKHG5O94827 1062 aa17.85■□□□□ 0.45
TNPO1-202ENST00000503084 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
TNPO1-202ENST00000503084 SPON1Q9HCB6 807 aa17.85■□□□□ 0.45
TNPO1-202ENST00000503084 TRIM37O94972 964 aa17.82■□□□□ 0.44
TNPO1-202ENST00000503084 NUP155O75694 1391 aa17.81■□□□□ 0.44
TNPO1-202ENST00000503084 FAM83GA6ND36 823 aa17.81■□□□□ 0.44
TNPO1-202ENST00000503084 KCNQ2O43526 872 aa17.81■□□□□ 0.44
TNPO1-202ENST00000503084 NRKQ7Z2Y5 1582 aa17.8■□□□□ 0.44
TNPO1-202ENST00000503084 FMN2Q9NZ56 1722 aa17.8■□□□□ 0.44
TNPO1-202ENST00000503084 KRT28Q7Z3Y7 464 aa17.79■□□□□ 0.44
TNPO1-202ENST00000503084 APBA3O96018 575 aa17.78■□□□□ 0.44
TNPO1-202ENST00000503084 BTG4Q9NY30 223 aa17.77■□□□□ 0.44
TNPO1-202ENST00000503084 SPATA31A5Q5VU36 1347 aa17.76■□□□□ 0.43
TNPO1-202ENST00000503084 SPATA31A7Q8IWB4 1347 aa17.76■□□□□ 0.43
TNPO1-202ENST00000503084 FAM50AQ14320 339 aaKnown RBP17.76■□□□□ 0.43
TNPO1-202ENST00000503084 NBPF8Q3BBV2 869 aa17.76■□□□□ 0.43
TNPO1-202ENST00000503084 NBPF14Q5TI25 921 aa17.76■□□□□ 0.43
TNPO1-202ENST00000503084 COL14A1Q05707 1796 aaKnown RBP17.76■□□□□ 0.43
TNPO1-202ENST00000503084 MYOM1P52179 1685 aa17.75■□□□□ 0.43
TNPO1-202ENST00000503084 ARHGEF10O15013 1369 aa17.75■□□□□ 0.43
TNPO1-202ENST00000503084 KIF1BO60333 1816 aa17.74■□□□□ 0.43
TNPO1-202ENST00000503084 CHD4Q14839 1912 aa17.74■□□□□ 0.43
TNPO1-202ENST00000503084 LMOD2Q6P5Q4 547 aa17.73■□□□□ 0.43
TNPO1-202ENST00000503084 FAM196AQ6ZSG2 479 aa17.73■□□□□ 0.43
TNPO1-202ENST00000503084 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
TNPO1-202ENST00000503084 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
TNPO1-202ENST00000503084 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
TNPO1-202ENST00000503084 PLEKHH1Q9ULM0 1364 aa17.71■□□□□ 0.43
TNPO1-202ENST00000503084 TECPR2O15040 1411 aa17.71■□□□□ 0.43
TNPO1-202ENST00000503084 VGFO15240 615 aaPredicted RBP17.7■□□□□ 0.42
TNPO1-202ENST00000503084 WAPLQ7Z5K2 1190 aa17.7■□□□□ 0.42
TNPO1-202ENST00000503084 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
TNPO1-202ENST00000503084 RGPD8O14715 1765 aaPredicted RBP17.69■□□□□ 0.42
TNPO1-202ENST00000503084 PSME1Q06323 249 aa17.69■□□□□ 0.42
TNPO1-202ENST00000503084 IFT172Q9UG01 1749 aa17.69■□□□□ 0.42
TNPO1-202ENST00000503084 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
TNPO1-202ENST00000503084 PHF8Q9UPP1 1060 aa17.68■□□□□ 0.42
TNPO1-202ENST00000503084 PPLO60437 1756 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms