RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TRIM52Q96A61 297 aa9.17□□□□□ -0.94
LSM3P4-201ENST00000502948 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.17□□□□□ -0.94
LSM3P4-201ENST00000502948 FMN2Q9NZ56 1722 aa9.17□□□□□ -0.94
LSM3P4-201ENST00000502948 KIF1AQ12756 1690 aa9.16□□□□□ -0.94
LSM3P4-201ENST00000502948 PXDNQ92626 1479 aa9.16□□□□□ -0.94
LSM3P4-201ENST00000502948 NRXN1Q9ULB1 1477 aa9.16□□□□□ -0.94
LSM3P4-201ENST00000502948 NPHP3Q7Z494 1330 aa9.16□□□□□ -0.94
LSM3P4-201ENST00000502948 NGLY1Q96IV0 654 aa9.16□□□□□ -0.94
LSM3P4-201ENST00000502948 MYOM2P54296 1465 aa9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 RGS12O14924 1447 aa9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 NUTM2BA6NNL0 878 aaPredicted RBP9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 NUTM2EB1AL46 878 aaPredicted RBP9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 NUTM2AQ8IVF1 878 aaPredicted RBP9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 ORAI2Q96SN7 254 aa9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.94
LSM3P4-201ENST00000502948 MPHOSPH9Q99550 1183 aa9.14□□□□□ -0.95
LSM3P4-201ENST00000502948 ATRNO75882 1429 aa9.14□□□□□ -0.95
LSM3P4-201ENST00000502948 ADGRF5Q8IZF2 1346 aa9.13□□□□□ -0.95
LSM3P4-201ENST00000502948 C8orf37Q96NL8 207 aa9.13□□□□□ -0.95
LSM3P4-201ENST00000502948 TRPC5Q9UL62 973 aaPredicted RBP9.13□□□□□ -0.95
LSM3P4-201ENST00000502948 YTHDC2Q9H6S0 1430 aaKnown RBP9.13□□□□□ -0.95
LSM3P4-201ENST00000502948 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
LSM3P4-201ENST00000502948 DDX17Q92841 729 aaKnown RBP9.12□□□□□ -0.95
LSM3P4-201ENST00000502948 BCL9LQ86UU0 1499 aa9.12□□□□□ -0.95
LSM3P4-201ENST00000502948 ATAD2Q6PL18 1390 aa9.12□□□□□ -0.95
LSM3P4-201ENST00000502948 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
LSM3P4-201ENST00000502948 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
LSM3P4-201ENST00000502948 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
LSM3P4-201ENST00000502948 C14orf93Q9H972 538 aaKnown RBP9.11□□□□□ -0.95
LSM3P4-201ENST00000502948 USP21Q9UK80 565 aa9.11□□□□□ -0.95
LSM3P4-201ENST00000502948 ADGRB2O60241 1585 aa9.11□□□□□ -0.95
LSM3P4-201ENST00000502948 NWD2Q9ULI1 1742 aa9.11□□□□□ -0.95
LSM3P4-201ENST00000502948 FOXD1Q16676 465 aa9.1□□□□□ -0.95
LSM3P4-201ENST00000502948 SLIT2O94813 1529 aa9.1□□□□□ -0.95
LSM3P4-201ENST00000502948 RGPD8O14715 1765 aaPredicted RBP9.09□□□□□ -0.95
LSM3P4-201ENST00000502948 USP32Q8NFA0 1604 aa9.09□□□□□ -0.95
LSM3P4-201ENST00000502948 ADAMTS2O95450 1211 aa9.09□□□□□ -0.95
LSM3P4-201ENST00000502948 DHX57Q6P158 1386 aaKnown RBP9.09□□□□□ -0.95
LSM3P4-201ENST00000502948 SPATA31A3Q5VYP0 1347 aa9.08□□□□□ -0.96
LSM3P4-201ENST00000502948 ANKARQ7Z5J8 1434 aa9.08□□□□□ -0.96
LSM3P4-201ENST00000502948 FOXO3O43524 673 aa9.08□□□□□ -0.96
LSM3P4-201ENST00000502948 HRCP23327 699 aa9.08□□□□□ -0.96
LSM3P4-201ENST00000502948 SBNO1A3KN83 1393 aa9.08□□□□□ -0.96
LSM3P4-201ENST00000502948 ABCA3Q99758 1704 aa9.08□□□□□ -0.96
LSM3P4-201ENST00000502948 ADGRB1O14514 1584 aa9.07□□□□□ -0.96
LSM3P4-201ENST00000502948 RGL3Q3MIN7 710 aa9.07□□□□□ -0.96
LSM3P4-201ENST00000502948 WAPLQ7Z5K2 1190 aa9.07□□□□□ -0.96
LSM3P4-201ENST00000502948 PLEKHH1Q9ULM0 1364 aa9.07□□□□□ -0.96
LSM3P4-201ENST00000502948 TNS3Q68CZ2 1445 aa9.06□□□□□ -0.96
LSM3P4-201ENST00000502948 PSME1Q06323 249 aa9.06□□□□□ -0.96
LSM3P4-201ENST00000502948 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
LSM3P4-201ENST00000502948 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
LSM3P4-201ENST00000502948 EIF3AQ14152 1382 aaKnown RBP9.06□□□□□ -0.96
LSM3P4-201ENST00000502948 GLI3P10071 1580 aa9.06□□□□□ -0.96
LSM3P4-201ENST00000502948 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
LSM3P4-201ENST00000502948 PLCH1Q4KWH8 1693 aa9.05□□□□□ -0.96
LSM3P4-201ENST00000502948 ARHGEF10O15013 1369 aa9.05□□□□□ -0.96
LSM3P4-201ENST00000502948 ONECUT3O60422 494 aaPredicted RBP9.05□□□□□ -0.96
LSM3P4-201ENST00000502948 TMEM132EQ6IEE7 984 aa9.05□□□□□ -0.96
LSM3P4-201ENST00000502948 ALS2Q96Q42 1657 aa9.04□□□□□ -0.96
LSM3P4-201ENST00000502948 RALGAPBQ86X10 1494 aa9.04□□□□□ -0.96
LSM3P4-201ENST00000502948 KRT28Q7Z3Y7 464 aa9.04□□□□□ -0.96
LSM3P4-201ENST00000502948 STK26Q9P289 416 aa9.04□□□□□ -0.96
LSM3P4-201ENST00000502948 PHF8Q9UPP1 1060 aa9.04□□□□□ -0.96
LSM3P4-201ENST00000502948 EP400Q96L91 3159 aa9.04□□□□□ -0.96
LSM3P4-201ENST00000502948 BRWD3Q6RI45 1802 aa9.03□□□□□ -0.96
LSM3P4-201ENST00000502948 ITSN1Q15811 1721 aa9.03□□□□□ -0.96
LSM3P4-201ENST00000502948 CRYBG1Q9Y4K1 1723 aa9.03□□□□□ -0.96
LSM3P4-201ENST00000502948 CFAP70Q5T0N1 1121 aa9.03□□□□□ -0.96
LSM3P4-201ENST00000502948 NRAPQ86VF7 1730 aa9.02□□□□□ -0.96
LSM3P4-201ENST00000502948 KIAA1210Q9ULL0 1709 aa9.02□□□□□ -0.96
LSM3P4-201ENST00000502948 RAB3GAP2Q9H2M9 1393 aa9.02□□□□□ -0.97
LSM3P4-201ENST00000502948 TULP4Q9NRJ4 1543 aa9.02□□□□□ -0.97
LSM3P4-201ENST00000502948 VPS72Q15906 364 aa9.02□□□□□ -0.97
LSM3P4-201ENST00000502948 BLMP54132 1417 aaPredicted RBP9.02□□□□□ -0.97
LSM3P4-201ENST00000502948 COL14A1Q05707 1796 aaKnown RBP9.01□□□□□ -0.97
LSM3P4-201ENST00000502948 ARHGEF28Q8N1W1 1705 aaKnown RBP9.01□□□□□ -0.97
LSM3P4-201ENST00000502948 PRAM1Q96QH2 718 aa9.01□□□□□ -0.97
LSM3P4-201ENST00000502948 XPCQ01831 940 aaPredicted RBP9□□□□□ -0.97
LSM3P4-201ENST00000502948 ZRANB1Q9UGI0 708 aa9□□□□□ -0.97
LSM3P4-201ENST00000502948 NUTM2FA1L443 756 aa8.99□□□□□ -0.97
LSM3P4-201ENST00000502948 WASLO00401 505 aaPredicted RBP8.98□□□□□ -0.97
LSM3P4-201ENST00000502948 POGKQ9P215 609 aa8.98□□□□□ -0.97
LSM3P4-201ENST00000502948 GPRASP1Q5JY77 1395 aa8.98□□□□□ -0.97
LSM3P4-201ENST00000502948 TOPAZ1Q8N9V7 1692 aa8.97□□□□□ -0.97
LSM3P4-201ENST00000502948 ATP7BP35670 1465 aa8.97□□□□□ -0.97
LSM3P4-201ENST00000502948 LRP5O75197 1615 aa8.97□□□□□ -0.97
LSM3P4-201ENST00000502948 THSD7AQ9UPZ6 1657 aa8.97□□□□□ -0.97
LSM3P4-201ENST00000502948 RGPD1P0DJD0 1748 aa8.97□□□□□ -0.97
LSM3P4-201ENST00000502948 FAM83GA6ND36 823 aa8.96□□□□□ -0.98
LSM3P4-201ENST00000502948 HAP1P54257 671 aaPredicted RBP8.96□□□□□ -0.98
LSM3P4-201ENST00000502948 SEPT12Q8IYM1 358 aa8.96□□□□□ -0.98
LSM3P4-201ENST00000502948 PRR36Q9H6K5 1346 aa8.96□□□□□ -0.98
LSM3P4-201ENST00000502948 POLR3AO14802 1390 aaPredicted RBP8.96□□□□□ -0.98
LSM3P4-201ENST00000502948 PHRF1Q9P1Y6 1649 aaKnown RBP8.95□□□□□ -0.98
LSM3P4-201ENST00000502948 KRT27Q7Z3Y8 459 aa8.95□□□□□ -0.98
LSM3P4-201ENST00000502948 DCAF11Q8TEB1 546 aa8.95□□□□□ -0.98
LSM3P4-201ENST00000502948 TRAK1Q9UPV9 953 aa8.95□□□□□ -0.98
LSM3P4-201ENST00000502948 BRD4O60885 1362 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms