RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PUS10Q3MIT2 529 aaKnown RBP6.74□□□□□ -1.33
EXOSC3-208ENST00000496910 KMT5BQ4FZB7 885 aa6.74□□□□□ -1.33
EXOSC3-208ENST00000496910 CYB5RLQ6IPT4 315 aa6.74□□□□□ -1.33
EXOSC3-208ENST00000496910 NECTIN2Q92692 538 aa6.74□□□□□ -1.33
EXOSC3-208ENST00000496910 PCMTD1Q96MG8 357 aaPredicted RBP6.74□□□□□ -1.33
EXOSC3-208ENST00000496910 FDX1P10109 184 aa6.73□□□□□ -1.33
EXOSC3-208ENST00000496910 ERICH6Q7L0X2 663 aa6.73□□□□□ -1.33
EXOSC3-208ENST00000496910 THAP11Q96EK4 314 aa6.73□□□□□ -1.33
EXOSC3-208ENST00000496910 SLC27A5Q9Y2P5 690 aa6.73□□□□□ -1.33
EXOSC3-208ENST00000496910 RTL5Q5HYW3 569 aaPredicted RBP6.72□□□□□ -1.33
EXOSC3-208ENST00000496910 PRPF38BQ5VTL8 546 aaKnown RBP6.72□□□□□ -1.33
EXOSC3-208ENST00000496910 BLOC1S3Q6QNY0 202 aa6.72□□□□□ -1.33
EXOSC3-208ENST00000496910 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
EXOSC3-208ENST00000496910 PRR14Q9BWN1 585 aa6.72□□□□□ -1.33
EXOSC3-208ENST00000496910 RB1CC1Q8TDY2 1594 aa6.72□□□□□ -1.33
EXOSC3-208ENST00000496910 HRCP23327 699 aa6.71□□□□□ -1.34
EXOSC3-208ENST00000496910 NYAP1Q6ZVC0 841 aa6.71□□□□□ -1.34
EXOSC3-208ENST00000496910 RNF166Q96A37 237 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-208ENST00000496910 RFC5P40937 340 aa6.7□□□□□ -1.34
EXOSC3-208ENST00000496910 MMRN1Q13201 1228 aa6.7□□□□□ -1.34
EXOSC3-208ENST00000496910 TJAP1Q5JTD0 557 aa6.7□□□□□ -1.34
EXOSC3-208ENST00000496910 RNF19BQ6ZMZ0 732 aa6.7□□□□□ -1.34
EXOSC3-208ENST00000496910 SYMPKQ92797 1274 aaKnown RBP6.7□□□□□ -1.34
EXOSC3-208ENST00000496910 PCDHB3Q9Y5E6 796 aa6.7□□□□□ -1.34
EXOSC3-208ENST00000496910 CFAP99D6REC4 459 aa6.69□□□□□ -1.34
EXOSC3-208ENST00000496910 PTPN5P54829 565 aa6.69□□□□□ -1.34
EXOSC3-208ENST00000496910 CSPP1Q1MSJ5 1256 aa6.69□□□□□ -1.34
EXOSC3-208ENST00000496910 BRICD5Q6PL45 260 aa6.69□□□□□ -1.34
EXOSC3-208ENST00000496910 SCUBE3Q8IX30 993 aa6.69□□□□□ -1.34
EXOSC3-208ENST00000496910 SALL2Q9Y467 1007 aaPredicted RBP6.69□□□□□ -1.34
EXOSC3-208ENST00000496910 UNC13AQ9UPW8 1703 aa6.68□□□□□ -1.34
EXOSC3-208ENST00000496910 GRIPAP1Q4V328 841 aa6.68□□□□□ -1.34
EXOSC3-208ENST00000496910 MTRQ99707 1265 aa6.68□□□□□ -1.34
EXOSC3-208ENST00000496910 ZBTB3Q9H5J0 574 aa6.68□□□□□ -1.34
EXOSC3-208ENST00000496910 MTMR2Q13614 643 aa6.67□□□□□ -1.34
EXOSC3-208ENST00000496910 COPS2P61201 443 aa6.66□□□□□ -1.34
EXOSC3-208ENST00000496910 MCM6Q14566 821 aa6.66□□□□□ -1.34
EXOSC3-208ENST00000496910 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
EXOSC3-208ENST00000496910 ARHGEF11O15085 1522 aa6.66□□□□□ -1.34
EXOSC3-208ENST00000496910 TLL1O43897 1013 aa6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 NR1I2O75469 434 aa6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 ITGBL1O95965 494 aaPredicted RBP6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 C14orf37Q86TY3 774 aa6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 RETREG3Q86VR2 466 aa6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 FAM160A2Q8N612 972 aaPredicted RBP6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 ZNF516Q92618 1163 aa6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 HCSTQ9UBK5 93 aa6.65□□□□□ -1.34
EXOSC3-208ENST00000496910 ZPR1O75312 459 aa6.64□□□□□ -1.35
EXOSC3-208ENST00000496910 Q3C1V9 767 aa6.64□□□□□ -1.35
EXOSC3-208ENST00000496910 SPDYE5A6NIY4 337 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 C6orf229H3BNL8 230 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 GPR37L1O60883 481 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 MSS51Q4VC12 460 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 MTMR14Q8NCE2 650 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 BANK1Q8NDB2 785 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 PRR7Q8TB68 274 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 USB1Q9BQ65 265 aaKnown RBP6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 IL21Q9HBE4 155 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 SNRKQ9NRH2 765 aa6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 BAZ1AQ9NRL2 1556 aaPredicted RBP6.63□□□□□ -1.35
EXOSC3-208ENST00000496910 BICRAQ9NZM4 1560 aa6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 PER1O15534 1290 aaPredicted RBP6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 FMNL1O95466 1100 aaPredicted RBP6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 CTDSPL2Q05D32 466 aa6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 TMEM259Q4ZIN3 620 aa6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 DESI1Q6ICB0 168 aa6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 NKX2-3Q8TAU0 364 aa6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 PRDM9Q9NQV7 894 aa6.62□□□□□ -1.35
EXOSC3-208ENST00000496910 NUTM2BA6NNL0 878 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 NUTM2EB1AL46 878 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 DXOO77932 396 aaKnown RBP6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 ADH1BP00325 375 aa6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 USP17L8P0C7I0 530 aa6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 MMP16P51512 607 aa6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 NUTM2DQ5VT03 806 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 NUTM2AQ8IVF1 878 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 SPSB2Q99619 263 aa6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 HMX1Q9NP08 348 aaPredicted RBP6.61□□□□□ -1.35
EXOSC3-208ENST00000496910 TRIM34Q9BYJ4 488 aa6.6□□□□□ -1.35
EXOSC3-208ENST00000496910 AP1G2O75843 785 aa6.59□□□□□ -1.35
EXOSC3-208ENST00000496910 JUNDP17535 347 aa6.59□□□□□ -1.35
EXOSC3-208ENST00000496910 FLIIQ13045 1269 aa6.59□□□□□ -1.35
EXOSC3-208ENST00000496910 LYPD8Q6UX82 237 aa6.59□□□□□ -1.35
EXOSC3-208ENST00000496910 LRRN4Q8WUT4 740 aa6.59□□□□□ -1.35
EXOSC3-208ENST00000496910 F12P00748 615 aaPredicted RBP6.58□□□□□ -1.36
EXOSC3-208ENST00000496910 PODXL2Q9NZ53 605 aa6.58□□□□□ -1.36
EXOSC3-208ENST00000496910 EPS8L1Q8TE68 723 aa6.57□□□□□ -1.36
EXOSC3-208ENST00000496910 POM121Q96HA1 1249 aa6.57□□□□□ -1.36
EXOSC3-208ENST00000496910 EIF4G1Q04637 1599 aaKnown RBP6.57□□□□□ -1.36
EXOSC3-208ENST00000496910 PTPRNQ16849 979 aa6.56□□□□□ -1.36
EXOSC3-208ENST00000496910 HELBQ8NG08 1087 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-208ENST00000496910 ATP1B4Q9UN42 357 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-208ENST00000496910 S1PR4O95977 384 aa6.55□□□□□ -1.36
EXOSC3-208ENST00000496910 RANGAP1P46060 587 aaPredicted RBP6.55□□□□□ -1.36
EXOSC3-208ENST00000496910 KCNC4Q03721 635 aa6.55□□□□□ -1.36
EXOSC3-208ENST00000496910 COG6Q9Y2V7 657 aa6.55□□□□□ -1.36
EXOSC3-208ENST00000496910 FNBP4Q8N3X1 1017 aaPredicted RBP6.54□□□□□ -1.36
EXOSC3-208ENST00000496910 CLUAP1Q96AJ1 413 aa6.54□□□□□ -1.36
EXOSC3-208ENST00000496910 SLC6A16Q9GZN6 736 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms