RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 CARD11Q9BXL7 1154 aa15.72■□□□□ 0.11
KDM1A-205ENST00000494920 MSH6P52701 1360 aa15.72■□□□□ 0.11
KDM1A-205ENST00000494920 SBNO2Q9Y2G9 1366 aa15.72■□□□□ 0.11
KDM1A-205ENST00000494920 C19orf44Q9H6X5 657 aa15.71■□□□□ 0.11
KDM1A-205ENST00000494920 MST1RQ04912 1400 aa15.7■□□□□ 0.1
KDM1A-205ENST00000494920 TULP4Q9NRJ4 1543 aa15.7■□□□□ 0.1
KDM1A-205ENST00000494920 CENPJQ9HC77 1338 aaPredicted RBP15.69■□□□□ 0.1
KDM1A-205ENST00000494920 USP32Q8NFA0 1604 aa15.69■□□□□ 0.1
KDM1A-205ENST00000494920 EIF3AQ14152 1382 aaKnown RBP15.69■□□□□ 0.1
KDM1A-205ENST00000494920 USP47Q96K76 1375 aa15.69■□□□□ 0.1
KDM1A-205ENST00000494920 POGKQ9P215 609 aa15.67■□□□□ 0.1
KDM1A-205ENST00000494920 SAFB2Q14151 953 aaKnown RBP eCLIP15.66■□□□□ 0.1
KDM1A-205ENST00000494920 TESK2Q96S53 571 aa15.66■□□□□ 0.1
KDM1A-205ENST00000494920 RGPD8O14715 1765 aaPredicted RBP15.66■□□□□ 0.1
KDM1A-205ENST00000494920 TOPAZ1Q8N9V7 1692 aa15.66■□□□□ 0.1
KDM1A-205ENST00000494920 ATP7BP35670 1465 aa15.65■□□□□ 0.1
KDM1A-205ENST00000494920 C1orf167Q5SNV9 1468 aa15.65■□□□□ 0.1
KDM1A-205ENST00000494920 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
KDM1A-205ENST00000494920 MINK1Q8N4C8 1332 aaPredicted RBP15.64■□□□□ 0.09
KDM1A-205ENST00000494920 ROBO1Q9Y6N7 1651 aa15.63■□□□□ 0.09
KDM1A-205ENST00000494920 ANKARQ7Z5J8 1434 aa15.63■□□□□ 0.09
KDM1A-205ENST00000494920 C14orf37Q86TY3 774 aa15.63■□□□□ 0.09
KDM1A-205ENST00000494920 ST20-MTHFSA0A0A6YYL1 179 aa15.62■□□□□ 0.09
KDM1A-205ENST00000494920 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
KDM1A-205ENST00000494920 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
KDM1A-205ENST00000494920 PRR36Q9H6K5 1346 aa15.62■□□□□ 0.09
KDM1A-205ENST00000494920 NHSL1Q5SYE7 1610 aa15.61■□□□□ 0.09
KDM1A-205ENST00000494920 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
KDM1A-205ENST00000494920 ATF3P18847 181 aa15.61■□□□□ 0.09
KDM1A-205ENST00000494920 ITSN1Q15811 1721 aa15.6■□□□□ 0.09
KDM1A-205ENST00000494920 TOM1O60784 492 aa15.6■□□□□ 0.09
KDM1A-205ENST00000494920 SLAIN2Q9P270 581 aa15.6■□□□□ 0.09
KDM1A-205ENST00000494920 AHDC1Q5TGY3 1603 aaPredicted RBP15.59■□□□□ 0.09
KDM1A-205ENST00000494920 KIF1AQ12756 1690 aa15.59■□□□□ 0.09
KDM1A-205ENST00000494920 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
KDM1A-205ENST00000494920 BRINP3Q76B58 766 aa15.57■□□□□ 0.08
KDM1A-205ENST00000494920 FBXO41Q8TF61 875 aa15.57■□□□□ 0.08
KDM1A-205ENST00000494920 CDK19Q9BWU1 502 aa15.57■□□□□ 0.08
KDM1A-205ENST00000494920 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
KDM1A-205ENST00000494920 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
KDM1A-205ENST00000494920 EIF4G2P78344 907 aaKnown RBP eCLIP15.56■□□□□ 0.08
KDM1A-205ENST00000494920 COL16A1Q07092 1604 aaPredicted RBP15.55■□□□□ 0.08
KDM1A-205ENST00000494920 EVC2Q86UK5 1308 aa15.55■□□□□ 0.08
KDM1A-205ENST00000494920 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
KDM1A-205ENST00000494920 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
KDM1A-205ENST00000494920 MYOM1P52179 1685 aa15.54■□□□□ 0.08
KDM1A-205ENST00000494920 NUDT16Q96DE0 195 aaKnown RBP15.53■□□□□ 0.08
KDM1A-205ENST00000494920 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
KDM1A-205ENST00000494920 PXDNQ92626 1479 aa15.52■□□□□ 0.08
KDM1A-205ENST00000494920 NUTM2FA1L443 756 aa15.52■□□□□ 0.08
KDM1A-205ENST00000494920 AKAP12Q02952 1782 aa15.52■□□□□ 0.07
KDM1A-205ENST00000494920 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
KDM1A-205ENST00000494920 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
KDM1A-205ENST00000494920 POLR3AO14802 1390 aaPredicted RBP15.51■□□□□ 0.07
KDM1A-205ENST00000494920 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
KDM1A-205ENST00000494920 PIP4K2BP78356 416 aa15.51■□□□□ 0.07
KDM1A-205ENST00000494920 PLEKHG3A1L390 1219 aa15.5■□□□□ 0.07
KDM1A-205ENST00000494920 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
KDM1A-205ENST00000494920 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
KDM1A-205ENST00000494920 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
KDM1A-205ENST00000494920 PPIP5K1Q6PFW1 1433 aa15.5■□□□□ 0.07
KDM1A-205ENST00000494920 SRPK2P78362 688 aaKnown RBP15.49■□□□□ 0.07
KDM1A-205ENST00000494920 PHF8Q9UPP1 1060 aa15.49■□□□□ 0.07
KDM1A-205ENST00000494920 MON2Q7Z3U7 1717 aa15.48■□□□□ 0.07
KDM1A-205ENST00000494920 SOS2Q07890 1332 aaPredicted RBP15.48■□□□□ 0.07
KDM1A-205ENST00000494920 C11orf95C9JLR9 678 aaPredicted RBP15.48■□□□□ 0.07
KDM1A-205ENST00000494920 TMF1P82094 1093 aa15.48■□□□□ 0.07
KDM1A-205ENST00000494920 ESCO1Q5FWF5 840 aa15.48■□□□□ 0.07
KDM1A-205ENST00000494920 NRKQ7Z2Y5 1582 aa15.48■□□□□ 0.07
KDM1A-205ENST00000494920 CPSF1Q10570 1443 aaKnown RBP15.47■□□□□ 0.07
KDM1A-205ENST00000494920 DDX17Q92841 729 aaKnown RBP15.47■□□□□ 0.07
KDM1A-205ENST00000494920 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
KDM1A-205ENST00000494920 ALS2Q96Q42 1657 aa15.46■□□□□ 0.07
KDM1A-205ENST00000494920 NINLQ9Y2I6 1382 aa15.46■□□□□ 0.07
KDM1A-205ENST00000494920 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
KDM1A-205ENST00000494920 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
KDM1A-205ENST00000494920 HSPA1LP34931 641 aa15.45■□□□□ 0.06
KDM1A-205ENST00000494920 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
KDM1A-205ENST00000494920 FOXO3O43524 673 aa15.44■□□□□ 0.06
KDM1A-205ENST00000494920 PMFBP1Q8TBY8 1022 aa15.44■□□□□ 0.06
KDM1A-205ENST00000494920 ACEP12821 1306 aa15.43■□□□□ 0.06
KDM1A-205ENST00000494920 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
KDM1A-205ENST00000494920 ILDR1Q86SU0 546 aaPredicted RBP15.43■□□□□ 0.06
KDM1A-205ENST00000494920 CABP1Q9NZU7 370 aa15.43■□□□□ 0.06
KDM1A-205ENST00000494920 USP6P35125 1406 aa15.43■□□□□ 0.06
KDM1A-205ENST00000494920 KIF7Q2M1P5 1343 aa15.43■□□□□ 0.06
KDM1A-205ENST00000494920 SBNO1A3KN83 1393 aa15.42■□□□□ 0.06
KDM1A-205ENST00000494920 CDCA8Q53HL2 280 aa15.42■□□□□ 0.06
KDM1A-205ENST00000494920 CRYBG1Q9Y4K1 1723 aa15.42■□□□□ 0.06
KDM1A-205ENST00000494920 A0A1W2PP64 1363 aa15.41■□□□□ 0.06
KDM1A-205ENST00000494920 MARF1Q9Y4F3 1742 aaKnown RBP15.41■□□□□ 0.06
KDM1A-205ENST00000494920 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
KDM1A-205ENST00000494920 TNS3Q68CZ2 1445 aa15.41■□□□□ 0.06
KDM1A-205ENST00000494920 USP54Q70EL1 1684 aa15.41■□□□□ 0.06
KDM1A-205ENST00000494920 ANKRD36BQ8N2N9 1353 aa15.4■□□□□ 0.06
KDM1A-205ENST00000494920 CCDC7Q96M83 1385 aa15.4■□□□□ 0.06
KDM1A-205ENST00000494920 PIK3C2AO00443 1686 aa15.4■□□□□ 0.06
KDM1A-205ENST00000494920 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
KDM1A-205ENST00000494920 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
KDM1A-205ENST00000494920 ABCA3Q99758 1704 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms