RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 POGKQ9P215 609 aa22.27■■□□□ 1.16
ATG4B-225ENST00000494465 MINK1Q8N4C8 1332 aaPredicted RBP22.26■■□□□ 1.15
ATG4B-225ENST00000494465 INSRP06213 1382 aa22.26■■□□□ 1.15
ATG4B-225ENST00000494465 KNDC1Q76NI1 1749 aa22.26■■□□□ 1.15
ATG4B-225ENST00000494465 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
ATG4B-225ENST00000494465 PLEKHH1Q9ULM0 1364 aa22.24■■□□□ 1.15
ATG4B-225ENST00000494465 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
ATG4B-225ENST00000494465 NINLQ9Y2I6 1382 aa22.23■■□□□ 1.15
ATG4B-225ENST00000494465 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
ATG4B-225ENST00000494465 LTKP29376 864 aa22.22■■□□□ 1.15
ATG4B-225ENST00000494465 SLIT1O75093 1534 aa22.22■■□□□ 1.15
ATG4B-225ENST00000494465 TECPR2O15040 1411 aa22.22■■□□□ 1.15
ATG4B-225ENST00000494465 WAPLQ7Z5K2 1190 aa22.21■■□□□ 1.15
ATG4B-225ENST00000494465 ARHGAP23Q9P227 1491 aa22.21■■□□□ 1.15
ATG4B-225ENST00000494465 ATAD2Q6PL18 1390 aa22.21■■□□□ 1.15
ATG4B-225ENST00000494465 SRPK2P78362 688 aaKnown RBP22.21■■□□□ 1.15
ATG4B-225ENST00000494465 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.15
ATG4B-225ENST00000494465 PLEKHG1Q9ULL1 1385 aa22.2■■□□□ 1.14
ATG4B-225ENST00000494465 CPS1P31327 1500 aa22.19■■□□□ 1.14
ATG4B-225ENST00000494465 FKBP8Q14318 412 aa22.19■■□□□ 1.14
ATG4B-225ENST00000494465 SMG6Q86US8 1419 aaKnown RBP22.19■■□□□ 1.14
ATG4B-225ENST00000494465 CD163L1Q9NR16 1453 aa22.19■■□□□ 1.14
ATG4B-225ENST00000494465 RIMS1Q86UR5 1692 aaKnown RBP22.18■■□□□ 1.14
ATG4B-225ENST00000494465 A0A1W2PP64 1363 aa22.18■■□□□ 1.14
ATG4B-225ENST00000494465 MED14O60244 1454 aa22.18■■□□□ 1.14
ATG4B-225ENST00000494465 CDK19Q9BWU1 502 aa22.18■■□□□ 1.14
ATG4B-225ENST00000494465 FAM135BQ49AJ0 1406 aa22.17■■□□□ 1.14
ATG4B-225ENST00000494465 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
ATG4B-225ENST00000494465 SIRT1Q96EB6 747 aa22.16■■□□□ 1.14
ATG4B-225ENST00000494465 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
ATG4B-225ENST00000494465 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
ATG4B-225ENST00000494465 TXNDC2Q86VQ3 553 aa22.15■■□□□ 1.14
ATG4B-225ENST00000494465 ADAMTSL3P82987 1691 aa22.14■■□□□ 1.14
ATG4B-225ENST00000494465 NEFLP07196 543 aa22.13■■□□□ 1.13
ATG4B-225ENST00000494465 BCANQ96GW7 911 aa22.13■■□□□ 1.13
ATG4B-225ENST00000494465 NSD2O96028 1365 aa22.13■■□□□ 1.13
ATG4B-225ENST00000494465 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
ATG4B-225ENST00000494465 MORC1Q86VD1 984 aa22.12■■□□□ 1.13
ATG4B-225ENST00000494465 CEP170BQ9Y4F5 1589 aaPredicted RBP22.11■■□□□ 1.13
ATG4B-225ENST00000494465 EID1Q9Y6B2 187 aa22.11■■□□□ 1.13
ATG4B-225ENST00000494465 THEMISQ8N1K5 641 aaPredicted RBP22.1■■□□□ 1.13
ATG4B-225ENST00000494465 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
ATG4B-225ENST00000494465 ROBO2Q9HCK4 1378 aa22.1■■□□□ 1.13
ATG4B-225ENST00000494465 WDR43Q15061 677 aaKnown RBP eCLIP22.09■■□□□ 1.13
ATG4B-225ENST00000494465 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
ATG4B-225ENST00000494465 PTPRUQ92729 1446 aa22.09■■□□□ 1.13
ATG4B-225ENST00000494465 TERF2IPQ9NYB0 399 aa22.09■■□□□ 1.13
ATG4B-225ENST00000494465 WASLO00401 505 aaPredicted RBP22.08■■□□□ 1.13
ATG4B-225ENST00000494465 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
ATG4B-225ENST00000494465 SHPRHQ149N8 1683 aa22.08■■□□□ 1.13
ATG4B-225ENST00000494465 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.07■■□□□ 1.12
ATG4B-225ENST00000494465 ATP7BP35670 1465 aa22.07■■□□□ 1.12
ATG4B-225ENST00000494465 SLC26A8Q96RN1 970 aa22.06■■□□□ 1.12
ATG4B-225ENST00000494465 SALL2Q9Y467 1007 aaPredicted RBP22.06■■□□□ 1.12
ATG4B-225ENST00000494465 ADGRB2O60241 1585 aa22.05■■□□□ 1.12
ATG4B-225ENST00000494465 TNNT2P45379 298 aaPredicted RBP22.05■■□□□ 1.12
ATG4B-225ENST00000494465 DIP2AQ14689 1571 aa22.05■■□□□ 1.12
ATG4B-225ENST00000494465 ZNF142P52746 1687 aaPredicted RBP22.05■■□□□ 1.12
ATG4B-225ENST00000494465 KIF20BQ96Q89 1820 aa22.04■■□□□ 1.12
ATG4B-225ENST00000494465 TBX22Q9Y458 520 aa22.04■■□□□ 1.12
ATG4B-225ENST00000494465 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
ATG4B-225ENST00000494465 PDE3BQ13370 1112 aa22.03■■□□□ 1.12
ATG4B-225ENST00000494465 FYB1O15117 783 aa22.02■■□□□ 1.12
ATG4B-225ENST00000494465 CPSF1Q10570 1443 aaKnown RBP22.01■■□□□ 1.11
ATG4B-225ENST00000494465 PPIP5K1Q6PFW1 1433 aa22■■□□□ 1.11
ATG4B-225ENST00000494465 MTHFSP49914 203 aa22■■□□□ 1.11
ATG4B-225ENST00000494465 IRX6P78412 446 aaPredicted RBP22■■□□□ 1.11
ATG4B-225ENST00000494465 GGNBP2Q9H3C7 697 aa22■■□□□ 1.11
ATG4B-225ENST00000494465 RNF123Q5XPI4 1314 aa22■■□□□ 1.11
ATG4B-225ENST00000494465 SETD1BQ9UPS6 1966 aaKnown RBP21.99■■□□□ 1.11
ATG4B-225ENST00000494465 NUDT16Q96DE0 195 aaKnown RBP21.99■■□□□ 1.11
ATG4B-225ENST00000494465 XRN1Q8IZH2 1706 aaKnown RBP21.99■■□□□ 1.11
ATG4B-225ENST00000494465 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
ATG4B-225ENST00000494465 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
ATG4B-225ENST00000494465 PTCH1Q13635 1447 aa21.98■■□□□ 1.11
ATG4B-225ENST00000494465 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
ATG4B-225ENST00000494465 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
ATG4B-225ENST00000494465 AKAP12Q02952 1782 aa21.97■■□□□ 1.11
ATG4B-225ENST00000494465 PRR36Q9H6K5 1346 aa21.97■■□□□ 1.11
ATG4B-225ENST00000494465 TOPAZ1Q8N9V7 1692 aa21.96■■□□□ 1.11
ATG4B-225ENST00000494465 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
ATG4B-225ENST00000494465 NCKAP5LQ9HCH0 1330 aa21.96■■□□□ 1.11
ATG4B-225ENST00000494465 CCDC146Q8IYE0 955 aa21.96■■□□□ 1.11
ATG4B-225ENST00000494465 CCDC61Q9Y6R9 512 aa21.96■■□□□ 1.11
ATG4B-225ENST00000494465 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
ATG4B-225ENST00000494465 EDC4Q6P2E9 1401 aaKnown RBP21.94■■□□□ 1.1
ATG4B-225ENST00000494465 ERICH6BQ5W0A0 696 aa21.92■■□□□ 1.1
ATG4B-225ENST00000494465 COL3A1P02461 1466 aaPredicted RBP21.92■■□□□ 1.1
ATG4B-225ENST00000494465 CFAP53Q96M91 514 aa21.91■■□□□ 1.1
ATG4B-225ENST00000494465 APAF1O14727 1248 aa21.91■■□□□ 1.1
ATG4B-225ENST00000494465 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.9■■□□□ 1.11e-8■□□□□ 9.2
ATG4B-225ENST00000494465 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
ATG4B-225ENST00000494465 CHD2O14647 1828 aaKnown RBP21.88■■□□□ 1.09
ATG4B-225ENST00000494465 ANKLE2Q86XL3 938 aa21.87■■□□□ 1.09
ATG4B-225ENST00000494465 NRKQ7Z2Y5 1582 aa21.87■■□□□ 1.09
ATG4B-225ENST00000494465 NKTRP30414 1462 aaKnown RBP21.87■■□□□ 1.09
ATG4B-225ENST00000494465 IQSEC2Q5JU85 1478 aa21.87■■□□□ 1.09
ATG4B-225ENST00000494465 RCAN3Q9UKA8 241 aa21.86■■□□□ 1.09
ATG4B-225ENST00000494465 MAP2P11137 1827 aaKnown RBP21.85■■□□□ 1.09
ATG4B-225ENST00000494465 PNPLA6Q8IY17 1366 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms