RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 FGD6Q6ZV73 1430 aa10.94□□□□□ -0.66
CHCHD3-206ENST00000496427 POTEFA5A3E0 1075 aa10.94□□□□□ -0.66
CHCHD3-206ENST00000496427 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
CHCHD3-206ENST00000496427 TRPC6Q9Y210 931 aa10.94□□□□□ -0.66
CHCHD3-206ENST00000496427 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.94□□□□□ -0.66
CHCHD3-206ENST00000496427 NOS1P29475 1434 aa10.93□□□□□ -0.66
CHCHD3-206ENST00000496427 E9PCH4 1651 aa10.93□□□□□ -0.66
CHCHD3-206ENST00000496427 IDI1Q13907 227 aa10.93□□□□□ -0.66
CHCHD3-206ENST00000496427 SHPRHQ149N8 1683 aa10.92□□□□□ -0.66
CHCHD3-206ENST00000496427 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
CHCHD3-206ENST00000496427 SEC24BO95487 1268 aa10.92□□□□□ -0.66
CHCHD3-206ENST00000496427 KCNA6P17658 529 aa10.92□□□□□ -0.66
CHCHD3-206ENST00000496427 IER5LQ5T953 404 aa10.92□□□□□ -0.66
CHCHD3-206ENST00000496427 PROSER2Q86WR7 435 aaPredicted RBP10.92□□□□□ -0.66
CHCHD3-206ENST00000496427 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
CHCHD3-206ENST00000496427 LRP6O75581 1613 aa10.91□□□□□ -0.66
CHCHD3-206ENST00000496427 UNC13BO14795 1591 aa10.9□□□□□ -0.66
CHCHD3-206ENST00000496427 ADGRL2O95490 1459 aa10.9□□□□□ -0.66
CHCHD3-206ENST00000496427 ZFYVE9O95405 1425 aa10.9□□□□□ -0.66
CHCHD3-206ENST00000496427 MSH6P52701 1360 aa10.9□□□□□ -0.67
CHCHD3-206ENST00000496427 ANKRD30AQ9BXX3 1397 aa10.9□□□□□ -0.67
CHCHD3-206ENST00000496427 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
CHCHD3-206ENST00000496427 PCDHB13Q9Y5F0 798 aa10.89□□□□□ -0.67
CHCHD3-206ENST00000496427 BCANQ96GW7 911 aa10.88□□□□□ -0.67
CHCHD3-206ENST00000496427 RIMS2Q9UQ26 1411 aa10.88□□□□□ -0.67
CHCHD3-206ENST00000496427 AHDC1Q5TGY3 1603 aaPredicted RBP10.87□□□□□ -0.67
CHCHD3-206ENST00000496427 JCADQ9P266 1359 aa10.87□□□□□ -0.67
CHCHD3-206ENST00000496427 PLEKHG1Q9ULL1 1385 aa10.87□□□□□ -0.67
CHCHD3-206ENST00000496427 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
CHCHD3-206ENST00000496427 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
CHCHD3-206ENST00000496427 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
CHCHD3-206ENST00000496427 IQGAP3Q86VI3 1631 aa10.86□□□□□ -0.67
CHCHD3-206ENST00000496427 NRXN3Q9Y4C0 1643 aa10.86□□□□□ -0.67
CHCHD3-206ENST00000496427 NHSL1Q5SYE7 1610 aa10.85□□□□□ -0.67
CHCHD3-206ENST00000496427 SPHKAPQ2M3C7 1700 aa10.85□□□□□ -0.67
CHCHD3-206ENST00000496427 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 NUBP1P53384 320 aa10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 NUTM2DQ5VT03 806 aaPredicted RBP10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 SLAIN2Q9P270 581 aa10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 NALCNQ8IZF0 1738 aa10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 ADAMTS13Q76LX8 1427 aa10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 ANKRD50Q9ULJ7 1429 aa10.84□□□□□ -0.67
CHCHD3-206ENST00000496427 PPP1R15AO75807 674 aaPredicted RBP10.83□□□□□ -0.68
CHCHD3-206ENST00000496427 TRPM2O94759 1503 aa10.83□□□□□ -0.68
CHCHD3-206ENST00000496427 CHGAP10645 457 aaKnown RBP10.82□□□□□ -0.68
CHCHD3-206ENST00000496427 SLC52A1Q9NWF4 448 aa10.82□□□□□ -0.68
CHCHD3-206ENST00000496427 FAM50AQ14320 339 aaKnown RBP10.81□□□□□ -0.68
CHCHD3-206ENST00000496427 TRIM52Q96A61 297 aa10.81□□□□□ -0.68
CHCHD3-206ENST00000496427 PTPRUQ92729 1446 aa10.81□□□□□ -0.68
CHCHD3-206ENST00000496427 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
CHCHD3-206ENST00000496427 C14orf37Q86TY3 774 aa10.8□□□□□ -0.68
CHCHD3-206ENST00000496427 ASXL1Q8IXJ9 1541 aa10.79□□□□□ -0.68
CHCHD3-206ENST00000496427 KIF1BO60333 1816 aa10.79□□□□□ -0.68
CHCHD3-206ENST00000496427 NCOA3Q9Y6Q9 1424 aa10.78□□□□□ -0.68
CHCHD3-206ENST00000496427 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
CHCHD3-206ENST00000496427 SPATA31A6Q5VVP1 1343 aa10.78□□□□□ -0.68
CHCHD3-206ENST00000496427 UPF1Q92900 1129 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHCHD3-206ENST00000496427 TBX22Q9Y458 520 aa10.77□□□□□ -0.69
CHCHD3-206ENST00000496427 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.69
CHCHD3-206ENST00000496427 CLTCL1P53675 1640 aa10.76□□□□□ -0.69
CHCHD3-206ENST00000496427 NUTM2BA6NNL0 878 aaPredicted RBP10.76□□□□□ -0.69
CHCHD3-206ENST00000496427 NUTM2EB1AL46 878 aaPredicted RBP10.76□□□□□ -0.69
CHCHD3-206ENST00000496427 NUTM2AQ8IVF1 878 aaPredicted RBP10.76□□□□□ -0.69
CHCHD3-206ENST00000496427 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
CHCHD3-206ENST00000496427 MST1RQ04912 1400 aa10.75□□□□□ -0.69
CHCHD3-206ENST00000496427 PLCG2P16885 1265 aa10.75□□□□□ -0.69
CHCHD3-206ENST00000496427 ATF3P18847 181 aa10.75□□□□□ -0.69
CHCHD3-206ENST00000496427 BRINP3Q76B58 766 aa10.75□□□□□ -0.69
CHCHD3-206ENST00000496427 PIK3R4Q99570 1358 aa10.75□□□□□ -0.69
CHCHD3-206ENST00000496427 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
CHCHD3-206ENST00000496427 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
CHCHD3-206ENST00000496427 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.74□□□□□ -0.69
CHCHD3-206ENST00000496427 AMOTL2Q9Y2J4 779 aa10.74□□□□□ -0.69
CHCHD3-206ENST00000496427 MARF1Q9Y4F3 1742 aaKnown RBP10.74□□□□□ -0.69
CHCHD3-206ENST00000496427 RGS12O14924 1447 aa10.74□□□□□ -0.69
CHCHD3-206ENST00000496427 NEXMIFQ5QGS0 1516 aa10.74□□□□□ -0.69
CHCHD3-206ENST00000496427 HDGFP51858 240 aaKnown RBP10.73□□□□□ -0.69
CHCHD3-206ENST00000496427 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
CHCHD3-206ENST00000496427 DDX17Q92841 729 aaKnown RBP10.73□□□□□ -0.69
CHCHD3-206ENST00000496427 C19orf44Q9H6X5 657 aa10.73□□□□□ -0.69
CHCHD3-206ENST00000496427 AFF2P51816 1311 aa10.73□□□□□ -0.69
CHCHD3-206ENST00000496427 DCCP43146 1447 aa10.73□□□□□ -0.69
CHCHD3-206ENST00000496427 CDK12Q9NYV4 1490 aaPredicted RBP10.73□□□□□ -0.69
CHCHD3-206ENST00000496427 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
CHCHD3-206ENST00000496427 LAMC1P11047 1609 aa10.72□□□□□ -0.69
CHCHD3-206ENST00000496427 RXRBP28702 533 aa10.71□□□□□ -0.69
CHCHD3-206ENST00000496427 CDAN1Q8IWY9 1227 aa10.71□□□□□ -0.69
CHCHD3-206ENST00000496427 PPLO60437 1756 aa10.7□□□□□ -0.7
CHCHD3-206ENST00000496427 ADGRL3Q9HAR2 1447 aa10.7□□□□□ -0.7
CHCHD3-206ENST00000496427 NUP155O75694 1391 aa10.7□□□□□ -0.7
CHCHD3-206ENST00000496427 METP08581 1390 aa10.7□□□□□ -0.7
CHCHD3-206ENST00000496427 ROCK1Q13464 1354 aa10.69□□□□□ -0.7
CHCHD3-206ENST00000496427 PNPLA6Q8IY17 1366 aa10.69□□□□□ -0.7
CHCHD3-206ENST00000496427 ITGAEP38570 1179 aa10.69□□□□□ -0.7
CHCHD3-206ENST00000496427 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
CHCHD3-206ENST00000496427 C8orf37Q96NL8 207 aa10.68□□□□□ -0.7
CHCHD3-206ENST00000496427 COL22A1Q8NFW1 1626 aaPredicted RBP10.68□□□□□ -0.7
CHCHD3-206ENST00000496427 FKBP8Q14318 412 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms