RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 PANK3Q9H999 370 aa15.01□□□□□ -0.01
ZIC4-216ENST00000494569 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
ZIC4-216ENST00000494569 MED14O60244 1454 aa15□□□□□ -0.01
ZIC4-216ENST00000494569 FBXO31Q5XUX0 539 aaPredicted RBP15□□□□□ -0.01
ZIC4-216ENST00000494569 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
ZIC4-216ENST00000494569 CDCA8Q53HL2 280 aa14.99□□□□□ -0.01
ZIC4-216ENST00000494569 POLR3GLQ9BT43 218 aa14.99□□□□□ -0.01
ZIC4-216ENST00000494569 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
ZIC4-216ENST00000494569 TOM1O60784 492 aa14.98□□□□□ -0.01
ZIC4-216ENST00000494569 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
ZIC4-216ENST00000494569 DLC1Q96QB1 1528 aa14.98□□□□□ -0.01
ZIC4-216ENST00000494569 PUS7Q96PZ0 661 aaKnown RBP14.97□□□□□ -0.01
ZIC4-216ENST00000494569 TNRQ92752 1358 aa14.97□□□□□ -0.01
ZIC4-216ENST00000494569 HNRNPUQ00839 825 aaKnown RBP eCLIP14.97□□□□□ -0.01
ZIC4-216ENST00000494569 ARXQ96QS3 562 aa14.96□□□□□ -0.01
ZIC4-216ENST00000494569 CENPJQ9HC77 1338 aaPredicted RBP14.96□□□□□ -0.01
ZIC4-216ENST00000494569 CHGAP10645 457 aaKnown RBP14.95□□□□□ -0.02
ZIC4-216ENST00000494569 HSPA1LP34931 641 aa14.95□□□□□ -0.02
ZIC4-216ENST00000494569 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
ZIC4-216ENST00000494569 KIF20BQ96Q89 1820 aa14.94□□□□□ -0.02
ZIC4-216ENST00000494569 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
ZIC4-216ENST00000494569 FAM9BQ8IZU0 186 aa14.93□□□□□ -0.02
ZIC4-216ENST00000494569 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
ZIC4-216ENST00000494569 TOPAZ1Q8N9V7 1692 aa14.92□□□□□ -0.02
ZIC4-216ENST00000494569 YTHDC2Q9H6S0 1430 aaKnown RBP14.92□□□□□ -0.02
ZIC4-216ENST00000494569 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
ZIC4-216ENST00000494569 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
ZIC4-216ENST00000494569 BCANQ96GW7 911 aa14.92□□□□□ -0.02
ZIC4-216ENST00000494569 NPHP4O75161 1426 aaPredicted RBP14.91□□□□□ -0.02
ZIC4-216ENST00000494569 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
ZIC4-216ENST00000494569 AKAP12Q02952 1782 aa14.91□□□□□ -0.02
ZIC4-216ENST00000494569 ANKLE2Q86XL3 938 aa14.91□□□□□ -0.02
ZIC4-216ENST00000494569 CARD14Q9BXL6 1004 aa14.91□□□□□ -0.02
ZIC4-216ENST00000494569 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
ZIC4-216ENST00000494569 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
ZIC4-216ENST00000494569 MON2Q7Z3U7 1717 aa14.89□□□□□ -0.03
ZIC4-216ENST00000494569 FKBP8Q14318 412 aa14.89□□□□□ -0.03
ZIC4-216ENST00000494569 NRKQ7Z2Y5 1582 aa14.88□□□□□ -0.03
ZIC4-216ENST00000494569 TMC1Q8TDI8 760 aa14.88□□□□□ -0.03
ZIC4-216ENST00000494569 ADGRB2O60241 1585 aa14.88□□□□□ -0.03
ZIC4-216ENST00000494569 STRCP1A6NGW2 1772 aa14.88□□□□□ -0.03
ZIC4-216ENST00000494569 TECPR2O15040 1411 aa14.87□□□□□ -0.03
ZIC4-216ENST00000494569 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
ZIC4-216ENST00000494569 NUTM2DQ5VT03 806 aaPredicted RBP14.86□□□□□ -0.03
ZIC4-216ENST00000494569 PPP2R1AP30153 589 aa14.86□□□□□ -0.03
ZIC4-216ENST00000494569 CC2D1BQ5T0F9 858 aaKnown RBP14.86□□□□□ -0.03
ZIC4-216ENST00000494569 PIP4K2BP78356 416 aa14.86□□□□□ -0.03
ZIC4-216ENST00000494569 SLIT1O75093 1534 aa14.85□□□□□ -0.03
ZIC4-216ENST00000494569 KNSTRNQ9Y448 316 aa14.85□□□□□ -0.03
ZIC4-216ENST00000494569 ARHGAP23Q9P227 1491 aa14.85□□□□□ -0.03
ZIC4-216ENST00000494569 NINLQ9Y2I6 1382 aa14.85□□□□□ -0.03
ZIC4-216ENST00000494569 ZNF521Q96K83 1311 aa14.84□□□□□ -0.03
ZIC4-216ENST00000494569 CDC42BPGQ6DT37 1551 aa14.84□□□□□ -0.03
ZIC4-216ENST00000494569 ERICH6BQ5W0A0 696 aa14.84□□□□□ -0.03
ZIC4-216ENST00000494569 COL3A1P02461 1466 aaPredicted RBP14.84□□□□□ -0.03
ZIC4-216ENST00000494569 ABCC11Q96J66 1382 aa14.83□□□□□ -0.03
ZIC4-216ENST00000494569 ANKRD36BQ8N2N9 1353 aa14.83□□□□□ -0.04
ZIC4-216ENST00000494569 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
ZIC4-216ENST00000494569 TMEM2Q9UHN6 1383 aa14.82□□□□□ -0.04
ZIC4-216ENST00000494569 EVC2Q86UK5 1308 aa14.81□□□□□ -0.04
ZIC4-216ENST00000494569 NSD3Q9BZ95 1437 aa14.81□□□□□ -0.04
ZIC4-216ENST00000494569 NALCNQ8IZF0 1738 aa14.81□□□□□ -0.04
ZIC4-216ENST00000494569 USP54Q70EL1 1684 aa14.81□□□□□ -0.04
ZIC4-216ENST00000494569 ADAMTS13Q76LX8 1427 aa14.8□□□□□ -0.04
ZIC4-216ENST00000494569 FAM135BQ49AJ0 1406 aa14.8□□□□□ -0.04
ZIC4-216ENST00000494569 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.79□□□□□ -0.04
ZIC4-216ENST00000494569 CNGB1Q14028 1251 aaPredicted RBP14.79□□□□□ -0.04
ZIC4-216ENST00000494569 SIRT1Q96EB6 747 aa14.79□□□□□ -0.04
ZIC4-216ENST00000494569 MARF1Q9Y4F3 1742 aaKnown RBP14.79□□□□□ -0.04
ZIC4-216ENST00000494569 NSD2O96028 1365 aa14.79□□□□□ -0.04
ZIC4-216ENST00000494569 METP08581 1390 aa14.78□□□□□ -0.04
ZIC4-216ENST00000494569 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.78□□□□□ -0.04
ZIC4-216ENST00000494569 XIRP1Q702N8 1843 aaKnown RBP14.78□□□□□ -0.04
ZIC4-216ENST00000494569 POLR3AO14802 1390 aaPredicted RBP14.78□□□□□ -0.04
ZIC4-216ENST00000494569 NUDCQ9Y266 331 aa14.78□□□□□ -0.04
ZIC4-216ENST00000494569 SLC12A5Q9H2X9 1139 aa14.77□□□□□ -0.04
ZIC4-216ENST00000494569 PLEKHG1Q9ULL1 1385 aa14.77□□□□□ -0.04
ZIC4-216ENST00000494569 DIP2AQ14689 1571 aa14.76□□□□□ -0.05
ZIC4-216ENST00000494569 ATAD2Q6PL18 1390 aa14.76□□□□□ -0.05
ZIC4-216ENST00000494569 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
ZIC4-216ENST00000494569 PLEKHH1Q9ULM0 1364 aa14.76□□□□□ -0.05
ZIC4-216ENST00000494569 PRAM1Q96QH2 718 aa14.76□□□□□ -0.05
ZIC4-216ENST00000494569 A0A1W2PP64 1363 aa14.75□□□□□ -0.05
ZIC4-216ENST00000494569 ATP7BP35670 1465 aa14.75□□□□□ -0.05
ZIC4-216ENST00000494569 ITSN1Q15811 1721 aa14.75□□□□□ -0.05
ZIC4-216ENST00000494569 TRMT2AQ8IZ69 625 aaKnown RBP14.74□□□□□ -0.05
ZIC4-216ENST00000494569 PDE3BQ13370 1112 aa14.73□□□□□ -0.05
ZIC4-216ENST00000494569 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
ZIC4-216ENST00000494569 ADAMTS8Q9UP79 889 aa14.73□□□□□ -0.05
ZIC4-216ENST00000494569 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
ZIC4-216ENST00000494569 CPSF1Q10570 1443 aaKnown RBP14.72□□□□□ -0.05
ZIC4-216ENST00000494569 STK26Q9P289 416 aa14.71□□□□□ -0.05
ZIC4-216ENST00000494569 RGS17Q9UGC6 210 aaPredicted RBP14.71□□□□□ -0.06
ZIC4-216ENST00000494569 PTPRUQ92729 1446 aa14.71□□□□□ -0.06
ZIC4-216ENST00000494569 RGPD1P0DJD0 1748 aa14.7□□□□□ -0.06
ZIC4-216ENST00000494569 CGNL1Q0VF96 1302 aa14.69□□□□□ -0.06
ZIC4-216ENST00000494569 LTKP29376 864 aa14.69□□□□□ -0.06
ZIC4-216ENST00000494569 NEFLP07196 543 aa14.68□□□□□ -0.06
ZIC4-216ENST00000494569 HDGFP51858 240 aaKnown RBP14.68□□□□□ -0.06
ZIC4-216ENST00000494569 CDK19Q9BWU1 502 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms