RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 NINLQ9Y2I6 1382 aa15.46■□□□□ 0.07
SNRNP200-208ENST00000497539 ZMYM3Q14202 1370 aa15.46■□□□□ 0.06
SNRNP200-208ENST00000497539 YTHDC2Q9H6S0 1430 aaKnown RBP15.46■□□□□ 0.06
SNRNP200-208ENST00000497539 PPP4R2Q9NY27 417 aa15.45■□□□□ 0.06
SNRNP200-208ENST00000497539 RIMS2Q9UQ26 1411 aa15.45■□□□□ 0.06
SNRNP200-208ENST00000497539 SENP3-EIF4A1A0A087X0R7 540 aa15.44■□□□□ 0.06
SNRNP200-208ENST00000497539 TRAK1Q9UPV9 953 aa15.42■□□□□ 0.06
SNRNP200-208ENST00000497539 CC2D1BQ5T0F9 858 aaKnown RBP15.42■□□□□ 0.06
SNRNP200-208ENST00000497539 NLRP1Q9C000 1473 aa15.42■□□□□ 0.06
SNRNP200-208ENST00000497539 PPP2R1AP30153 589 aa15.41■□□□□ 0.06
SNRNP200-208ENST00000497539 ARXQ96QS3 562 aa15.41■□□□□ 0.06
SNRNP200-208ENST00000497539 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
SNRNP200-208ENST00000497539 TMEM132EQ6IEE7 984 aa15.41■□□□□ 0.06
SNRNP200-208ENST00000497539 TNRQ92752 1358 aa15.41■□□□□ 0.06
SNRNP200-208ENST00000497539 ANKRD26Q9UPS8 1709 aa15.4■□□□□ 0.06
SNRNP200-208ENST00000497539 NSD2O96028 1365 aa15.4■□□□□ 0.06
SNRNP200-208ENST00000497539 ANKRD36BQ8N2N9 1353 aa15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 RNF123Q5XPI4 1314 aa15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 TECPR2O15040 1411 aa15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 PDIA4P13667 645 aaKnown RBP15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 CARD14Q9BXL6 1004 aa15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 C3P01024 1663 aa15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 CPS1P31327 1500 aa15.39■□□□□ 0.05
SNRNP200-208ENST00000497539 FER1L4A9Z1Z3 1794 aa15.38■□□□□ 0.05
SNRNP200-208ENST00000497539 PDE4CQ08493 712 aa15.38■□□□□ 0.05
SNRNP200-208ENST00000497539 PDE3BQ13370 1112 aa15.38■□□□□ 0.05
SNRNP200-208ENST00000497539 ABCC11Q96J66 1382 aa15.37■□□□□ 0.05
SNRNP200-208ENST00000497539 MED14O60244 1454 aa15.37■□□□□ 0.05
SNRNP200-208ENST00000497539 NSD3Q9BZ95 1437 aa15.37■□□□□ 0.05
SNRNP200-208ENST00000497539 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
SNRNP200-208ENST00000497539 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
SNRNP200-208ENST00000497539 POLR3AO14802 1390 aaPredicted RBP15.35■□□□□ 0.05
SNRNP200-208ENST00000497539 SIRT1Q96EB6 747 aa15.35■□□□□ 0.05
SNRNP200-208ENST00000497539 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.35■□□□□ 0.05
SNRNP200-208ENST00000497539 SLIT1O75093 1534 aa15.35■□□□□ 0.05
SNRNP200-208ENST00000497539 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
SNRNP200-208ENST00000497539 NBR1Q14596 966 aa15.34■□□□□ 0.05
SNRNP200-208ENST00000497539 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
SNRNP200-208ENST00000497539 ESF1Q9H501 851 aaKnown RBP15.34■□□□□ 0.05
SNRNP200-208ENST00000497539 TMEM2Q9UHN6 1383 aa15.34■□□□□ 0.05
SNRNP200-208ENST00000497539 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.05
SNRNP200-208ENST00000497539 CD163L1Q9NR16 1453 aa15.33■□□□□ 0.04
SNRNP200-208ENST00000497539 ADGRB2O60241 1585 aa15.33■□□□□ 0.04
SNRNP200-208ENST00000497539 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
SNRNP200-208ENST00000497539 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.04
SNRNP200-208ENST00000497539 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
SNRNP200-208ENST00000497539 HDGFP51858 240 aaKnown RBP15.32■□□□□ 0.04
SNRNP200-208ENST00000497539 MLECQ14165 292 aa15.32■□□□□ 0.04
SNRNP200-208ENST00000497539 FGD1P98174 961 aa15.31■□□□□ 0.04
SNRNP200-208ENST00000497539 KIF20BQ96Q89 1820 aa15.31■□□□□ 0.04
SNRNP200-208ENST00000497539 ATP7BP35670 1465 aa15.31■□□□□ 0.04
SNRNP200-208ENST00000497539 DIP2AQ14689 1571 aa15.31■□□□□ 0.04
SNRNP200-208ENST00000497539 CGNL1Q0VF96 1302 aa15.31■□□□□ 0.04
SNRNP200-208ENST00000497539 PLEKHG1Q9ULL1 1385 aa15.3■□□□□ 0.04
SNRNP200-208ENST00000497539 SLC12A5Q9H2X9 1139 aa15.29■□□□□ 0.04
SNRNP200-208ENST00000497539 PRAM1Q96QH2 718 aa15.29■□□□□ 0.04
SNRNP200-208ENST00000497539 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
SNRNP200-208ENST00000497539 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
SNRNP200-208ENST00000497539 A0A1W2PP64 1363 aa15.27■□□□□ 0.04
SNRNP200-208ENST00000497539 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
SNRNP200-208ENST00000497539 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
SNRNP200-208ENST00000497539 NOP58Q9Y2X3 529 aaKnown RBP15.26■□□□□ 0.03
SNRNP200-208ENST00000497539 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNRNP200-208ENST00000497539 METP08581 1390 aa15.26■□□□□ 0.03
SNRNP200-208ENST00000497539 MON2Q7Z3U7 1717 aa15.25■□□□□ 0.03
SNRNP200-208ENST00000497539 ZNF142P52746 1687 aaPredicted RBP15.25■□□□□ 0.03
SNRNP200-208ENST00000497539 TOPAZ1Q8N9V7 1692 aa15.25■□□□□ 0.03
SNRNP200-208ENST00000497539 CDC42BPGQ6DT37 1551 aa15.25■□□□□ 0.03
SNRNP200-208ENST00000497539 AKAP12Q02952 1782 aa15.25■□□□□ 0.03
SNRNP200-208ENST00000497539 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
SNRNP200-208ENST00000497539 POGKQ9P215 609 aa15.24■□□□□ 0.03
SNRNP200-208ENST00000497539 STK26Q9P289 416 aa15.24■□□□□ 0.03
SNRNP200-208ENST00000497539 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
SNRNP200-208ENST00000497539 GLIPR1L2Q4G1C9 344 aa15.23■□□□□ 0.03
SNRNP200-208ENST00000497539 ZMYND15Q9H091 742 aa15.23■□□□□ 0.03
SNRNP200-208ENST00000497539 MORC1Q86VD1 984 aa15.22■□□□□ 0.03
SNRNP200-208ENST00000497539 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
SNRNP200-208ENST00000497539 ADAMTSL3P82987 1691 aa15.22■□□□□ 0.03
SNRNP200-208ENST00000497539 PLEKHH1Q9ULM0 1364 aa15.22■□□□□ 0.03
SNRNP200-208ENST00000497539 COL3A1P02461 1466 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-208ENST00000497539 RIMS1Q86UR5 1692 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-208ENST00000497539 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-208ENST00000497539 CDK19Q9BWU1 502 aa15.21■□□□□ 0.03
SNRNP200-208ENST00000497539 MINK1Q8N4C8 1332 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-208ENST00000497539 XRN1Q8IZH2 1706 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-208ENST00000497539 ITSN1Q15811 1721 aa15.21■□□□□ 0.02
SNRNP200-208ENST00000497539 SRPK2P78362 688 aaKnown RBP15.2■□□□□ 0.02
SNRNP200-208ENST00000497539 PTCH1Q13635 1447 aa15.2■□□□□ 0.02
SNRNP200-208ENST00000497539 CEP170BQ9Y4F5 1589 aaPredicted RBP15.19■□□□□ 0.02
SNRNP200-208ENST00000497539 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.19■□□□□ 0.02
SNRNP200-208ENST00000497539 NRKQ7Z2Y5 1582 aa15.19■□□□□ 0.02
SNRNP200-208ENST00000497539 AAMPQ13685 434 aa15.18■□□□□ 0.02
SNRNP200-208ENST00000497539 HDGFL2Q7Z4V5 671 aaPredicted RBP15.17■□□□□ 0.02
SNRNP200-208ENST00000497539 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
SNRNP200-208ENST00000497539 WASLO00401 505 aaPredicted RBP15.17■□□□□ 0.02
SNRNP200-208ENST00000497539 TRMT2AQ8IZ69 625 aaKnown RBP15.17■□□□□ 0.02
SNRNP200-208ENST00000497539 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNRNP200-208ENST00000497539 PNPLA6Q8IY17 1366 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms