RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 DHX57Q6P158 1386 aaKnown RBP16.44■□□□□ 0.22
ERCC8-208ENST00000497892 ADGRF5Q8IZF2 1346 aa16.44■□□□□ 0.22
ERCC8-208ENST00000497892 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
ERCC8-208ENST00000497892 ASXL1Q8IXJ9 1541 aa16.41■□□□□ 0.22
ERCC8-208ENST00000497892 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
ERCC8-208ENST00000497892 PROSER2Q86WR7 435 aaPredicted RBP16.39■□□□□ 0.21
ERCC8-208ENST00000497892 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
ERCC8-208ENST00000497892 PTCH1Q13635 1447 aa16.38■□□□□ 0.21
ERCC8-208ENST00000497892 NCOA3Q9Y6Q9 1424 aa16.38■□□□□ 0.21
ERCC8-208ENST00000497892 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
ERCC8-208ENST00000497892 PRR29P0C7W0 189 aa16.37■□□□□ 0.21
ERCC8-208ENST00000497892 TOM1O60784 492 aa16.35■□□□□ 0.21
ERCC8-208ENST00000497892 RBM33Q96EV2 1170 aaKnown RBP16.35■□□□□ 0.21
ERCC8-208ENST00000497892 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
ERCC8-208ENST00000497892 NALCNQ8IZF0 1738 aa16.35■□□□□ 0.21
ERCC8-208ENST00000497892 TECPR2O15040 1411 aa16.35■□□□□ 0.21
ERCC8-208ENST00000497892 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.34■□□□□ 0.21
ERCC8-208ENST00000497892 DCAF11Q8TEB1 546 aa16.34■□□□□ 0.21
ERCC8-208ENST00000497892 MSH6P52701 1360 aa16.34■□□□□ 0.21
ERCC8-208ENST00000497892 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.2
ERCC8-208ENST00000497892 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
ERCC8-208ENST00000497892 LRPPRCP42704 1394 aaKnown RBP16.32■□□□□ 0.2
ERCC8-208ENST00000497892 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
ERCC8-208ENST00000497892 ROBO2Q9HCK4 1378 aa16.32■□□□□ 0.2
ERCC8-208ENST00000497892 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
ERCC8-208ENST00000497892 DCCP43146 1447 aa16.31■□□□□ 0.2
ERCC8-208ENST00000497892 YTHDC2Q9H6S0 1430 aaKnown RBP16.31■□□□□ 0.2
ERCC8-208ENST00000497892 ADGRL3Q9HAR2 1447 aa16.31■□□□□ 0.2
ERCC8-208ENST00000497892 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
ERCC8-208ENST00000497892 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
ERCC8-208ENST00000497892 SIN3AQ96ST3 1273 aa16.3■□□□□ 0.2
ERCC8-208ENST00000497892 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
ERCC8-208ENST00000497892 EVX2Q03828 476 aa16.29■□□□□ 0.2
ERCC8-208ENST00000497892 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
ERCC8-208ENST00000497892 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
ERCC8-208ENST00000497892 KDM2AQ9Y2K7 1162 aa16.29■□□□□ 0.2
ERCC8-208ENST00000497892 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
ERCC8-208ENST00000497892 TMEM132EQ6IEE7 984 aa16.28■□□□□ 0.2
ERCC8-208ENST00000497892 C19orf44Q9H6X5 657 aa16.28■□□□□ 0.2
ERCC8-208ENST00000497892 ROBO1Q9Y6N7 1651 aa16.27■□□□□ 0.2
ERCC8-208ENST00000497892 DLC1Q96QB1 1528 aa16.27■□□□□ 0.2
ERCC8-208ENST00000497892 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
ERCC8-208ENST00000497892 FAM135BQ49AJ0 1406 aa16.26■□□□□ 0.19
ERCC8-208ENST00000497892 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
ERCC8-208ENST00000497892 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
ERCC8-208ENST00000497892 STK26Q9P289 416 aa16.25■□□□□ 0.19
ERCC8-208ENST00000497892 CADPS2Q86UW7 1296 aa16.24■□□□□ 0.19
ERCC8-208ENST00000497892 ARHGEF28Q8N1W1 1705 aaKnown RBP16.23■□□□□ 0.19
ERCC8-208ENST00000497892 MST1RQ04912 1400 aa16.23■□□□□ 0.19
ERCC8-208ENST00000497892 ATF3P18847 181 aa16.23■□□□□ 0.19
ERCC8-208ENST00000497892 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
ERCC8-208ENST00000497892 C19orf67A6NJJ6 358 aa16.22■□□□□ 0.19
ERCC8-208ENST00000497892 SLAIN2Q9P270 581 aa16.22■□□□□ 0.19
ERCC8-208ENST00000497892 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
ERCC8-208ENST00000497892 SIRT1Q96EB6 747 aa16.21■□□□□ 0.19
ERCC8-208ENST00000497892 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
ERCC8-208ENST00000497892 ADGRB2O60241 1585 aa16.2■□□□□ 0.18
ERCC8-208ENST00000497892 HSPA1LP34931 641 aa16.19■□□□□ 0.18
ERCC8-208ENST00000497892 WAPLQ7Z5K2 1190 aa16.19■□□□□ 0.18
ERCC8-208ENST00000497892 FMN2Q9NZ56 1722 aa16.19■□□□□ 0.18
ERCC8-208ENST00000497892 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
ERCC8-208ENST00000497892 AHDC1Q5TGY3 1603 aaPredicted RBP16.17■□□□□ 0.18
ERCC8-208ENST00000497892 PHLPP1O60346 1717 aa16.16■□□□□ 0.18
ERCC8-208ENST00000497892 NHSL1Q5SYE7 1610 aa16.16■□□□□ 0.18
ERCC8-208ENST00000497892 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
ERCC8-208ENST00000497892 C1orf167Q5SNV9 1468 aa16.16■□□□□ 0.18
ERCC8-208ENST00000497892 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
ERCC8-208ENST00000497892 TRAK1Q9UPV9 953 aa16.15■□□□□ 0.18
ERCC8-208ENST00000497892 NBPF1Q3BBV0 1214 aa16.14■□□□□ 0.17
ERCC8-208ENST00000497892 BRINP3Q76B58 766 aa16.13■□□□□ 0.17
ERCC8-208ENST00000497892 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
ERCC8-208ENST00000497892 POGKQ9P215 609 aa16.12■□□□□ 0.17
ERCC8-208ENST00000497892 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.174e-6■■■■□ 19.5
ERCC8-208ENST00000497892 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
ERCC8-208ENST00000497892 QRICH2Q9H0J4 1663 aa16.11■□□□□ 0.17
ERCC8-208ENST00000497892 ROCK2O75116 1388 aaKnown RBP16.11■□□□□ 0.17
ERCC8-208ENST00000497892 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
ERCC8-208ENST00000497892 NBPF8Q3BBV2 869 aa16.1■□□□□ 0.17
ERCC8-208ENST00000497892 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
ERCC8-208ENST00000497892 KIF1AQ12756 1690 aa16.1■□□□□ 0.17
ERCC8-208ENST00000497892 RGPD8O14715 1765 aaPredicted RBP16.1■□□□□ 0.17
ERCC8-208ENST00000497892 ANKARQ7Z5J8 1434 aa16.08■□□□□ 0.16
ERCC8-208ENST00000497892 TULP4Q9NRJ4 1543 aa16.08■□□□□ 0.16
ERCC8-208ENST00000497892 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
ERCC8-208ENST00000497892 ORAI2Q96SN7 254 aa16.07■□□□□ 0.16
ERCC8-208ENST00000497892 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
ERCC8-208ENST00000497892 SHPRHQ149N8 1683 aa16.07■□□□□ 0.16
ERCC8-208ENST00000497892 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
ERCC8-208ENST00000497892 TIMELESSQ9UNS1 1208 aa16.06■□□□□ 0.16
ERCC8-208ENST00000497892 ITSN1Q15811 1721 aa16.05■□□□□ 0.16
ERCC8-208ENST00000497892 MED1Q15648 1581 aaPredicted RBP16.05■□□□□ 0.16
ERCC8-208ENST00000497892 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
ERCC8-208ENST00000497892 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
ERCC8-208ENST00000497892 HIRIP3Q9BW71 556 aaPredicted RBP16.04■□□□□ 0.16
ERCC8-208ENST00000497892 TOPAZ1Q8N9V7 1692 aa16.04■□□□□ 0.16
ERCC8-208ENST00000497892 JCADQ9P266 1359 aa16.03■□□□□ 0.16
ERCC8-208ENST00000497892 WASLO00401 505 aaPredicted RBP16.03■□□□□ 0.16
ERCC8-208ENST00000497892 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
ERCC8-208ENST00000497892 ATP7BP35670 1465 aa16.03■□□□□ 0.16
ERCC8-208ENST00000497892 PXDNQ92626 1479 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms