RNA–Protein interactions for RNA: ENST00000496120.6

PBX1-210, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-210ENST00000496120 AMOTL2Q9Y2J4 779 aa30.27■■■□□ 2.44
PBX1-210ENST00000496120 CCDC7Q96M83 1385 aa30.26■■■□□ 2.43
PBX1-210ENST00000496120 C11orf95C9JLR9 678 aaPredicted RBP30.25■■■□□ 2.43
PBX1-210ENST00000496120 CFAP70Q5T0N1 1121 aa30.25■■■□□ 2.43
PBX1-210ENST00000496120 POTEAQ6S8J7 498 aa30.25■■■□□ 2.43
PBX1-210ENST00000496120 CADPS2Q86UW7 1296 aa30.25■■■□□ 2.43
PBX1-210ENST00000496120 AHDC1Q5TGY3 1603 aaPredicted RBP30.24■■■□□ 2.43
PBX1-210ENST00000496120 ST20-MTHFSA0A0A6YYL1 179 aa30.24■■■□□ 2.43
PBX1-210ENST00000496120 DDX10Q13206 875 aaKnown RBP30.24■■■□□ 2.43
PBX1-210ENST00000496120 ADGRB1O14514 1584 aa30.22■■■□□ 2.43
PBX1-210ENST00000496120 C14orf93Q9H972 538 aaKnown RBP30.22■■■□□ 2.43
PBX1-210ENST00000496120 ATF3P18847 181 aa30.21■■■□□ 2.43
PBX1-210ENST00000496120 KIF7Q2M1P5 1343 aa30.19■■■□□ 2.42
PBX1-210ENST00000496120 DCCP43146 1447 aa30.19■■■□□ 2.42
PBX1-210ENST00000496120 SHPRHQ149N8 1683 aa30.16■■■□□ 2.42
PBX1-210ENST00000496120 METP08581 1390 aa30.16■■■□□ 2.42
PBX1-210ENST00000496120 LRP6O75581 1613 aa30.15■■■□□ 2.42
PBX1-210ENST00000496120 EIF3AQ14152 1382 aaKnown RBP30.13■■■□□ 2.41
PBX1-210ENST00000496120 BRINP3Q76B58 766 aa30.12■■■□□ 2.41
PBX1-210ENST00000496120 SPATA31A6Q5VVP1 1343 aa30.12■■■□□ 2.41
PBX1-210ENST00000496120 MIER1Q8N108 512 aa30.12■■■□□ 2.41
PBX1-210ENST00000496120 TESK2Q96S53 571 aa30.12■■■□□ 2.41
PBX1-210ENST00000496120 SETD1AO15047 1707 aaKnown RBP30.11■■■□□ 2.41
PBX1-210ENST00000496120 ASXL1Q8IXJ9 1541 aa30.11■■■□□ 2.41
PBX1-210ENST00000496120 MST1RQ04912 1400 aa30.09■■■□□ 2.41
PBX1-210ENST00000496120 ARHGEF28Q8N1W1 1705 aaKnown RBP30.08■■■□□ 2.41
PBX1-210ENST00000496120 NHSL1Q5SYE7 1610 aa30.07■■■□□ 2.4
PBX1-210ENST00000496120 NALCNQ8IZF0 1738 aa30.07■■■□□ 2.4
PBX1-210ENST00000496120 ADGRL3Q9HAR2 1447 aa30.06■■■□□ 2.4
PBX1-210ENST00000496120 TMEM132EQ6IEE7 984 aa30.02■■■□□ 2.4
PBX1-210ENST00000496120 QRICH2Q9H0J4 1663 aa30.02■■■□□ 2.4
PBX1-210ENST00000496120 TMF1P82094 1093 aa29.98■■■□□ 2.39
PBX1-210ENST00000496120 MEX3CQ5U5Q3 659 aaKnown RBP29.98■■■□□ 2.39
PBX1-210ENST00000496120 SBNO2Q9Y2G9 1366 aa29.98■■■□□ 2.39
PBX1-210ENST00000496120 PTCH1Q13635 1447 aa29.97■■■□□ 2.39
PBX1-210ENST00000496120 ZNF772Q68DY9 489 aaPredicted RBP29.95■■■□□ 2.38
PBX1-210ENST00000496120 TRAK1Q9UPV9 953 aa29.95■■■□□ 2.38
PBX1-210ENST00000496120 POLR3GLQ9BT43 218 aa29.94■■■□□ 2.38
PBX1-210ENST00000496120 YTHDC2Q9H6S0 1430 aaKnown RBP29.94■■■□□ 2.38
PBX1-210ENST00000496120 CENPJQ9HC77 1338 aaPredicted RBP29.94■■■□□ 2.38
PBX1-210ENST00000496120 SLC24A1O60721 1099 aa29.92■■■□□ 2.38
PBX1-210ENST00000496120 ROBO2Q9HCK4 1378 aa29.92■■■□□ 2.38
PBX1-210ENST00000496120 C1orf167Q5SNV9 1468 aa29.9■■■□□ 2.38
PBX1-210ENST00000496120 KNDC1Q76NI1 1749 aa29.89■■■□□ 2.38
PBX1-210ENST00000496120 NUTM2BA6NNL0 878 aaPredicted RBP29.89■■■□□ 2.38
PBX1-210ENST00000496120 NUTM2EB1AL46 878 aaPredicted RBP29.89■■■□□ 2.38
PBX1-210ENST00000496120 NUTM2AQ8IVF1 878 aaPredicted RBP29.89■■■□□ 2.38
PBX1-210ENST00000496120 LRRC59Q96AG4 307 aaKnown RBP29.89■■■□□ 2.38
PBX1-210ENST00000496120 DLC1Q96QB1 1528 aa29.88■■■□□ 2.37
PBX1-210ENST00000496120 DDX17Q92841 729 aaKnown RBP29.88■■■□□ 2.37
PBX1-210ENST00000496120 MYOM1P52179 1685 aa29.87■■■□□ 2.37
PBX1-210ENST00000496120 ANP32CO43423 234 aa29.87■■■□□ 2.37
PBX1-210ENST00000496120 CDCA8Q53HL2 280 aa29.86■■■□□ 2.37
PBX1-210ENST00000496120 PNPLA6Q8IY17 1366 aa29.86■■■□□ 2.37
PBX1-210ENST00000496120 LRPPRCP42704 1394 aaKnown RBP29.86■■■□□ 2.37
PBX1-210ENST00000496120 STK26Q9P289 416 aa29.82■■■□□ 2.36
PBX1-210ENST00000496120 AFF2P51816 1311 aa29.82■■■□□ 2.36
PBX1-210ENST00000496120 ABCC11Q96J66 1382 aa29.8■■■□□ 2.36
PBX1-210ENST00000496120 CDK12Q9NYV4 1490 aaPredicted RBP29.79■■■□□ 2.36
PBX1-210ENST00000496120 RXRBP28702 533 aa29.79■■■□□ 2.36
PBX1-210ENST00000496120 TULP4Q9NRJ4 1543 aa29.78■■■□□ 2.36
PBX1-210ENST00000496120 ORAI2Q96SN7 254 aa29.78■■■□□ 2.36
PBX1-210ENST00000496120 TECPR2O15040 1411 aa29.77■■■□□ 2.36
PBX1-210ENST00000496120 SOS2Q07890 1332 aaPredicted RBP29.77■■■□□ 2.36
PBX1-210ENST00000496120 CDC42BPGQ6DT37 1551 aa29.76■■■□□ 2.35
PBX1-210ENST00000496120 UPF1Q92900 1129 aaKnown RBP eCLIP29.73■■■□□ 2.35
PBX1-210ENST00000496120 PRAM1Q96QH2 718 aa29.73■■■□□ 2.35
PBX1-210ENST00000496120 C8orf37Q96NL8 207 aa29.72■■■□□ 2.35
PBX1-210ENST00000496120 CCER2I3L3R5 266 aa29.71■■■□□ 2.35
PBX1-210ENST00000496120 PRKRIP1Q9H875 184 aaPredicted RBP29.7■■■□□ 2.34
PBX1-210ENST00000496120 POGKQ9P215 609 aa29.7■■■□□ 2.34
PBX1-210ENST00000496120 COL22A1Q8NFW1 1626 aaPredicted RBP29.69■■■□□ 2.34
PBX1-210ENST00000496120 SIRT1Q96EB6 747 aa29.69■■■□□ 2.34
PBX1-210ENST00000496120 PUS7Q96PZ0 661 aaKnown RBP29.69■■■□□ 2.34
PBX1-210ENST00000496120 EVC2Q86UK5 1308 aa29.69■■■□□ 2.34
PBX1-210ENST00000496120 PER1O15534 1290 aaPredicted RBP29.66■■■□□ 2.34
PBX1-210ENST00000496120 SAFB2Q14151 953 aaKnown RBP eCLIP29.66■■■□□ 2.34
PBX1-210ENST00000496120 PANK3Q9H999 370 aa29.66■■■□□ 2.34
PBX1-210ENST00000496120 ADAMTS2O95450 1211 aa29.65■■■□□ 2.34
PBX1-210ENST00000496120 QTRT2Q9H974 415 aaKnown RBP29.65■■■□□ 2.34
PBX1-210ENST00000496120 PLEKHH1Q9ULM0 1364 aa29.65■■■□□ 2.34
PBX1-210ENST00000496120 RGS12O14924 1447 aa29.65■■■□□ 2.34
PBX1-210ENST00000496120 PXDNQ92626 1479 aa29.63■■■□□ 2.33
PBX1-210ENST00000496120 RBM6P78332 1123 aaKnown RBP29.63■■■□□ 2.33
PBX1-210ENST00000496120 MINK1Q8N4C8 1332 aaPredicted RBP29.62■■■□□ 2.33
PBX1-210ENST00000496120 NGLY1Q96IV0 654 aa29.62■■■□□ 2.33
PBX1-210ENST00000496120 NPHP3Q7Z494 1330 aa29.61■■■□□ 2.33
PBX1-210ENST00000496120 ESCO1Q5FWF5 840 aa29.61■■■□□ 2.33
PBX1-210ENST00000496120 WAPLQ7Z5K2 1190 aa29.61■■■□□ 2.33
PBX1-210ENST00000496120 FMN2Q9NZ56 1722 aa29.59■■■□□ 2.33
PBX1-210ENST00000496120 KTN1Q86UP2 1357 aaKnown RBP29.58■■■□□ 2.33
PBX1-210ENST00000496120 ADGRB2O60241 1585 aa29.57■■■□□ 2.32
PBX1-210ENST00000496120 MARF1Q9Y4F3 1742 aaKnown RBP29.55■■■□□ 2.32
PBX1-210ENST00000496120 FNBP4Q8N3X1 1017 aaPredicted RBP29.55■■■□□ 2.32
PBX1-210ENST00000496120 FOXO3O43524 673 aa29.54■■■□□ 2.32
PBX1-210ENST00000496120 CABP2Q9NPB3 220 aa29.54■■■□□ 2.32
PBX1-210ENST00000496120 USP21Q9UK80 565 aa29.54■■■□□ 2.32
PBX1-210ENST00000496120 ATAD2Q6PL18 1390 aa29.53■■■□□ 2.32
PBX1-210ENST00000496120 NINLQ9Y2I6 1382 aa29.52■■■□□ 2.32
PBX1-210ENST00000496120 NUTM2FA1L443 756 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms