RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 TRAK1Q9UPV9 953 aa16.72■□□□□ 0.27
AFF3-215ENST00000498090 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
AFF3-215ENST00000498090 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
AFF3-215ENST00000498090 LRPPRCP42704 1394 aaKnown RBP16.71■□□□□ 0.27
AFF3-215ENST00000498090 NPHP4O75161 1426 aaPredicted RBP16.71■□□□□ 0.27
AFF3-215ENST00000498090 TESK2Q96S53 571 aa16.71■□□□□ 0.27
AFF3-215ENST00000498090 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
AFF3-215ENST00000498090 RNF123Q5XPI4 1314 aa16.71■□□□□ 0.27
AFF3-215ENST00000498090 EIF3AQ14152 1382 aaKnown RBP16.71■□□□□ 0.27
AFF3-215ENST00000498090 PTPRUQ92729 1446 aa16.71■□□□□ 0.27
AFF3-215ENST00000498090 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
AFF3-215ENST00000498090 INSRP06213 1382 aa16.69■□□□□ 0.26
AFF3-215ENST00000498090 STK26Q9P289 416 aa16.69■□□□□ 0.26
AFF3-215ENST00000498090 TBX22Q9Y458 520 aa16.69■□□□□ 0.26
AFF3-215ENST00000498090 DLC1Q96QB1 1528 aa16.69■□□□□ 0.26
AFF3-215ENST00000498090 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
AFF3-215ENST00000498090 KNDC1Q76NI1 1749 aa16.68■□□□□ 0.26
AFF3-215ENST00000498090 TECPR2O15040 1411 aa16.68■□□□□ 0.26
AFF3-215ENST00000498090 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
AFF3-215ENST00000498090 IRX6P78412 446 aaPredicted RBP16.67■□□□□ 0.26
AFF3-215ENST00000498090 CPS1P31327 1500 aa16.67■□□□□ 0.26
AFF3-215ENST00000498090 QRICH2Q9H0J4 1663 aa16.66■□□□□ 0.26
AFF3-215ENST00000498090 CENPJQ9HC77 1338 aaPredicted RBP16.66■□□□□ 0.26
AFF3-215ENST00000498090 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
AFF3-215ENST00000498090 PARD3Q8TEW0 1356 aa16.65■□□□□ 0.26
AFF3-215ENST00000498090 DISP3Q9P2K9 1392 aa16.65■□□□□ 0.26
AFF3-215ENST00000498090 XRN1Q8IZH2 1706 aaKnown RBP16.65■□□□□ 0.26
AFF3-215ENST00000498090 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
AFF3-215ENST00000498090 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.25
AFF3-215ENST00000498090 PIK3R4Q99570 1358 aa16.63■□□□□ 0.25
AFF3-215ENST00000498090 ROBO2Q9HCK4 1378 aa16.63■□□□□ 0.25
AFF3-215ENST00000498090 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
AFF3-215ENST00000498090 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
AFF3-215ENST00000498090 FAM135BQ49AJ0 1406 aa16.61■□□□□ 0.25
AFF3-215ENST00000498090 AMOTL2Q9Y2J4 779 aa16.61■□□□□ 0.25
AFF3-215ENST00000498090 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
AFF3-215ENST00000498090 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
AFF3-215ENST00000498090 SAFB2Q14151 953 aaKnown RBP eCLIP16.6■□□□□ 0.25
AFF3-215ENST00000498090 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
AFF3-215ENST00000498090 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
AFF3-215ENST00000498090 NWD1Q149M9 1564 aa16.59■□□□□ 0.25
AFF3-215ENST00000498090 TMF1P82094 1093 aa16.59■□□□□ 0.25
AFF3-215ENST00000498090 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
AFF3-215ENST00000498090 CHD2O14647 1828 aaKnown RBP16.59■□□□□ 0.25
AFF3-215ENST00000498090 SIRT1Q96EB6 747 aa16.59■□□□□ 0.25
AFF3-215ENST00000498090 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
AFF3-215ENST00000498090 PER1O15534 1290 aaPredicted RBP16.58■□□□□ 0.24
AFF3-215ENST00000498090 KCNA6P17658 529 aa16.58■□□□□ 0.24
AFF3-215ENST00000498090 POGKQ9P215 609 aa16.58■□□□□ 0.24
AFF3-215ENST00000498090 MINK1Q8N4C8 1332 aaPredicted RBP16.56■□□□□ 0.24
AFF3-215ENST00000498090 SLC24A1O60721 1099 aa16.56■□□□□ 0.24
AFF3-215ENST00000498090 CDCA8Q53HL2 280 aa16.56■□□□□ 0.24
AFF3-215ENST00000498090 B4GALNT3Q6L9W6 998 aa16.56■□□□□ 0.24
AFF3-215ENST00000498090 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.55■□□□□ 0.24
AFF3-215ENST00000498090 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
AFF3-215ENST00000498090 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
AFF3-215ENST00000498090 STRCP1A6NGW2 1772 aa16.52■□□□□ 0.24
AFF3-215ENST00000498090 MYOM1P52179 1685 aa16.52■□□□□ 0.24
AFF3-215ENST00000498090 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
AFF3-215ENST00000498090 CCDC136Q96JN2 1154 aa16.51■□□□□ 0.23
AFF3-215ENST00000498090 EVC2Q86UK5 1308 aa16.51■□□□□ 0.23
AFF3-215ENST00000498090 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
AFF3-215ENST00000498090 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
AFF3-215ENST00000498090 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
AFF3-215ENST00000498090 PANK3Q9H999 370 aa16.48■□□□□ 0.23
AFF3-215ENST00000498090 NALCNQ8IZF0 1738 aa16.48■□□□□ 0.23
AFF3-215ENST00000498090 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
AFF3-215ENST00000498090 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
AFF3-215ENST00000498090 RRP1P56182 461 aaKnown RBP16.46■□□□□ 0.23
AFF3-215ENST00000498090 CDK19Q9BWU1 502 aa16.46■□□□□ 0.23
AFF3-215ENST00000498090 ERICH6Q7L0X2 663 aa16.46■□□□□ 0.23
AFF3-215ENST00000498090 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
AFF3-215ENST00000498090 RCAN3Q9UKA8 241 aa16.46■□□□□ 0.23
AFF3-215ENST00000498090 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
AFF3-215ENST00000498090 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
AFF3-215ENST00000498090 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
AFF3-215ENST00000498090 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
AFF3-215ENST00000498090 ATP7BP35670 1465 aa16.44■□□□□ 0.22
AFF3-215ENST00000498090 MSH5O43196 834 aa16.43■□□□□ 0.22
AFF3-215ENST00000498090 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
AFF3-215ENST00000498090 ILDR1Q86SU0 546 aaPredicted RBP16.43■□□□□ 0.22
AFF3-215ENST00000498090 PRR36Q9H6K5 1346 aa16.43■□□□□ 0.22
AFF3-215ENST00000498090 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
AFF3-215ENST00000498090 PROSER2Q86WR7 435 aaPredicted RBP16.42■□□□□ 0.22
AFF3-215ENST00000498090 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
AFF3-215ENST00000498090 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
AFF3-215ENST00000498090 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
AFF3-215ENST00000498090 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
AFF3-215ENST00000498090 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
AFF3-215ENST00000498090 FMN2Q9NZ56 1722 aa16.41■□□□□ 0.22
AFF3-215ENST00000498090 SLC12A5Q9H2X9 1139 aa16.4■□□□□ 0.22
AFF3-215ENST00000498090 IQSEC2Q5JU85 1478 aa16.4■□□□□ 0.22
AFF3-215ENST00000498090 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
AFF3-215ENST00000498090 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
AFF3-215ENST00000498090 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
AFF3-215ENST00000498090 NUDT16Q96DE0 195 aaKnown RBP16.38■□□□□ 0.21
AFF3-215ENST00000498090 XIRP1Q702N8 1843 aaKnown RBP16.37■□□□□ 0.21
AFF3-215ENST00000498090 NUTM2FA1L443 756 aa16.37■□□□□ 0.21
AFF3-215ENST00000498090 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
AFF3-215ENST00000498090 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms