RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.54
VPS13B-206ENST00000496144 MINK1Q8N4C8 1332 aaPredicted RBP11.71□□□□□ -0.54
VPS13B-206ENST00000496144 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
VPS13B-206ENST00000496144 PDE3BQ13370 1112 aa11.7□□□□□ -0.54
VPS13B-206ENST00000496144 AFF2P51816 1311 aa11.7□□□□□ -0.54
VPS13B-206ENST00000496144 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
VPS13B-206ENST00000496144 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
VPS13B-206ENST00000496144 TMC1Q8TDI8 760 aa11.69□□□□□ -0.54
VPS13B-206ENST00000496144 CCER2I3L3R5 266 aa11.69□□□□□ -0.54
VPS13B-206ENST00000496144 LTBP4Q8N2S1 1624 aa11.68□□□□□ -0.54
VPS13B-206ENST00000496144 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
VPS13B-206ENST00000496144 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
VPS13B-206ENST00000496144 RALGAPBQ86X10 1494 aa11.68□□□□□ -0.54
VPS13B-206ENST00000496144 DCCP43146 1447 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 TRPM1Q7Z4N2 1603 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 FOXO3O43524 673 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 BAG6P46379 1132 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 TMEM132EQ6IEE7 984 aa11.67□□□□□ -0.54
VPS13B-206ENST00000496144 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
VPS13B-206ENST00000496144 C11orf95C9JLR9 678 aaPredicted RBP11.66□□□□□ -0.54
VPS13B-206ENST00000496144 XPCQ01831 940 aaPredicted RBP11.66□□□□□ -0.54
VPS13B-206ENST00000496144 BRINP3Q76B58 766 aa11.66□□□□□ -0.54
VPS13B-206ENST00000496144 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.548e-7■■■□□ 16.1
VPS13B-206ENST00000496144 STRCQ7RTU9 1775 aa11.66□□□□□ -0.54
VPS13B-206ENST00000496144 LAMC1P11047 1609 aa11.66□□□□□ -0.54
VPS13B-206ENST00000496144 EVC2Q86UK5 1308 aa11.66□□□□□ -0.54
VPS13B-206ENST00000496144 UBR1Q8IWV7 1749 aa11.66□□□□□ -0.54
VPS13B-206ENST00000496144 ANP32CO43423 234 aa11.65□□□□□ -0.54
VPS13B-206ENST00000496144 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
VPS13B-206ENST00000496144 NBPF14Q5TI25 921 aa11.65□□□□□ -0.54
VPS13B-206ENST00000496144 SIGLEC1Q9BZZ2 1709 aa11.65□□□□□ -0.54
VPS13B-206ENST00000496144 NLRP13Q86W25 1043 aa11.65□□□□□ -0.55
VPS13B-206ENST00000496144 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.55
VPS13B-206ENST00000496144 CCDC7Q96M83 1385 aa11.64□□□□□ -0.55
VPS13B-206ENST00000496144 PMFBP1Q8TBY8 1022 aa11.63□□□□□ -0.55
VPS13B-206ENST00000496144 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
VPS13B-206ENST00000496144 KIF1BO60333 1816 aa11.63□□□□□ -0.55
VPS13B-206ENST00000496144 E9PCH4 1651 aa11.63□□□□□ -0.55
VPS13B-206ENST00000496144 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
VPS13B-206ENST00000496144 TERF2IPQ9NYB0 399 aa11.62□□□□□ -0.55
VPS13B-206ENST00000496144 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
VPS13B-206ENST00000496144 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
VPS13B-206ENST00000496144 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
VPS13B-206ENST00000496144 SPHKAPQ2M3C7 1700 aa11.61□□□□□ -0.55
VPS13B-206ENST00000496144 CFAP70Q5T0N1 1121 aa11.61□□□□□ -0.55
VPS13B-206ENST00000496144 ABTB2Q8N961 1025 aa11.61□□□□□ -0.55
VPS13B-206ENST00000496144 SIRT1Q96EB6 747 aa11.61□□□□□ -0.55
VPS13B-206ENST00000496144 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
VPS13B-206ENST00000496144 ROCK2O75116 1388 aaKnown RBP11.6□□□□□ -0.55
VPS13B-206ENST00000496144 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
VPS13B-206ENST00000496144 KDM5AP29375 1690 aaKnown RBP11.6□□□□□ -0.55
VPS13B-206ENST00000496144 NEURL4Q96JN8 1562 aa11.59□□□□□ -0.55
VPS13B-206ENST00000496144 PHLPP1O60346 1717 aa11.59□□□□□ -0.55
VPS13B-206ENST00000496144 CENPJQ9HC77 1338 aaPredicted RBP11.59□□□□□ -0.55
VPS13B-206ENST00000496144 ADGRF5Q8IZF2 1346 aa11.58□□□□□ -0.56
VPS13B-206ENST00000496144 ILDR2Q71H61 639 aa11.58□□□□□ -0.56
VPS13B-206ENST00000496144 USP47Q96K76 1375 aa11.58□□□□□ -0.56
VPS13B-206ENST00000496144 ZFYVE9O95405 1425 aa11.58□□□□□ -0.56
VPS13B-206ENST00000496144 SOX12O15370 315 aa11.58□□□□□ -0.56
VPS13B-206ENST00000496144 UNC5CLQ8IV45 518 aa11.58□□□□□ -0.56
VPS13B-206ENST00000496144 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
VPS13B-206ENST00000496144 ORAI2Q96SN7 254 aa11.57□□□□□ -0.56
VPS13B-206ENST00000496144 WASLO00401 505 aaPredicted RBP11.57□□□□□ -0.56
VPS13B-206ENST00000496144 ZNF692Q9BU19 519 aaPredicted RBP11.57□□□□□ -0.56
VPS13B-206ENST00000496144 CDK19Q9BWU1 502 aa11.57□□□□□ -0.56
VPS13B-206ENST00000496144 YTHDC2Q9H6S0 1430 aaKnown RBP11.56□□□□□ -0.56
VPS13B-206ENST00000496144 MROH1Q8NDA8 1641 aa11.56□□□□□ -0.56
VPS13B-206ENST00000496144 NEFMP07197 916 aa11.56□□□□□ -0.56
VPS13B-206ENST00000496144 METP08581 1390 aa11.56□□□□□ -0.56
VPS13B-206ENST00000496144 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
VPS13B-206ENST00000496144 PRAG1Q86YV5 1406 aa11.56□□□□□ -0.56
VPS13B-206ENST00000496144 KCNH5Q8NCM2 988 aa11.56□□□□□ -0.56
VPS13B-206ENST00000496144 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
VPS13B-206ENST00000496144 TOM1L2Q6ZVM7 507 aa11.55□□□□□ -0.56
VPS13B-206ENST00000496144 NLRP6P59044 892 aa11.55□□□□□ -0.56
VPS13B-206ENST00000496144 ABCC11Q96J66 1382 aa11.55□□□□□ -0.56
VPS13B-206ENST00000496144 CLTCL1P53675 1640 aa11.55□□□□□ -0.56
VPS13B-206ENST00000496144 NPM2Q86SE8 214 aaKnown RBP11.54□□□□□ -0.56
VPS13B-206ENST00000496144 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
VPS13B-206ENST00000496144 TMF1P82094 1093 aa11.53□□□□□ -0.56
VPS13B-206ENST00000496144 KRT27Q7Z3Y8 459 aa11.53□□□□□ -0.56
VPS13B-206ENST00000496144 C1orf167Q5SNV9 1468 aa11.53□□□□□ -0.56
VPS13B-206ENST00000496144 DDX17Q92841 729 aaKnown RBP11.53□□□□□ -0.56
VPS13B-206ENST00000496144 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
VPS13B-206ENST00000496144 ADAMTS13Q76LX8 1427 aa11.52□□□□□ -0.56
VPS13B-206ENST00000496144 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.57
VPS13B-206ENST00000496144 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.57
VPS13B-206ENST00000496144 IFT172Q9UG01 1749 aa11.52□□□□□ -0.57
VPS13B-206ENST00000496144 AMPHP49418 695 aa11.52□□□□□ -0.57
VPS13B-206ENST00000496144 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
VPS13B-206ENST00000496144 TMEM131LA2VDJ0 1609 aa11.51□□□□□ -0.57
VPS13B-206ENST00000496144 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
VPS13B-206ENST00000496144 BTG4Q9NY30 223 aa11.51□□□□□ -0.57
VPS13B-206ENST00000496144 POTEAQ6S8J7 498 aa11.51□□□□□ -0.57
VPS13B-206ENST00000496144 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
VPS13B-206ENST00000496144 KIAA1210Q9ULL0 1709 aa11.5□□□□□ -0.57
VPS13B-206ENST00000496144 PNPLA6Q8IY17 1366 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms