RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 GUCA2AQ02747 115 aa10.31□□□□□ -0.76
SSR3-208ENST00000496050 POTEBQ6S5H4 581 aa10.31□□□□□ -0.76
SSR3-208ENST00000496050 MTMR14Q8NCE2 650 aa10.31□□□□□ -0.76
SSR3-208ENST00000496050 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
SSR3-208ENST00000496050 C6orf229H3BNL8 230 aa10.3□□□□□ -0.76
SSR3-208ENST00000496050 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
SSR3-208ENST00000496050 USP17L8P0C7I0 530 aa10.29□□□□□ -0.76
SSR3-208ENST00000496050 HELBQ8NG08 1087 aaPredicted RBP10.29□□□□□ -0.76
SSR3-208ENST00000496050 HLA-CQ95604 372 aa10.29□□□□□ -0.76
SSR3-208ENST00000496050 PRR14Q9BWN1 585 aa10.29□□□□□ -0.76
SSR3-208ENST00000496050 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
SSR3-208ENST00000496050 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
SSR3-208ENST00000496050 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
SSR3-208ENST00000496050 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
SSR3-208ENST00000496050 HRO43593 1189 aa10.26□□□□□ -0.77
SSR3-208ENST00000496050 ACTN4O43707 911 aaKnown RBP10.26□□□□□ -0.77
SSR3-208ENST00000496050 PPP4CP60510 307 aa10.26□□□□□ -0.77
SSR3-208ENST00000496050 Q3C1V9 767 aa10.26□□□□□ -0.77
SSR3-208ENST00000496050 TSC1Q92574 1164 aa10.26□□□□□ -0.77
SSR3-208ENST00000496050 ABL2P42684 1182 aa10.25□□□□□ -0.77
SSR3-208ENST00000496050 MORN1Q5T089 497 aa10.24□□□□□ -0.77
SSR3-208ENST00000496050 CCDC82Q8N4S0 544 aa10.24□□□□□ -0.77
SSR3-208ENST00000496050 SERPINA10Q9UK55 444 aa10.24□□□□□ -0.77
SSR3-208ENST00000496050 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
SSR3-208ENST00000496050 PRR7Q8TB68 274 aa10.22□□□□□ -0.77
SSR3-208ENST00000496050 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
SSR3-208ENST00000496050 CCDC97Q96F63 343 aaPredicted RBP10.22□□□□□ -0.77
SSR3-208ENST00000496050 TBC1D2BQ9UPU7 963 aa10.22□□□□□ -0.77
SSR3-208ENST00000496050 SLC27A5Q9Y2P5 690 aa10.22□□□□□ -0.77
SSR3-208ENST00000496050 NDUFB9Q9Y6M9 179 aa10.22□□□□□ -0.77
SSR3-208ENST00000496050 CFAP99D6REC4 459 aa10.21□□□□□ -0.77
SSR3-208ENST00000496050 PUS10Q3MIT2 529 aaKnown RBP10.21□□□□□ -0.77
SSR3-208ENST00000496050 RETREG3Q86VR2 466 aa10.21□□□□□ -0.77
SSR3-208ENST00000496050 TSR3Q9UJK0 312 aaKnown RBP10.21□□□□□ -0.77
SSR3-208ENST00000496050 GJD4Q96KN9 370 aaPredicted RBP10.2□□□□□ -0.78
SSR3-208ENST00000496050 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
SSR3-208ENST00000496050 WNT2BQ93097 391 aa10.19□□□□□ -0.78
SSR3-208ENST00000496050 PLSCR2Q9NRY7 297 aa10.19□□□□□ -0.78
SSR3-208ENST00000496050 SALL2Q9Y467 1007 aaPredicted RBP10.19□□□□□ -0.78
SSR3-208ENST00000496050 WASHC4Q2M389 1173 aa10.18□□□□□ -0.78
SSR3-208ENST00000496050 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
SSR3-208ENST00000496050 DESI1Q6ICB0 168 aa10.18□□□□□ -0.78
SSR3-208ENST00000496050 LRRN4Q8WUT4 740 aa10.18□□□□□ -0.78
SSR3-208ENST00000496050 SCUBE3Q8IX30 993 aa10.17□□□□□ -0.78
SSR3-208ENST00000496050 TRIM34Q9BYJ4 488 aa10.17□□□□□ -0.78
SSR3-208ENST00000496050 HMX1Q9NP08 348 aaPredicted RBP10.17□□□□□ -0.78
SSR3-208ENST00000496050 NR1I2O75469 434 aa10.16□□□□□ -0.78
SSR3-208ENST00000496050 BCAMP50895 628 aa10.16□□□□□ -0.78
SSR3-208ENST00000496050 CALR3Q96L12 384 aaKnown RBP10.16□□□□□ -0.78
SSR3-208ENST00000496050 USB1Q9BQ65 265 aaKnown RBP10.16□□□□□ -0.78
SSR3-208ENST00000496050 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
SSR3-208ENST00000496050 APLP1P51693 650 aa10.15□□□□□ -0.78
SSR3-208ENST00000496050 FMNL1O95466 1100 aaPredicted RBP10.14□□□□□ -0.79
SSR3-208ENST00000496050 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
SSR3-208ENST00000496050 LYPD8Q6UX82 237 aa10.14□□□□□ -0.79
SSR3-208ENST00000496050 PNMA1Q8ND90 353 aa10.14□□□□□ -0.79
SSR3-208ENST00000496050 IRF5Q13568 498 aa10.12□□□□□ -0.79
SSR3-208ENST00000496050 BLOC1S3Q6QNY0 202 aa10.12□□□□□ -0.79
SSR3-208ENST00000496050 PER1O15534 1290 aaPredicted RBP10.11□□□□□ -0.79
SSR3-208ENST00000496050 NR6A1Q15406 480 aa10.11□□□□□ -0.79
SSR3-208ENST00000496050 RNF19BQ6ZMZ0 732 aa10.11□□□□□ -0.79
SSR3-208ENST00000496050 POM121CA8CG34 1229 aa10.1□□□□□ -0.79
SSR3-208ENST00000496050 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
SSR3-208ENST00000496050 EPS8L1Q8TE68 723 aa10.1□□□□□ -0.79
SSR3-208ENST00000496050 GLMNQ92990 594 aa10.1□□□□□ -0.79
SSR3-208ENST00000496050 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
SSR3-208ENST00000496050 THAP11Q96EK4 314 aa10.08□□□□□ -0.8
SSR3-208ENST00000496050 SOX11P35716 441 aa10.06□□□□□ -0.8
SSR3-208ENST00000496050 VAC14Q08AM6 782 aa10.06□□□□□ -0.8
SSR3-208ENST00000496050 THSD4Q6ZMP0 1018 aa10.06□□□□□ -0.8
SSR3-208ENST00000496050 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
SSR3-208ENST00000496050 PDIA4P13667 645 aaKnown RBP10.05□□□□□ -0.8
SSR3-208ENST00000496050 JUNDP17535 347 aa10.05□□□□□ -0.8
SSR3-208ENST00000496050 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
SSR3-208ENST00000496050 GPR37L1O60883 481 aa10.04□□□□□ -0.8
SSR3-208ENST00000496050 PTPRNQ16849 979 aa10.04□□□□□ -0.8
SSR3-208ENST00000496050 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
SSR3-208ENST00000496050 SPSB2Q99619 263 aa10.04□□□□□ -0.8
SSR3-208ENST00000496050 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
SSR3-208ENST00000496050 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
SSR3-208ENST00000496050 PPP1R15AO75807 674 aaPredicted RBP10.03□□□□□ -0.8
SSR3-208ENST00000496050 ALG2Q9H553 416 aa10.03□□□□□ -0.8
SSR3-208ENST00000496050 COPS2P61201 443 aa10.02□□□□□ -0.81
SSR3-208ENST00000496050 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
SSR3-208ENST00000496050 SEMA3FQ13275 785 aa10.02□□□□□ -0.81
SSR3-208ENST00000496050 MSS51Q4VC12 460 aa10.02□□□□□ -0.81
SSR3-208ENST00000496050 CTHP32929 405 aa10.01□□□□□ -0.81
SSR3-208ENST00000496050 EVA1BQ9NVM1 165 aa10.01□□□□□ -0.81
SSR3-208ENST00000496050 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
SSR3-208ENST00000496050 FAM160A2Q8N612 972 aaPredicted RBP10□□□□□ -0.81
SSR3-208ENST00000496050 ADAMTS19Q8TE59 1207 aa10□□□□□ -0.81
SSR3-208ENST00000496050 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
SSR3-208ENST00000496050 ZPR1O75312 459 aa9.99□□□□□ -0.81
SSR3-208ENST00000496050 DXOO77932 396 aaKnown RBP9.99□□□□□ -0.81
SSR3-208ENST00000496050 F12P00748 615 aaPredicted RBP9.99□□□□□ -0.81
SSR3-208ENST00000496050 NR1H3Q13133 447 aa9.99□□□□□ -0.81
SSR3-208ENST00000496050 ARMC2Q8NEN0 867 aa9.99□□□□□ -0.81
SSR3-208ENST00000496050 ZBBXA8MT70 800 aa9.98□□□□□ -0.81
SSR3-208ENST00000496050 CCNYL3P0C7X3 344 aa9.98□□□□□ -0.81
SSR3-208ENST00000496050 MMP16P51512 607 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms