RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 POLR3EQ9NVU0 708 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 ACIN1Q9UKV3 1341 aaKnown RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 RAD54L2Q9Y4B4 1467 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 SENP3-EIF4A1A0A087X0R7 540 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 MAP3K7O43318 606 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 WASHC4Q2M389 1173 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 TSR1Q2NL82 804 aaKnown RBP4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 AEBP1Q8IUX7 1158 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 ADAMTS19Q8TE59 1207 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 CALR3Q96L12 384 aaKnown RBP4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 EYA1Q99502 592 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 GDPD2Q9HCC8 539 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 POLA1P09884 1462 aaPredicted RBP4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 NUP160Q12769 1436 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 TMEM88BA6NKF7 163 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 POM121CA8CG34 1229 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 ATG7O95352 703 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 C6orf132Q5T0Z8 1188 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 PADI6Q6TGC4 694 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 ALG2Q9H553 416 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 BCORL1Q5H9F3 1711 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 WDR97A6NE52 1622 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 DNMBPQ6XZF7 1577 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 PLB1Q6P1J6 1458 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SOGA1O94964 1423 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 ASXL2Q76L83 1435 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 G3V3G9 751 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 TOM1O60784 492 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 YY1P25490 414 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SOX11P35716 441 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 PRSS12P56730 875 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 ELOAQ14241 798 aaKnown RBP4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SND1Q7KZF4 910 aaKnown RBP eCLIP4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SULF1Q8IWU6 871 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 RBM46Q8TBY0 533 aaKnown RBP4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 TBC1D2BQ9UPU7 963 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 NDUFB9Q9Y6M9 179 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 KIAA0586Q9BVV6 1533 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 MAP3K4Q9Y6R4 1608 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 USP17L8P0C7I0 530 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 PLCG2P16885 1265 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 ZNF710Q8N1W2 664 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 PPP1R12CQ9BZL4 782 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 RIMS1Q86UR5 1692 aaKnown RBP4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 CFAP43Q8NDM7 1665 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 ARID4BQ4LE39 1312 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 SETBP1Q9Y6X0 1596 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 LOC105371045A0A1W2PR82 267 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 USP46P62068 366 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 QPCTQ16769 361 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 TRIM34Q9BYJ4 488 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 PCDHGA4Q9Y5G9 962 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 GRIN2AQ12879 1464 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 EPRSP07814 1512 aaKnown RBP4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 RBM47A0AV96 593 aaKnown RBP4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 POTEFA5A3E0 1075 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 E9PSI1 815 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 IGSF3O75054 1194 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 ERCC3P19447 782 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZDHHC16Q969W1 377 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 CDCA7LQ96GN5 454 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 TMEM134Q9H6X4 195 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 RCCD1A6NED2 376 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 MOXD2PA6NHM9 499 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 CSB-PGBD3P0DP91 1061 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 DNAJB2P25686 324 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 CCDC27Q2M243 656 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 FAM161AQ3B820 660 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 RTL5Q5HYW3 569 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 HDGFL1Q5TGJ6 251 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 UCN2Q96RP3 112 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 FAM198AQ9UFP1 575 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 COLQQ9Y215 455 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 PALM3A6NDB9 673 aaPredicted RBP4□□□□□ -1.77
CKS1BP2-201ENST00000497342 ABL2P42684 1182 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 FOXD4L5Q5VV16 416 aaPredicted RBP4□□□□□ -1.77
CKS1BP2-201ENST00000497342 B4GALNT3Q6L9W6 998 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 TXNDC2Q86VQ3 553 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 NFATC2IPQ8NCF5 419 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 NLRP7Q8WX94 980 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 FOXD4L4Q8WXT5 416 aaPredicted RBP4□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZBTB3Q9H5J0 574 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 VRTNQ9H8Y1 702 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZSWIM6Q9HCJ5 1215 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 PCDHB15Q9Y5E8 787 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 HOXA2O43364 376 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZNF428Q96B54 188 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 ADAM33Q9BZ11 813 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 BCL2L12Q9HB09 334 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 MAFBQ9Y5Q3 323 aaPredicted RBP3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 PREX1Q8TCU6 1659 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 ABCC2Q92887 1545 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 PPP1R3GB7ZBB8 358 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 AP1G2O75843 785 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 C7P10643 843 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 GCGRP47871 477 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 RBM25P49756 843 aaKnown RBP3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 C1QTNF8P60827 252 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms