RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 HLA-CQ95604 372 aa7.5□□□□□ -1.21
CLHC1-213ENST00000494539 USB1Q9BQ65 265 aaKnown RBP7.5□□□□□ -1.21
CLHC1-213ENST00000494539 TBC1D2Q9BYX2 928 aa7.5□□□□□ -1.21
CLHC1-213ENST00000494539 GUCA2AQ02747 115 aa7.49□□□□□ -1.21
CLHC1-213ENST00000494539 FAM160A2Q8N612 972 aaPredicted RBP7.49□□□□□ -1.21
CLHC1-213ENST00000494539 MOXD2PA6NHM9 499 aa7.48□□□□□ -1.21
CLHC1-213ENST00000494539 TPRNQ4KMQ1 711 aa7.48□□□□□ -1.21
CLHC1-213ENST00000494539 ZNF775Q96BV0 537 aaPredicted RBP7.48□□□□□ -1.21
CLHC1-213ENST00000494539 RETREG3Q86VR2 466 aa7.47□□□□□ -1.21
CLHC1-213ENST00000494539 RSPH6AQ9H0K4 717 aa7.47□□□□□ -1.21
CLHC1-213ENST00000494539 KDM4CQ9H3R0 1056 aa7.47□□□□□ -1.21
CLHC1-213ENST00000494539 SPDYE5A6NIY4 337 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 C6orf229H3BNL8 230 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 PPEF1O14829 653 aaPredicted RBP7.46□□□□□ -1.22
CLHC1-213ENST00000494539 NDUFV2P19404 249 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 MMP16P51512 607 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 PKDCCQ504Y2 493 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 RSBN1LQ6PCB5 846 aaPredicted RBP7.46□□□□□ -1.22
CLHC1-213ENST00000494539 DDRGK1Q96HY6 314 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 PRDM9Q9NQV7 894 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 PCDHGC3Q9UN70 934 aa7.46□□□□□ -1.22
CLHC1-213ENST00000494539 FCF1Q9Y324 198 aaKnown RBP7.46□□□□□ -1.22
CLHC1-213ENST00000494539 SPTLC1O15269 473 aa7.45□□□□□ -1.22
CLHC1-213ENST00000494539 DXOO77932 396 aaKnown RBP7.45□□□□□ -1.22
CLHC1-213ENST00000494539 SLC19A1P41440 591 aa7.45□□□□□ -1.22
CLHC1-213ENST00000494539 GPBP1L1Q9HC44 474 aaPredicted RBP7.45□□□□□ -1.22
CLHC1-213ENST00000494539 JUNDP17535 347 aa7.44□□□□□ -1.22
CLHC1-213ENST00000494539 MTMR2Q13614 643 aa7.44□□□□□ -1.22
CLHC1-213ENST00000494539 MYSM1Q5VVJ2 828 aa7.44□□□□□ -1.22
CLHC1-213ENST00000494539 RIC3Q7Z5B4 369 aa7.44□□□□□ -1.22
CLHC1-213ENST00000494539 PRPF38BQ5VTL8 546 aaKnown RBP7.43□□□□□ -1.22
CLHC1-213ENST00000494539 SYMPKQ92797 1274 aaKnown RBP7.43□□□□□ -1.22
CLHC1-213ENST00000494539 ZBTB3Q9H5J0 574 aa7.43□□□□□ -1.22
CLHC1-213ENST00000494539 PRKCSHP14314 528 aaPredicted RBP7.42□□□□□ -1.22
CLHC1-213ENST00000494539 RPIAP49247 311 aa7.42□□□□□ -1.22
CLHC1-213ENST00000494539 NEUROD2Q15784 382 aa7.42□□□□□ -1.22
CLHC1-213ENST00000494539 TUSC1Q2TAM9 212 aa7.42□□□□□ -1.22
CLHC1-213ENST00000494539 ZBTB24O43167 697 aaPredicted RBP7.41□□□□□ -1.22
CLHC1-213ENST00000494539 CLK2P49760 499 aaKnown RBP7.41□□□□□ -1.22
CLHC1-213ENST00000494539 SPRYD7Q5W111 196 aa7.41□□□□□ -1.22
CLHC1-213ENST00000494539 LIAT1Q6ZQX7 453 aa7.41□□□□□ -1.22
CLHC1-213ENST00000494539 ZNF598Q86UK7 904 aaKnown RBP7.41□□□□□ -1.22
CLHC1-213ENST00000494539 DGAT1O75907 488 aa7.4□□□□□ -1.22
CLHC1-213ENST00000494539 PLA2G2CQ5R387 149 aa7.4□□□□□ -1.22
CLHC1-213ENST00000494539 DESI1Q6ICB0 168 aa7.4□□□□□ -1.22
CLHC1-213ENST00000494539 PRR7Q8TB68 274 aa7.4□□□□□ -1.22
CLHC1-213ENST00000494539 EMID1Q96A84 441 aaPredicted RBP7.4□□□□□ -1.22
CLHC1-213ENST00000494539 CD2BP2O95400 341 aaKnown RBP7.39□□□□□ -1.23
CLHC1-213ENST00000494539 HRCP23327 699 aa7.39□□□□□ -1.23
CLHC1-213ENST00000494539 SH3D19Q5HYK7 790 aa7.39□□□□□ -1.23
CLHC1-213ENST00000494539 ZNF697Q5TEC3 545 aa7.39□□□□□ -1.23
CLHC1-213ENST00000494539 FAM117AQ9C073 453 aa7.39□□□□□ -1.23
CLHC1-213ENST00000494539 LIMD1Q9UGP4 676 aa7.39□□□□□ -1.23
CLHC1-213ENST00000494539 PCDHB15Q9Y5E8 787 aa7.39□□□□□ -1.23
CLHC1-213ENST00000494539 MYT1Q01538 1121 aa7.38□□□□□ -1.23
CLHC1-213ENST00000494539 PTPRNQ16849 979 aa7.38□□□□□ -1.23
CLHC1-213ENST00000494539 CSPP1Q1MSJ5 1256 aa7.38□□□□□ -1.23
CLHC1-213ENST00000494539 TRIM67Q6ZTA4 783 aa7.38□□□□□ -1.23
CLHC1-213ENST00000494539 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
CLHC1-213ENST00000494539 NUDT12Q9BQG2 462 aa7.38□□□□□ -1.23
CLHC1-213ENST00000494539 FAM187AA6NFU0 413 aa7.37□□□□□ -1.23
CLHC1-213ENST00000494539 NUTM2BA6NNL0 878 aaPredicted RBP7.37□□□□□ -1.23
CLHC1-213ENST00000494539 NUTM2EB1AL46 878 aaPredicted RBP7.37□□□□□ -1.23
CLHC1-213ENST00000494539 CCNYL3P0C7X3 344 aa7.37□□□□□ -1.23
CLHC1-213ENST00000494539 SKIV2LQ15477 1246 aaKnown RBP7.37□□□□□ -1.23
CLHC1-213ENST00000494539 NUTM2DQ5VT03 806 aaPredicted RBP7.37□□□□□ -1.23
CLHC1-213ENST00000494539 NUTM2AQ8IVF1 878 aaPredicted RBP7.37□□□□□ -1.23
CLHC1-213ENST00000494539 POLR3EQ9NVU0 708 aa7.37□□□□□ -1.23
CLHC1-213ENST00000494539 LILRB3O75022 631 aa7.36□□□□□ -1.23
CLHC1-213ENST00000494539 BRPF1P55201 1214 aaPredicted RBP7.36□□□□□ -1.23
CLHC1-213ENST00000494539 PRR20EP86478 221 aa7.36□□□□□ -1.23
CLHC1-213ENST00000494539 PRR20CP86479 221 aa7.36□□□□□ -1.23
CLHC1-213ENST00000494539 PRR20DP86480 221 aa7.36□□□□□ -1.23
CLHC1-213ENST00000494539 PRR20BP86481 221 aa7.36□□□□□ -1.23
CLHC1-213ENST00000494539 PRR20AP86496 221 aa7.36□□□□□ -1.23
CLHC1-213ENST00000494539 CABLES1Q8TDN4 633 aa7.36□□□□□ -1.23
CLHC1-213ENST00000494539 PLEKHG3A1L390 1219 aa7.35□□□□□ -1.23
CLHC1-213ENST00000494539 TRIM32Q13049 653 aa7.35□□□□□ -1.23
CLHC1-213ENST00000494539 HELBQ8NG08 1087 aaPredicted RBP7.35□□□□□ -1.23
CLHC1-213ENST00000494539 CFAP99D6REC4 459 aa7.34□□□□□ -1.23
CLHC1-213ENST00000494539 QPCTQ16769 361 aa7.34□□□□□ -1.23
CLHC1-213ENST00000494539 GOPCQ9HD26 462 aa7.34□□□□□ -1.23
CLHC1-213ENST00000494539 ATP1B4Q9UN42 357 aaPredicted RBP7.34□□□□□ -1.23
CLHC1-213ENST00000494539 POTECB2RU33 542 aa7.33□□□□□ -1.24
CLHC1-213ENST00000494539 TNFRSF10AO00220 468 aa7.33□□□□□ -1.24
CLHC1-213ENST00000494539 LYPD8Q6UX82 237 aa7.33□□□□□ -1.24
CLHC1-213ENST00000494539 TSC1Q92574 1164 aa7.33□□□□□ -1.24
CLHC1-213ENST00000494539 WNT7BP56706 349 aa7.32□□□□□ -1.24
CLHC1-213ENST00000494539 EVA1BQ9NVM1 165 aa7.32□□□□□ -1.24
CLHC1-213ENST00000494539 GDF9O60383 454 aa7.31□□□□□ -1.24
CLHC1-213ENST00000494539 KCNH2Q12809 1159 aa7.31□□□□□ -1.24
CLHC1-213ENST00000494539 FOXC1Q12948 553 aa7.31□□□□□ -1.24
CLHC1-213ENST00000494539 PCMTD1Q96MG8 357 aaPredicted RBP7.31□□□□□ -1.24
CLHC1-213ENST00000494539 WNT7AO00755 349 aa7.3□□□□□ -1.24
CLHC1-213ENST00000494539 CTHP32929 405 aa7.3□□□□□ -1.24
CLHC1-213ENST00000494539 RTL5Q5HYW3 569 aaPredicted RBP7.3□□□□□ -1.24
CLHC1-213ENST00000494539 PPP2R2DQ66LE6 453 aa7.3□□□□□ -1.24
CLHC1-213ENST00000494539 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.3□□□□□ -1.24
CLHC1-213ENST00000494539 PKD2L1Q9P0L9 805 aa7.3□□□□□ -1.24
CLHC1-213ENST00000494539 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms