RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
VPS26A-209ENST00000497564 ATF3P18847 181 aa19.89■□□□□ 0.77
VPS26A-209ENST00000497564 PTCH1Q13635 1447 aa19.89■□□□□ 0.77
VPS26A-209ENST00000497564 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.77
VPS26A-209ENST00000497564 ADGRL3Q9HAR2 1447 aa19.88■□□□□ 0.77
VPS26A-209ENST00000497564 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
VPS26A-209ENST00000497564 CADPS2Q86UW7 1296 aa19.87■□□□□ 0.77
VPS26A-209ENST00000497564 QRICH2Q9H0J4 1663 aa19.87■□□□□ 0.77
VPS26A-209ENST00000497564 STK26Q9P289 416 aa19.86■□□□□ 0.77
VPS26A-209ENST00000497564 DCCP43146 1447 aa19.85■□□□□ 0.77
VPS26A-209ENST00000497564 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
VPS26A-209ENST00000497564 MED1Q15648 1581 aaPredicted RBP19.85■□□□□ 0.77
VPS26A-209ENST00000497564 MST1RQ04912 1400 aa19.85■□□□□ 0.77
VPS26A-209ENST00000497564 LRPPRCP42704 1394 aaKnown RBP19.83■□□□□ 0.77
VPS26A-209ENST00000497564 CCDC7Q96M83 1385 aa19.83■□□□□ 0.76
VPS26A-209ENST00000497564 DLC1Q96QB1 1528 aa19.82■□□□□ 0.76
VPS26A-209ENST00000497564 BRINP3Q76B58 766 aa19.82■□□□□ 0.76
VPS26A-209ENST00000497564 WAPLQ7Z5K2 1190 aa19.82■□□□□ 0.76
VPS26A-209ENST00000497564 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
VPS26A-209ENST00000497564 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
VPS26A-209ENST00000497564 SBNO2Q9Y2G9 1366 aa19.82■□□□□ 0.76
VPS26A-209ENST00000497564 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
VPS26A-209ENST00000497564 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
VPS26A-209ENST00000497564 ILDR2Q71H61 639 aa19.81■□□□□ 0.76
VPS26A-209ENST00000497564 TECPR2O15040 1411 aa19.81■□□□□ 0.76
VPS26A-209ENST00000497564 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
VPS26A-209ENST00000497564 TESK2Q96S53 571 aa19.8■□□□□ 0.76
VPS26A-209ENST00000497564 ABCC11Q96J66 1382 aa19.8■□□□□ 0.76
VPS26A-209ENST00000497564 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
VPS26A-209ENST00000497564 C11orf95C9JLR9 678 aaPredicted RBP19.79■□□□□ 0.76
VPS26A-209ENST00000497564 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
VPS26A-209ENST00000497564 AHDC1Q5TGY3 1603 aaPredicted RBP19.77■□□□□ 0.76
VPS26A-209ENST00000497564 SLC24A1O60721 1099 aa19.77■□□□□ 0.76
VPS26A-209ENST00000497564 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
VPS26A-209ENST00000497564 DDX17Q92841 729 aaKnown RBP19.76■□□□□ 0.75
VPS26A-209ENST00000497564 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
VPS26A-209ENST00000497564 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
VPS26A-209ENST00000497564 TRAK1Q9UPV9 953 aa19.73■□□□□ 0.75
VPS26A-209ENST00000497564 MYOM1P52179 1685 aa19.72■□□□□ 0.75
VPS26A-209ENST00000497564 TMF1P82094 1093 aa19.72■□□□□ 0.75
VPS26A-209ENST00000497564 CDC42BPGQ6DT37 1551 aa19.72■□□□□ 0.75
VPS26A-209ENST00000497564 NHSL1Q5SYE7 1610 aa19.72■□□□□ 0.75
VPS26A-209ENST00000497564 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
VPS26A-209ENST00000497564 JCADQ9P266 1359 aa19.7■□□□□ 0.74
VPS26A-209ENST00000497564 NUTM2FA1L443 756 aa19.7■□□□□ 0.74
VPS26A-209ENST00000497564 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
VPS26A-209ENST00000497564 PRAM1Q96QH2 718 aa19.7■□□□□ 0.74
VPS26A-209ENST00000497564 SIRT1Q96EB6 747 aa19.69■□□□□ 0.74
VPS26A-209ENST00000497564 CDCA8Q53HL2 280 aa19.68■□□□□ 0.74
VPS26A-209ENST00000497564 TULP4Q9NRJ4 1543 aa19.67■□□□□ 0.74
VPS26A-209ENST00000497564 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
VPS26A-209ENST00000497564 RGS17Q9UGC6 210 aaPredicted RBP19.66■□□□□ 0.74
VPS26A-209ENST00000497564 LRP6O75581 1613 aa19.65■□□□□ 0.74
VPS26A-209ENST00000497564 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
VPS26A-209ENST00000497564 ADGRB2O60241 1585 aa19.64■□□□□ 0.73
VPS26A-209ENST00000497564 SHPRHQ149N8 1683 aa19.64■□□□□ 0.73
VPS26A-209ENST00000497564 ESCO1Q5FWF5 840 aa19.63■□□□□ 0.73
VPS26A-209ENST00000497564 PUS7Q96PZ0 661 aaKnown RBP19.63■□□□□ 0.73
VPS26A-209ENST00000497564 POGKQ9P215 609 aa19.63■□□□□ 0.73
VPS26A-209ENST00000497564 SOS2Q07890 1332 aaPredicted RBP19.6■□□□□ 0.73
VPS26A-209ENST00000497564 XPCQ01831 940 aaPredicted RBP19.6■□□□□ 0.73
VPS26A-209ENST00000497564 RGPD8O14715 1765 aaPredicted RBP19.6■□□□□ 0.73
VPS26A-209ENST00000497564 EVC2Q86UK5 1308 aa19.59■□□□□ 0.73
VPS26A-209ENST00000497564 MINK1Q8N4C8 1332 aaPredicted RBP19.59■□□□□ 0.73
VPS26A-209ENST00000497564 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
VPS26A-209ENST00000497564 SPATA31A6Q5VVP1 1343 aa19.58■□□□□ 0.73
VPS26A-209ENST00000497564 NUTM2BA6NNL0 878 aaPredicted RBP19.58■□□□□ 0.72
VPS26A-209ENST00000497564 NUTM2EB1AL46 878 aaPredicted RBP19.58■□□□□ 0.72
VPS26A-209ENST00000497564 FOXO3O43524 673 aa19.58■□□□□ 0.72
VPS26A-209ENST00000497564 NUTM2AQ8IVF1 878 aaPredicted RBP19.58■□□□□ 0.72
VPS26A-209ENST00000497564 LRRC59Q96AG4 307 aaKnown RBP19.58■□□□□ 0.72
VPS26A-209ENST00000497564 PXDNQ92626 1479 aa19.57■□□□□ 0.72
VPS26A-209ENST00000497564 POLR3GLQ9BT43 218 aa19.57■□□□□ 0.72
VPS26A-209ENST00000497564 USP32Q8NFA0 1604 aa19.57■□□□□ 0.72
VPS26A-209ENST00000497564 POTEAQ6S8J7 498 aa19.55■□□□□ 0.72
VPS26A-209ENST00000497564 NPHP3Q7Z494 1330 aa19.54■□□□□ 0.72
VPS26A-209ENST00000497564 PRR36Q9H6K5 1346 aa19.53■□□□□ 0.72
VPS26A-209ENST00000497564 ITSN1Q15811 1721 aa19.52■□□□□ 0.72
VPS26A-209ENST00000497564 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
VPS26A-209ENST00000497564 TOPAZ1Q8N9V7 1692 aa19.52■□□□□ 0.71
VPS26A-209ENST00000497564 MEX3CQ5U5Q3 659 aaKnown RBP19.51■□□□□ 0.71
VPS26A-209ENST00000497564 MIER1Q8N108 512 aa19.51■□□□□ 0.71
VPS26A-209ENST00000497564 PHF8Q9UPP1 1060 aa19.51■□□□□ 0.71
VPS26A-209ENST00000497564 ATAD2Q6PL18 1390 aa19.51■□□□□ 0.71
VPS26A-209ENST00000497564 KIF1AQ12756 1690 aa19.51■□□□□ 0.71
VPS26A-209ENST00000497564 WASLO00401 505 aaPredicted RBP19.5■□□□□ 0.71
VPS26A-209ENST00000497564 SOCS7O14512 581 aa19.5■□□□□ 0.71
VPS26A-209ENST00000497564 ANKARQ7Z5J8 1434 aa19.5■□□□□ 0.71
VPS26A-209ENST00000497564 PMFBP1Q8TBY8 1022 aa19.49■□□□□ 0.71
VPS26A-209ENST00000497564 AKAP12Q02952 1782 aa19.48■□□□□ 0.71
VPS26A-209ENST00000497564 ANP32CO43423 234 aa19.48■□□□□ 0.71
VPS26A-209ENST00000497564 PER1O15534 1290 aaPredicted RBP19.47■□□□□ 0.71
VPS26A-209ENST00000497564 ADAMTS2O95450 1211 aa19.47■□□□□ 0.71
VPS26A-209ENST00000497564 KRT28Q7Z3Y7 464 aa19.47■□□□□ 0.71
VPS26A-209ENST00000497564 CDK19Q9BWU1 502 aa19.47■□□□□ 0.71
VPS26A-209ENST00000497564 COL22A1Q8NFW1 1626 aaPredicted RBP19.47■□□□□ 0.71
VPS26A-209ENST00000497564 PANK3Q9H999 370 aa19.46■□□□□ 0.71
VPS26A-209ENST00000497564 SRPK2P78362 688 aaKnown RBP19.45■□□□□ 0.7
VPS26A-209ENST00000497564 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
VPS26A-209ENST00000497564 ATP7BP35670 1465 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms