RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 SPHKAPQ2M3C7 1700 aa15.94■□□□□ 0.14
C9orf78-207ENST00000495934 GLI3P10071 1580 aa15.94■□□□□ 0.14
C9orf78-207ENST00000495934 RALGAPBQ86X10 1494 aa15.93■□□□□ 0.14
C9orf78-207ENST00000495934 PSDA5PKW4 1024 aaPredicted RBP15.92■□□□□ 0.14
C9orf78-207ENST00000495934 HRCP23327 699 aa15.91■□□□□ 0.14
C9orf78-207ENST00000495934 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
C9orf78-207ENST00000495934 ZNF326Q5BKZ1 582 aaKnown RBP15.89■□□□□ 0.13
C9orf78-207ENST00000495934 UNC5CLQ8IV45 518 aa15.88■□□□□ 0.13
C9orf78-207ENST00000495934 NPHP3Q7Z494 1330 aa15.88■□□□□ 0.13
C9orf78-207ENST00000495934 PXDNQ92626 1479 aa15.87■□□□□ 0.13
C9orf78-207ENST00000495934 SLIT2O94813 1529 aa15.87■□□□□ 0.13
C9orf78-207ENST00000495934 SEPT12Q8IYM1 358 aa15.86■□□□□ 0.13
C9orf78-207ENST00000495934 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
C9orf78-207ENST00000495934 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
C9orf78-207ENST00000495934 BAG6P46379 1132 aa15.84■□□□□ 0.13
C9orf78-207ENST00000495934 XPCQ01831 940 aaPredicted RBP15.84■□□□□ 0.13
C9orf78-207ENST00000495934 APLP2Q06481 763 aa15.84■□□□□ 0.13
C9orf78-207ENST00000495934 NEXMIFQ5QGS0 1516 aa15.84■□□□□ 0.13
C9orf78-207ENST00000495934 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.12
C9orf78-207ENST00000495934 YY1P25490 414 aa15.82■□□□□ 0.12
C9orf78-207ENST00000495934 KRT27Q7Z3Y8 459 aa15.82■□□□□ 0.12
C9orf78-207ENST00000495934 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
C9orf78-207ENST00000495934 NUP155O75694 1391 aa15.81■□□□□ 0.12
C9orf78-207ENST00000495934 FOXO3O43524 673 aa15.8■□□□□ 0.12
C9orf78-207ENST00000495934 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
C9orf78-207ENST00000495934 HFM1A2PYH4 1435 aa15.79■□□□□ 0.12
C9orf78-207ENST00000495934 PRAG1Q86YV5 1406 aa15.79■□□□□ 0.12
C9orf78-207ENST00000495934 R3HDM1Q15032 1099 aaKnown RBP15.79■□□□□ 0.12
C9orf78-207ENST00000495934 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
C9orf78-207ENST00000495934 VPS72Q15906 364 aa15.78■□□□□ 0.12
C9orf78-207ENST00000495934 PLCH1Q4KWH8 1693 aa15.78■□□□□ 0.12
C9orf78-207ENST00000495934 ONECUT3O60422 494 aaPredicted RBP15.77■□□□□ 0.12
C9orf78-207ENST00000495934 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.12
C9orf78-207ENST00000495934 RGPD1P0DJD0 1748 aa15.77■□□□□ 0.11
C9orf78-207ENST00000495934 NWD2Q9ULI1 1742 aa15.77■□□□□ 0.11
C9orf78-207ENST00000495934 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
C9orf78-207ENST00000495934 EN1Q05925 392 aaPredicted RBP15.76■□□□□ 0.11
C9orf78-207ENST00000495934 KIF1BO60333 1816 aa15.75■□□□□ 0.11
C9orf78-207ENST00000495934 A0A0G2JS52 829 aa15.75■□□□□ 0.11
C9orf78-207ENST00000495934 MYT1Q01538 1121 aa15.75■□□□□ 0.11
C9orf78-207ENST00000495934 SPATA31A3Q5VYP0 1347 aa15.74■□□□□ 0.11
C9orf78-207ENST00000495934 ROCK1Q13464 1354 aa15.74■□□□□ 0.11
C9orf78-207ENST00000495934 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
C9orf78-207ENST00000495934 NUTM2FA1L443 756 aa15.72■□□□□ 0.11
C9orf78-207ENST00000495934 TNS1Q9HBL0 1735 aaKnown RBP15.71■□□□□ 0.11
C9orf78-207ENST00000495934 CCDC144AA2RUR9 1427 aa15.71■□□□□ 0.11
C9orf78-207ENST00000495934 NAIPQ13075 1403 aa15.71■□□□□ 0.11
C9orf78-207ENST00000495934 KIF1AQ12756 1690 aa15.7■□□□□ 0.1
C9orf78-207ENST00000495934 DISP2A7MBM2 1401 aa15.7■□□□□ 0.1
C9orf78-207ENST00000495934 VGFO15240 615 aaPredicted RBP15.7■□□□□ 0.1
C9orf78-207ENST00000495934 ABCA3Q99758 1704 aa15.7■□□□□ 0.1
C9orf78-207ENST00000495934 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
C9orf78-207ENST00000495934 PLEKHG5O94827 1062 aa15.68■□□□□ 0.1
C9orf78-207ENST00000495934 FAM98CQ17RN3 349 aaKnown RBP15.68■□□□□ 0.1
C9orf78-207ENST00000495934 FAM182BQ5T319 152 aa15.68■□□□□ 0.1
C9orf78-207ENST00000495934 CABLES1Q8TDN4 633 aa15.68■□□□□ 0.1
C9orf78-207ENST00000495934 EZH2Q15910 746 aaKnown RBP15.67■□□□□ 0.1
C9orf78-207ENST00000495934 KRT28Q7Z3Y7 464 aa15.67■□□□□ 0.1
C9orf78-207ENST00000495934 NRAPQ86VF7 1730 aa15.67■□□□□ 0.1
C9orf78-207ENST00000495934 FMN2Q9NZ56 1722 aa15.67■□□□□ 0.1
C9orf78-207ENST00000495934 ADGRB2O60241 1585 aa15.66■□□□□ 0.1
C9orf78-207ENST00000495934 PPLO60437 1756 aa15.65■□□□□ 0.1
C9orf78-207ENST00000495934 FAM83GA6ND36 823 aa15.64■□□□□ 0.09
C9orf78-207ENST00000495934 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
C9orf78-207ENST00000495934 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
C9orf78-207ENST00000495934 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
C9orf78-207ENST00000495934 LMOD2Q6P5Q4 547 aa15.62■□□□□ 0.09
C9orf78-207ENST00000495934 CAMKK2Q96RR4 588 aa15.62■□□□□ 0.09
C9orf78-207ENST00000495934 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
C9orf78-207ENST00000495934 TECPR2O15040 1411 aa15.61■□□□□ 0.09
C9orf78-207ENST00000495934 THSD7AQ9UPZ6 1657 aa15.61■□□□□ 0.09
C9orf78-207ENST00000495934 PSME1Q06323 249 aa15.61■□□□□ 0.09
C9orf78-207ENST00000495934 ARHGEF10O15013 1369 aa15.61■□□□□ 0.09
C9orf78-207ENST00000495934 RREB1Q92766 1687 aa15.6■□□□□ 0.09
C9orf78-207ENST00000495934 BTG4Q9NY30 223 aa15.6■□□□□ 0.09
C9orf78-207ENST00000495934 STK26Q9P289 416 aa15.6■□□□□ 0.09
C9orf78-207ENST00000495934 PPP1R1BQ9UD71 204 aaPredicted RBP15.6■□□□□ 0.09
C9orf78-207ENST00000495934 SBNO1A3KN83 1393 aa15.6■□□□□ 0.09
C9orf78-207ENST00000495934 PARD3Q8TEW0 1356 aa15.6■□□□□ 0.09
C9orf78-207ENST00000495934 PLEKHH1Q9ULM0 1364 aa15.6■□□□□ 0.09
C9orf78-207ENST00000495934 IFT172Q9UG01 1749 aa15.6■□□□□ 0.09
C9orf78-207ENST00000495934 TRIM37O94972 964 aa15.59■□□□□ 0.09
C9orf78-207ENST00000495934 PHF8Q9UPP1 1060 aa15.59■□□□□ 0.09
C9orf78-207ENST00000495934 NUP188Q5SRE5 1749 aa15.59■□□□□ 0.09
C9orf78-207ENST00000495934 KNDC1Q76NI1 1749 aa15.59■□□□□ 0.09
C9orf78-207ENST00000495934 NINLQ9Y2I6 1382 aa15.59■□□□□ 0.09
C9orf78-207ENST00000495934 COL14A1Q05707 1796 aaKnown RBP15.59■□□□□ 0.09
C9orf78-207ENST00000495934 CAMTA1Q9Y6Y1 1673 aa15.58■□□□□ 0.08
C9orf78-207ENST00000495934 ITGAEP38570 1179 aa15.58■□□□□ 0.08
C9orf78-207ENST00000495934 IFFO2Q5TF58 517 aa15.58■□□□□ 0.08
C9orf78-207ENST00000495934 SPATA31A5Q5VU36 1347 aa15.57■□□□□ 0.08
C9orf78-207ENST00000495934 SPATA31A7Q8IWB4 1347 aa15.57■□□□□ 0.08
C9orf78-207ENST00000495934 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
C9orf78-207ENST00000495934 APBA3O96018 575 aa15.56■□□□□ 0.08
C9orf78-207ENST00000495934 SPON1Q9HCB6 807 aa15.56■□□□□ 0.08
C9orf78-207ENST00000495934 NRXN1Q9ULB1 1477 aa15.56■□□□□ 0.08
C9orf78-207ENST00000495934 ABCC11Q96J66 1382 aa15.55■□□□□ 0.08
C9orf78-207ENST00000495934 FAM196AQ6ZSG2 479 aa15.55■□□□□ 0.08
C9orf78-207ENST00000495934 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
C9orf78-207ENST00000495934 NBPF8Q3BBV2 869 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms