RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
ATXN3-206ENST00000502250 PCDHB15Q9Y5E8 787 aa12.65□□□□□ -0.38
ATXN3-206ENST00000502250 ITGBL1O95965 494 aaPredicted RBP12.64□□□□□ -0.39
ATXN3-206ENST00000502250 PPP2R2DQ66LE6 453 aa12.64□□□□□ -0.39
ATXN3-206ENST00000502250 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
ATXN3-206ENST00000502250 ZPR1O75312 459 aa12.63□□□□□ -0.39
ATXN3-206ENST00000502250 MTMR2Q13614 643 aa12.63□□□□□ -0.39
ATXN3-206ENST00000502250 BRICD5Q6PL45 260 aa12.63□□□□□ -0.39
ATXN3-206ENST00000502250 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
ATXN3-206ENST00000502250 QPCTQ16769 361 aa12.62□□□□□ -0.39
ATXN3-206ENST00000502250 HRCP23327 699 aa12.61□□□□□ -0.39
ATXN3-206ENST00000502250 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
ATXN3-206ENST00000502250 C6orf229H3BNL8 230 aa12.6□□□□□ -0.39
ATXN3-206ENST00000502250 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
ATXN3-206ENST00000502250 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
ATXN3-206ENST00000502250 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
ATXN3-206ENST00000502250 CABLES1Q8TDN4 633 aa12.58□□□□□ -0.4
ATXN3-206ENST00000502250 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
ATXN3-206ENST00000502250 NUTM2BA6NNL0 878 aaPredicted RBP12.57□□□□□ -0.4
ATXN3-206ENST00000502250 NUTM2EB1AL46 878 aaPredicted RBP12.57□□□□□ -0.4
ATXN3-206ENST00000502250 ADH1BP00325 375 aa12.57□□□□□ -0.4
ATXN3-206ENST00000502250 NUTM2DQ5VT03 806 aaPredicted RBP12.57□□□□□ -0.4
ATXN3-206ENST00000502250 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
ATXN3-206ENST00000502250 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
ATXN3-206ENST00000502250 KCNC4Q03721 635 aa12.56□□□□□ -0.4
ATXN3-206ENST00000502250 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
ATXN3-206ENST00000502250 SPSB2Q99619 263 aa12.56□□□□□ -0.4
ATXN3-206ENST00000502250 RFC5P40937 340 aa12.55□□□□□ -0.4
ATXN3-206ENST00000502250 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
ATXN3-206ENST00000502250 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
ATXN3-206ENST00000502250 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
ATXN3-206ENST00000502250 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
ATXN3-206ENST00000502250 TLL1O43897 1013 aa12.53□□□□□ -0.4
ATXN3-206ENST00000502250 TMEM259Q4ZIN3 620 aa12.53□□□□□ -0.4
ATXN3-206ENST00000502250 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
ATXN3-206ENST00000502250 PRR7Q8TB68 274 aa12.52□□□□□ -0.41
ATXN3-206ENST00000502250 CFAP99D6REC4 459 aa12.51□□□□□ -0.41
ATXN3-206ENST00000502250 FAM160A2Q8N612 972 aaPredicted RBP12.51□□□□□ -0.41
ATXN3-206ENST00000502250 BANK1Q8NDB2 785 aa12.5□□□□□ -0.41
ATXN3-206ENST00000502250 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
ATXN3-206ENST00000502250 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
ATXN3-206ENST00000502250 JUNDP17535 347 aa12.48□□□□□ -0.41
ATXN3-206ENST00000502250 MMP16P51512 607 aa12.48□□□□□ -0.41
ATXN3-206ENST00000502250 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
ATXN3-206ENST00000502250 DXOO77932 396 aaKnown RBP12.47□□□□□ -0.41
ATXN3-206ENST00000502250 SLC6A16Q9GZN6 736 aa12.47□□□□□ -0.41
ATXN3-206ENST00000502250 SOCS7O14512 581 aa12.45□□□□□ -0.42
ATXN3-206ENST00000502250 AP1G2O75843 785 aa12.44□□□□□ -0.42
ATXN3-206ENST00000502250 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
ATXN3-206ENST00000502250 PTPRNQ16849 979 aa12.43□□□□□ -0.42
ATXN3-206ENST00000502250 LYPD8Q6UX82 237 aa12.43□□□□□ -0.42
ATXN3-206ENST00000502250 PRDM9Q9NQV7 894 aa12.43□□□□□ -0.42
ATXN3-206ENST00000502250 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
ATXN3-206ENST00000502250 FLIIQ13045 1269 aa12.42□□□□□ -0.42
ATXN3-206ENST00000502250 S1PR4O95977 384 aa12.41□□□□□ -0.42
ATXN3-206ENST00000502250 GGCXP38435 758 aa12.41□□□□□ -0.42
ATXN3-206ENST00000502250 TSC1Q92574 1164 aa12.41□□□□□ -0.42
ATXN3-206ENST00000502250 PLA2G2EQ9NZK7 142 aa12.41□□□□□ -0.42
ATXN3-206ENST00000502250 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
ATXN3-206ENST00000502250 MCM6Q14566 821 aa12.39□□□□□ -0.43
ATXN3-206ENST00000502250 APBB1O00213 710 aa12.37□□□□□ -0.43
ATXN3-206ENST00000502250 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
ATXN3-206ENST00000502250 CCNYL3P0C7X3 344 aa12.37□□□□□ -0.43
ATXN3-206ENST00000502250 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
ATXN3-206ENST00000502250 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
ATXN3-206ENST00000502250 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
ATXN3-206ENST00000502250 ANKLE1Q8NAG6 615 aa12.35□□□□□ -0.43
ATXN3-206ENST00000502250 RNF223E7ERA6 249 aa12.34□□□□□ -0.43
ATXN3-206ENST00000502250 F12P00748 615 aaPredicted RBP12.34□□□□□ -0.43
ATXN3-206ENST00000502250 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
ATXN3-206ENST00000502250 LRRN4Q8WUT4 740 aa12.34□□□□□ -0.43
ATXN3-206ENST00000502250 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
ATXN3-206ENST00000502250 EVA1BQ9NVM1 165 aa12.34□□□□□ -0.43
ATXN3-206ENST00000502250 A0A0G2JS52 829 aa12.33□□□□□ -0.44
ATXN3-206ENST00000502250 FCF1Q9Y324 198 aaKnown RBP12.33□□□□□ -0.44
ATXN3-206ENST00000502250 HMX1Q9NP08 348 aaPredicted RBP12.31□□□□□ -0.44
ATXN3-206ENST00000502250 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
ATXN3-206ENST00000502250 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
ATXN3-206ENST00000502250 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
ATXN3-206ENST00000502250 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
ATXN3-206ENST00000502250 PPEF1O14829 653 aaPredicted RBP12.27□□□□□ -0.45
ATXN3-206ENST00000502250 MAP10Q9P2G4 905 aa12.27□□□□□ -0.45
ATXN3-206ENST00000502250 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
ATXN3-206ENST00000502250 PRM3Q9NNZ6 103 aa12.26□□□□□ -0.45
ATXN3-206ENST00000502250 CTHP32929 405 aa12.25□□□□□ -0.45
ATXN3-206ENST00000502250 NR6A1Q15406 480 aa12.25□□□□□ -0.45
ATXN3-206ENST00000502250 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
ATXN3-206ENST00000502250 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
ATXN3-206ENST00000502250 ARMC2Q8NEN0 867 aa12.24□□□□□ -0.45
ATXN3-206ENST00000502250 ZC3H4Q9UPT8 1303 aaKnown RBP12.24□□□□□ -0.45
ATXN3-206ENST00000502250 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
ATXN3-206ENST00000502250 PLA2G2CQ5R387 149 aa12.23□□□□□ -0.45
ATXN3-206ENST00000502250 PTCRAQ6ISU1 281 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-206ENST00000502250 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
ATXN3-206ENST00000502250 RPIAP49247 311 aa12.22□□□□□ -0.45
ATXN3-206ENST00000502250 EPS8L1Q8TE68 723 aa12.22□□□□□ -0.45
ATXN3-206ENST00000502250 GPKOWQ92917 476 aaPredicted RBP eCLIP12.21□□□□□ -0.45
ATXN3-206ENST00000502250 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.45
ATXN3-206ENST00000502250 ZBTB24O43167 697 aaPredicted RBP12.2□□□□□ -0.46
ATXN3-206ENST00000502250 RAD21O60216 631 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms