RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
HDLBP-245ENST00000494862 POGKQ9P215 609 aa15.64■□□□□ 0.09
HDLBP-245ENST00000494862 KNSTRNQ9Y448 316 aa15.64■□□□□ 0.09
HDLBP-245ENST00000494862 SLIT1O75093 1534 aa15.63■□□□□ 0.09
HDLBP-245ENST00000494862 CNGB1Q14028 1251 aaPredicted RBP15.63■□□□□ 0.09
HDLBP-245ENST00000494862 TXNDC2Q86VQ3 553 aa15.63■□□□□ 0.09
HDLBP-245ENST00000494862 PRAM1Q96QH2 718 aa15.63■□□□□ 0.09
HDLBP-245ENST00000494862 EID1Q9Y6B2 187 aa15.63■□□□□ 0.09
HDLBP-245ENST00000494862 MYOM1P52179 1685 aa15.63■□□□□ 0.09
HDLBP-245ENST00000494862 RIMS1Q86UR5 1692 aaKnown RBP15.63■□□□□ 0.09
HDLBP-245ENST00000494862 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
HDLBP-245ENST00000494862 LTKP29376 864 aa15.62■□□□□ 0.09
HDLBP-245ENST00000494862 SIRT1Q96EB6 747 aa15.62■□□□□ 0.09
HDLBP-245ENST00000494862 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
HDLBP-245ENST00000494862 BRD4O60885 1362 aaPredicted RBP15.62■□□□□ 0.09
HDLBP-245ENST00000494862 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
HDLBP-245ENST00000494862 METP08581 1390 aa15.61■□□□□ 0.09
HDLBP-245ENST00000494862 BCANQ96GW7 911 aa15.6■□□□□ 0.09
HDLBP-245ENST00000494862 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
HDLBP-245ENST00000494862 SAFB2Q14151 953 aaKnown RBP eCLIP15.59■□□□□ 0.09
HDLBP-245ENST00000494862 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
HDLBP-245ENST00000494862 NLRP13Q86W25 1043 aa15.59■□□□□ 0.09
HDLBP-245ENST00000494862 TECPR2O15040 1411 aa15.59■□□□□ 0.09
HDLBP-245ENST00000494862 TMC1Q8TDI8 760 aa15.58■□□□□ 0.08
HDLBP-245ENST00000494862 MED14O60244 1454 aa15.58■□□□□ 0.08
HDLBP-245ENST00000494862 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
HDLBP-245ENST00000494862 NINLQ9Y2I6 1382 aa15.57■□□□□ 0.08
HDLBP-245ENST00000494862 FAM135BQ49AJ0 1406 aa15.57■□□□□ 0.08
HDLBP-245ENST00000494862 CEP170BQ9Y4F5 1589 aaPredicted RBP15.57■□□□□ 0.08
HDLBP-245ENST00000494862 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
HDLBP-245ENST00000494862 CARD14Q9BXL6 1004 aa15.56■□□□□ 0.08
HDLBP-245ENST00000494862 SLC12A5Q9H2X9 1139 aa15.56■□□□□ 0.08
HDLBP-245ENST00000494862 CABP2Q9NPB3 220 aa15.56■□□□□ 0.08
HDLBP-245ENST00000494862 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
HDLBP-245ENST00000494862 ATAD2Q6PL18 1390 aa15.56■□□□□ 0.08
HDLBP-245ENST00000494862 KNDC1Q76NI1 1749 aa15.55■□□□□ 0.08
HDLBP-245ENST00000494862 WAPLQ7Z5K2 1190 aa15.55■□□□□ 0.08
HDLBP-245ENST00000494862 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
HDLBP-245ENST00000494862 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
HDLBP-245ENST00000494862 PLEKHH1Q9ULM0 1364 aa15.54■□□□□ 0.08
HDLBP-245ENST00000494862 SRPK2P78362 688 aaKnown RBP15.54■□□□□ 0.08
HDLBP-245ENST00000494862 HNRNPUQ00839 825 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDLBP-245ENST00000494862 CPS1P31327 1500 aa15.53■□□□□ 0.08
HDLBP-245ENST00000494862 ANKRD36BQ8N2N9 1353 aa15.53■□□□□ 0.08
HDLBP-245ENST00000494862 CDK19Q9BWU1 502 aa15.53■□□□□ 0.08
HDLBP-245ENST00000494862 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
HDLBP-245ENST00000494862 DIP2AQ14689 1571 aa15.52■□□□□ 0.07
HDLBP-245ENST00000494862 NSD3Q9BZ95 1437 aa15.51■□□□□ 0.07
HDLBP-245ENST00000494862 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
HDLBP-245ENST00000494862 PPP2R1AP30153 589 aa15.5■□□□□ 0.07
HDLBP-245ENST00000494862 SLC26A8Q96RN1 970 aa15.5■□□□□ 0.07
HDLBP-245ENST00000494862 WASLO00401 505 aaPredicted RBP15.49■□□□□ 0.07
HDLBP-245ENST00000494862 ANKLE2Q86XL3 938 aa15.49■□□□□ 0.07
HDLBP-245ENST00000494862 PTPRUQ92729 1446 aa15.49■□□□□ 0.07
HDLBP-245ENST00000494862 SETD1BQ9UPS6 1966 aaKnown RBP15.49■□□□□ 0.07
HDLBP-245ENST00000494862 ROBO2Q9HCK4 1378 aa15.49■□□□□ 0.07
HDLBP-245ENST00000494862 USP32Q8NFA0 1604 aa15.48■□□□□ 0.07
HDLBP-245ENST00000494862 FBXO41Q8TF61 875 aa15.48■□□□□ 0.07
HDLBP-245ENST00000494862 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
HDLBP-245ENST00000494862 PIK3R4Q99570 1358 aa15.48■□□□□ 0.07
HDLBP-245ENST00000494862 NSD2O96028 1365 aa15.47■□□□□ 0.07
HDLBP-245ENST00000494862 INSRP06213 1382 aa15.47■□□□□ 0.07
HDLBP-245ENST00000494862 CGNL1Q0VF96 1302 aa15.46■□□□□ 0.07
HDLBP-245ENST00000494862 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
HDLBP-245ENST00000494862 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
HDLBP-245ENST00000494862 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
HDLBP-245ENST00000494862 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
HDLBP-245ENST00000494862 HDGFL2Q7Z4V5 671 aaPredicted RBP15.45■□□□□ 0.06
HDLBP-245ENST00000494862 GTF3C3Q9Y5Q9 886 aa15.45■□□□□ 0.06
HDLBP-245ENST00000494862 A0A1W2PP64 1363 aa15.45■□□□□ 0.06
HDLBP-245ENST00000494862 MORC1Q86VD1 984 aa15.44■□□□□ 0.06
HDLBP-245ENST00000494862 CABP1Q9NZU7 370 aa15.44■□□□□ 0.06
HDLBP-245ENST00000494862 CD163L1Q9NR16 1453 aa15.44■□□□□ 0.06
HDLBP-245ENST00000494862 ATP7BP35670 1465 aa15.43■□□□□ 0.06
HDLBP-245ENST00000494862 ADGRB2O60241 1585 aa15.43■□□□□ 0.06
HDLBP-245ENST00000494862 NUDT16Q96DE0 195 aaKnown RBP15.42■□□□□ 0.06
HDLBP-245ENST00000494862 CCDC61Q9Y6R9 512 aa15.4■□□□□ 0.06
HDLBP-245ENST00000494862 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
HDLBP-245ENST00000494862 PPIP5K1Q6PFW1 1433 aa15.39■□□□□ 0.05
HDLBP-245ENST00000494862 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.39■□□□□ 0.05
HDLBP-245ENST00000494862 NPHP4O75161 1426 aaPredicted RBP15.38■□□□□ 0.05
HDLBP-245ENST00000494862 CPSF1Q10570 1443 aaKnown RBP15.38■□□□□ 0.05
HDLBP-245ENST00000494862 POLR3AO14802 1390 aaPredicted RBP15.37■□□□□ 0.05
HDLBP-245ENST00000494862 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
HDLBP-245ENST00000494862 WDR43Q15061 677 aaKnown RBP eCLIP15.37■□□□□ 0.05
HDLBP-245ENST00000494862 PRR36Q9H6K5 1346 aa15.37■□□□□ 0.05
HDLBP-245ENST00000494862 FYB1O15117 783 aa15.36■□□□□ 0.05
HDLBP-245ENST00000494862 KCNA6P17658 529 aa15.36■□□□□ 0.05
HDLBP-245ENST00000494862 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-245ENST00000494862 CDC42BPGQ6DT37 1551 aa15.35■□□□□ 0.05
HDLBP-245ENST00000494862 EDC4Q6P2E9 1401 aaKnown RBP15.34■□□□□ 0.05
HDLBP-245ENST00000494862 PLEKHG3A1L390 1219 aa15.34■□□□□ 0.05
HDLBP-245ENST00000494862 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
HDLBP-245ENST00000494862 GGNBP2Q9H3C7 697 aa15.33■□□□□ 0.04
HDLBP-245ENST00000494862 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.04
HDLBP-245ENST00000494862 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
HDLBP-245ENST00000494862 CFAP53Q96M91 514 aa15.32■□□□□ 0.04
HDLBP-245ENST00000494862 MTHFSP49914 203 aa15.31■□□□□ 0.04
HDLBP-245ENST00000494862 CHD2O14647 1828 aaKnown RBP15.31■□□□□ 0.04
HDLBP-245ENST00000494862 ANKARQ7Z5J8 1434 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms