RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PREX1Q8TCU6 1659 aa20.16■□□□□ 0.82
CALD1-222ENST00000495522 SLFN5Q08AF3 891 aa20.16■□□□□ 0.82
CALD1-222ENST00000495522 MORC1Q86VD1 984 aa20.15■□□□□ 0.82
CALD1-222ENST00000495522 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
CALD1-222ENST00000495522 APAF1O14727 1248 aa20.15■□□□□ 0.82
CALD1-222ENST00000495522 TULP4Q9NRJ4 1543 aa20.14■□□□□ 0.82
CALD1-222ENST00000495522 TRMT2AQ8IZ69 625 aaKnown RBP20.14■□□□□ 0.81
CALD1-222ENST00000495522 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
CALD1-222ENST00000495522 TCERG1O14776 1098 aaKnown RBP20.12■□□□□ 0.81
CALD1-222ENST00000495522 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
CALD1-222ENST00000495522 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
CALD1-222ENST00000495522 MYO5BQ9ULV0 1848 aa20.12■□□□□ 0.81
CALD1-222ENST00000495522 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
CALD1-222ENST00000495522 SHPRHQ149N8 1683 aa20.1■□□□□ 0.81
CALD1-222ENST00000495522 ANKRD36BQ8N2N9 1353 aa20.1■□□□□ 0.81
CALD1-222ENST00000495522 NKTRP30414 1462 aaKnown RBP20.1■□□□□ 0.81
CALD1-222ENST00000495522 E9PSI1 815 aa20.1■□□□□ 0.81
CALD1-222ENST00000495522 C20orf194Q5TEA3 1177 aa20.09■□□□□ 0.81
CALD1-222ENST00000495522 NSD2O96028 1365 aa20.09■□□□□ 0.81
CALD1-222ENST00000495522 TNNT2P45379 298 aaPredicted RBP20.07■□□□□ 0.8
CALD1-222ENST00000495522 MS4A1P11836 297 aa20.06■□□□□ 0.8
CALD1-222ENST00000495522 SPINK5Q9NQ38 1064 aaPredicted RBP20.06■□□□□ 0.8
CALD1-222ENST00000495522 REREQ9P2R6 1566 aa20.06■□□□□ 0.8
CALD1-222ENST00000495522 NINLQ9Y2I6 1382 aa20.06■□□□□ 0.8
CALD1-222ENST00000495522 ANP32AP39687 249 aaKnown RBP20.05■□□□□ 0.8
CALD1-222ENST00000495522 CABP2Q9NPB3 220 aa20.05■□□□□ 0.8
CALD1-222ENST00000495522 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
CALD1-222ENST00000495522 PTPRMP28827 1452 aa20.03■□□□□ 0.8
CALD1-222ENST00000495522 AGLP35573 1532 aa20.03■□□□□ 0.8
CALD1-222ENST00000495522 STK26Q9P289 416 aa20.03■□□□□ 0.8
CALD1-222ENST00000495522 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
CALD1-222ENST00000495522 RUNDC1Q96C34 613 aa20.02■□□□□ 0.8
CALD1-222ENST00000495522 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
CALD1-222ENST00000495522 MTHFSP49914 203 aa20.02■□□□□ 0.8
CALD1-222ENST00000495522 FBXO31Q5XUX0 539 aaPredicted RBP20.02■□□□□ 0.8
CALD1-222ENST00000495522 WWC1Q8IX03 1113 aa20.01■□□□□ 0.79
CALD1-222ENST00000495522 YTHDC2Q9H6S0 1430 aaKnown RBP20.01■□□□□ 0.79
CALD1-222ENST00000495522 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
CALD1-222ENST00000495522 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
CALD1-222ENST00000495522 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
CALD1-222ENST00000495522 SRPK2P78362 688 aaKnown RBP20■□□□□ 0.79
CALD1-222ENST00000495522 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
CALD1-222ENST00000495522 ABCC11Q96J66 1382 aa19.99■□□□□ 0.79
CALD1-222ENST00000495522 KDM2BQ8NHM5 1336 aa19.99■□□□□ 0.79
CALD1-222ENST00000495522 CLTCQ00610 1675 aaKnown RBP19.99■□□□□ 0.79
CALD1-222ENST00000495522 ALKQ9UM73 1620 aa19.99■□□□□ 0.79
CALD1-222ENST00000495522 A0A1W2PP64 1363 aa19.99■□□□□ 0.79
CALD1-222ENST00000495522 PDE4AP27815 886 aa19.98■□□□□ 0.79
CALD1-222ENST00000495522 CENPQQ7L2Z9 268 aaPredicted RBP19.98■□□□□ 0.79
CALD1-222ENST00000495522 IPO9Q96P70 1041 aaKnown RBP19.98■□□□□ 0.79
CALD1-222ENST00000495522 PRAM1Q96QH2 718 aa19.97■□□□□ 0.79
CALD1-222ENST00000495522 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
CALD1-222ENST00000495522 POGKQ9P215 609 aa19.97■□□□□ 0.79
CALD1-222ENST00000495522 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
CALD1-222ENST00000495522 TCP11L2Q8N4U5 519 aa19.97■□□□□ 0.79
CALD1-222ENST00000495522 BACH2Q9BYV9 841 aa19.97■□□□□ 0.79
CALD1-222ENST00000495522 BCAR3O75815 825 aa19.95■□□□□ 0.78
CALD1-222ENST00000495522 MINK1Q8N4C8 1332 aaPredicted RBP19.95■□□□□ 0.78
CALD1-222ENST00000495522 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
CALD1-222ENST00000495522 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
CALD1-222ENST00000495522 SPATA31D1Q6ZQQ2 1576 aa19.94■□□□□ 0.78
CALD1-222ENST00000495522 NCBP3Q53F19 620 aaKnown RBP19.94■□□□□ 0.78
CALD1-222ENST00000495522 WDR63Q8IWG1 891 aa19.94■□□□□ 0.78
CALD1-222ENST00000495522 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
CALD1-222ENST00000495522 CCDC27Q2M243 656 aa19.93■□□□□ 0.78
CALD1-222ENST00000495522 RRP7AQ9Y3A4 280 aaKnown RBP19.93■□□□□ 0.78
CALD1-222ENST00000495522 A2ML1A8K2U0 1454 aa19.92■□□□□ 0.78
CALD1-222ENST00000495522 MED14O60244 1454 aa19.92■□□□□ 0.78
CALD1-222ENST00000495522 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
CALD1-222ENST00000495522 CD163L1Q9NR16 1453 aa19.91■□□□□ 0.78
CALD1-222ENST00000495522 ARHGEF40Q8TER5 1519 aa19.9■□□□□ 0.78
CALD1-222ENST00000495522 U2AF1L5P0DN76 240 aaPredicted RBP19.9■□□□□ 0.78
CALD1-222ENST00000495522 U2AF1Q01081 240 aaKnown RBP eCLIP19.9■□□□□ 0.78
CALD1-222ENST00000495522 PDE3AQ14432 1141 aa19.9■□□□□ 0.78
CALD1-222ENST00000495522 DLC1Q96QB1 1528 aa19.9■□□□□ 0.78
CALD1-222ENST00000495522 ADGRB2O60241 1585 aa19.89■□□□□ 0.78
CALD1-222ENST00000495522 PAK3O75914 559 aaPredicted RBP19.89■□□□□ 0.77
CALD1-222ENST00000495522 GGNBP2Q9H3C7 697 aa19.89■□□□□ 0.77
CALD1-222ENST00000495522 HDGFL2Q7Z4V5 671 aaPredicted RBP19.88■□□□□ 0.77
CALD1-222ENST00000495522 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
CALD1-222ENST00000495522 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
CALD1-222ENST00000495522 SKAP1Q86WV1 359 aa19.88■□□□□ 0.77
CALD1-222ENST00000495522 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
CALD1-222ENST00000495522 NLRP1Q9C000 1473 aa19.87■□□□□ 0.77
CALD1-222ENST00000495522 FYB1O15117 783 aa19.87■□□□□ 0.77
CALD1-222ENST00000495522 CANXP27824 592 aaKnown RBP19.87■□□□□ 0.77
CALD1-222ENST00000495522 COL3A1P02461 1466 aaPredicted RBP19.86■□□□□ 0.77
CALD1-222ENST00000495522 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
CALD1-222ENST00000495522 SETD1AO15047 1707 aaKnown RBP19.86■□□□□ 0.77
CALD1-222ENST00000495522 RARSP54136 660 aaKnown RBP19.84■□□□□ 0.77
CALD1-222ENST00000495522 MYH16Q9H6N6 1097 aa19.84■□□□□ 0.77
CALD1-222ENST00000495522 MLECQ14165 292 aa19.84■□□□□ 0.77
CALD1-222ENST00000495522 KIF20BQ96Q89 1820 aa19.83■□□□□ 0.77
CALD1-222ENST00000495522 CABP1Q9NZU7 370 aa19.83■□□□□ 0.76
CALD1-222ENST00000495522 U2SURPO15042 1029 aaKnown RBP19.81■□□□□ 0.76
CALD1-222ENST00000495522 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
CALD1-222ENST00000495522 ATP7BP35670 1465 aa19.81■□□□□ 0.76
CALD1-222ENST00000495522 PANK1Q8TE04 598 aa19.8■□□□□ 0.76
CALD1-222ENST00000495522 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.8■□□□□ 0.76
CALD1-222ENST00000495522 FRAT1Q92837 279 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms