RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 PPP1R1BQ9UD71 204 aaPredicted RBP22.82■■□□□ 1.24
RNF220-218ENST00000497469 A0A0G2JS52 829 aa22.81■■□□□ 1.24
RNF220-218ENST00000497469 MYT1Q01538 1121 aa22.81■■□□□ 1.24
RNF220-218ENST00000497469 EZH2Q15910 746 aaKnown RBP22.81■■□□□ 1.24
RNF220-218ENST00000497469 XPCQ01831 940 aaPredicted RBP22.8■■□□□ 1.24
RNF220-218ENST00000497469 CCDC9Q9Y3X0 531 aaKnown RBP22.8■■□□□ 1.24
RNF220-218ENST00000497469 FAM182BQ5T319 152 aa22.79■■□□□ 1.24
RNF220-218ENST00000497469 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
RNF220-218ENST00000497469 METP08581 1390 aa22.77■■□□□ 1.24
RNF220-218ENST00000497469 RGPD1P0DJD0 1748 aa22.77■■□□□ 1.24
RNF220-218ENST00000497469 RPRD2Q5VT52 1461 aaKnown RBP22.77■■□□□ 1.24
RNF220-218ENST00000497469 MYOM3Q5VTT5 1437 aa22.75■■□□□ 1.23
RNF220-218ENST00000497469 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
RNF220-218ENST00000497469 VPS72Q15906 364 aa22.73■■□□□ 1.23
RNF220-218ENST00000497469 NINLQ9Y2I6 1382 aa22.73■■□□□ 1.23
RNF220-218ENST00000497469 CEP350Q5VT06 3117 aa22.73■■□□□ 1.23
RNF220-218ENST00000497469 PXDNQ92626 1479 aa22.73■■□□□ 1.23
RNF220-218ENST00000497469 TNS1Q9HBL0 1735 aaKnown RBP22.72■■□□□ 1.23
RNF220-218ENST00000497469 ONECUT3O60422 494 aaPredicted RBP22.72■■□□□ 1.23
RNF220-218ENST00000497469 ABCC5O15440 1437 aa22.72■■□□□ 1.23
RNF220-218ENST00000497469 DISP2A7MBM2 1401 aa22.7■■□□□ 1.22
RNF220-218ENST00000497469 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
RNF220-218ENST00000497469 NPHP3Q7Z494 1330 aa22.68■■□□□ 1.22
RNF220-218ENST00000497469 USP32Q8NFA0 1604 aa22.68■■□□□ 1.22
RNF220-218ENST00000497469 UTRNP46939 3433 aa22.67■■□□□ 1.22
RNF220-218ENST00000497469 FAM98CQ17RN3 349 aaKnown RBP22.67■■□□□ 1.22
RNF220-218ENST00000497469 PLEKHG5O94827 1062 aa22.66■■□□□ 1.22
RNF220-218ENST00000497469 CAMKK2Q96RR4 588 aa22.66■■□□□ 1.22
RNF220-218ENST00000497469 SPON1Q9HCB6 807 aa22.66■■□□□ 1.22
RNF220-218ENST00000497469 CHIC2Q9UKJ5 165 aa22.66■■□□□ 1.22
RNF220-218ENST00000497469 PLCH1Q4KWH8 1693 aa22.65■■□□□ 1.22
RNF220-218ENST00000497469 FOXO3O43524 673 aa22.64■■□□□ 1.21
RNF220-218ENST00000497469 ESCO1Q5FWF5 840 aa22.64■■□□□ 1.21
RNF220-218ENST00000497469 ADGRL2O95490 1459 aa22.63■■□□□ 1.21
RNF220-218ENST00000497469 KCNQ2O43526 872 aa22.62■■□□□ 1.21
RNF220-218ENST00000497469 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
RNF220-218ENST00000497469 DAPK1P53355 1430 aa22.59■■□□□ 1.21
RNF220-218ENST00000497469 TRIM37O94972 964 aa22.58■■□□□ 1.21
RNF220-218ENST00000497469 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
RNF220-218ENST00000497469 ROBO2Q9HCK4 1378 aa22.58■■□□□ 1.21
RNF220-218ENST00000497469 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
RNF220-218ENST00000497469 CABLES1Q8TDN4 633 aa22.57■■□□□ 1.2
RNF220-218ENST00000497469 ANKRD30AQ9BXX3 1397 aa22.56■■□□□ 1.2
RNF220-218ENST00000497469 GIGYF1O75420 1035 aaPredicted RBP22.56■■□□□ 1.2
RNF220-218ENST00000497469 NWD2Q9ULI1 1742 aa22.56■■□□□ 1.2
RNF220-218ENST00000497469 RREB1Q92766 1687 aa22.55■■□□□ 1.2
RNF220-218ENST00000497469 APBA3O96018 575 aa22.55■■□□□ 1.2
RNF220-218ENST00000497469 NRKQ7Z2Y5 1582 aa22.53■■□□□ 1.2
RNF220-218ENST00000497469 NUTM2FA1L443 756 aa22.52■■□□□ 1.2
RNF220-218ENST00000497469 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
RNF220-218ENST00000497469 NBPF14Q5TI25 921 aa22.52■■□□□ 1.2
RNF220-218ENST00000497469 SPATA31A3Q5VYP0 1347 aa22.52■■□□□ 1.2
RNF220-218ENST00000497469 E9PCH4 1651 aa22.52■■□□□ 1.2
RNF220-218ENST00000497469 PARD3Q8TEW0 1356 aa22.5■■□□□ 1.19
RNF220-218ENST00000497469 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
RNF220-218ENST00000497469 IQGAP3Q86VI3 1631 aa22.49■■□□□ 1.19
RNF220-218ENST00000497469 KANK4Q5T7N3 995 aaPredicted RBP22.48■■□□□ 1.19
RNF220-218ENST00000497469 NRAPQ86VF7 1730 aa22.48■■□□□ 1.19
RNF220-218ENST00000497469 LRPPRCP42704 1394 aaKnown RBP22.47■■□□□ 1.19
RNF220-218ENST00000497469 MYOM1P52179 1685 aa22.46■■□□□ 1.19
RNF220-218ENST00000497469 CHD4Q14839 1912 aa22.45■■□□□ 1.18
RNF220-218ENST00000497469 FAM83GA6ND36 823 aa22.45■■□□□ 1.18
RNF220-218ENST00000497469 THSD7AQ9UPZ6 1657 aa22.44■■□□□ 1.18
RNF220-218ENST00000497469 ABCA3Q99758 1704 aa22.43■■□□□ 1.18
RNF220-218ENST00000497469 CDC42BPGQ6DT37 1551 aa22.43■■□□□ 1.18
RNF220-218ENST00000497469 BTG4Q9NY30 223 aa22.41■■□□□ 1.18
RNF220-218ENST00000497469 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
RNF220-218ENST00000497469 FAM196AQ6ZSG2 479 aa22.39■■□□□ 1.17
RNF220-218ENST00000497469 KRT28Q7Z3Y7 464 aa22.39■■□□□ 1.17
RNF220-218ENST00000497469 PDGFDQ9GZP0 370 aaPredicted RBP22.39■■□□□ 1.17
RNF220-218ENST00000497469 TNS3Q68CZ2 1445 aa22.39■■□□□ 1.17
RNF220-218ENST00000497469 ZBTB7AO95365 584 aa22.38■■□□□ 1.17
RNF220-218ENST00000497469 LMOD2Q6P5Q4 547 aa22.38■■□□□ 1.17
RNF220-218ENST00000497469 HFM1A2PYH4 1435 aa22.38■■□□□ 1.17
RNF220-218ENST00000497469 CCDC144AA2RUR9 1427 aa22.38■■□□□ 1.17
RNF220-218ENST00000497469 FHDC1Q9C0D6 1143 aaPredicted RBP22.37■■□□□ 1.17
RNF220-218ENST00000497469 SPATA31A5Q5VU36 1347 aa22.36■■□□□ 1.17
RNF220-218ENST00000497469 SPATA31A7Q8IWB4 1347 aa22.36■■□□□ 1.17
RNF220-218ENST00000497469 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
RNF220-218ENST00000497469 CASZ1Q86V15 1759 aa22.35■■□□□ 1.17
RNF220-218ENST00000497469 CAPN15O75808 1086 aa22.35■■□□□ 1.17
RNF220-218ENST00000497469 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
RNF220-218ENST00000497469 NAIPQ13075 1403 aa22.33■■□□□ 1.17
RNF220-218ENST00000497469 PTGER2P43116 358 aa22.33■■□□□ 1.17
RNF220-218ENST00000497469 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.17
RNF220-218ENST00000497469 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
RNF220-218ENST00000497469 PRAG1Q86YV5 1406 aa22.31■■□□□ 1.16
RNF220-218ENST00000497469 KIF1AQ12756 1690 aa22.3■■□□□ 1.16
RNF220-218ENST00000497469 SHANK3Q9BYB0 1731 aa22.28■■□□□ 1.16
RNF220-218ENST00000497469 COL14A1Q05707 1796 aaKnown RBP22.26■■□□□ 1.15
RNF220-218ENST00000497469 DLC1Q96QB1 1528 aa22.26■■□□□ 1.15
RNF220-218ENST00000497469 PSME1Q06323 249 aa22.22■■□□□ 1.15
RNF220-218ENST00000497469 WAPLQ7Z5K2 1190 aa22.22■■□□□ 1.15
RNF220-218ENST00000497469 ARHGEF10O15013 1369 aa22.22■■□□□ 1.15
RNF220-218ENST00000497469 FMN2Q9NZ56 1722 aa22.21■■□□□ 1.15
RNF220-218ENST00000497469 GPR162Q16538 588 aa22.21■■□□□ 1.15
RNF220-218ENST00000497469 HSPA6P17066 643 aa22.2■■□□□ 1.14
RNF220-218ENST00000497469 SPATA31A1Q5TZJ5 1347 aa22.2■■□□□ 1.14
RNF220-218ENST00000497469 RRBP1Q9P2E9 1410 aaKnown RBP22.2■■□□□ 1.14
RNF220-218ENST00000497469 PDE3BQ13370 1112 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms