RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 PUS7Q96PZ0 661 aaKnown RBP14.39□□□□□ -0.11
CLCN6-208ENST00000494028 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
CLCN6-208ENST00000494028 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
CLCN6-208ENST00000494028 EVC2Q86UK5 1308 aa14.39□□□□□ -0.11
CLCN6-208ENST00000494028 MON2Q7Z3U7 1717 aa14.38□□□□□ -0.11
CLCN6-208ENST00000494028 TMEM2Q9UHN6 1383 aa14.38□□□□□ -0.11
CLCN6-208ENST00000494028 PPP2R1AP30153 589 aa14.38□□□□□ -0.11
CLCN6-208ENST00000494028 CARD14Q9BXL6 1004 aa14.38□□□□□ -0.11
CLCN6-208ENST00000494028 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
CLCN6-208ENST00000494028 DIP2AQ14689 1571 aa14.38□□□□□ -0.11
CLCN6-208ENST00000494028 ITSN1Q15811 1721 aa14.38□□□□□ -0.11
CLCN6-208ENST00000494028 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
CLCN6-208ENST00000494028 KDM4FA0A1W2PPD8 638 aa14.37□□□□□ -0.11
CLCN6-208ENST00000494028 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
CLCN6-208ENST00000494028 CEP170BQ9Y4F5 1589 aaPredicted RBP14.36□□□□□ -0.11
CLCN6-208ENST00000494028 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
CLCN6-208ENST00000494028 NEFLP07196 543 aa14.36□□□□□ -0.11
CLCN6-208ENST00000494028 ATAD2Q6PL18 1390 aa14.35□□□□□ -0.11
CLCN6-208ENST00000494028 FKBP8Q14318 412 aa14.35□□□□□ -0.11
CLCN6-208ENST00000494028 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
CLCN6-208ENST00000494028 NSD2O96028 1365 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 ATP7BP35670 1465 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 STK26Q9P289 416 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 METP08581 1390 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
CLCN6-208ENST00000494028 MED14O60244 1454 aa14.33□□□□□ -0.12
CLCN6-208ENST00000494028 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.33□□□□□ -0.12
CLCN6-208ENST00000494028 PRAM1Q96QH2 718 aa14.33□□□□□ -0.12
CLCN6-208ENST00000494028 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
CLCN6-208ENST00000494028 NUDCQ9Y266 331 aa14.33□□□□□ -0.12
CLCN6-208ENST00000494028 CDC42BPGQ6DT37 1551 aa14.33□□□□□ -0.12
CLCN6-208ENST00000494028 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
CLCN6-208ENST00000494028 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
CLCN6-208ENST00000494028 SAFB2Q14151 953 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLCN6-208ENST00000494028 SLC12A5Q9H2X9 1139 aa14.31□□□□□ -0.12
CLCN6-208ENST00000494028 MINK1Q8N4C8 1332 aaPredicted RBP14.31□□□□□ -0.12
CLCN6-208ENST00000494028 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
CLCN6-208ENST00000494028 POLR3AO14802 1390 aaPredicted RBP14.3□□□□□ -0.12
CLCN6-208ENST00000494028 IQSEC2Q5JU85 1478 aa14.3□□□□□ -0.12
CLCN6-208ENST00000494028 COL3A1P02461 1466 aaPredicted RBP14.29□□□□□ -0.12
CLCN6-208ENST00000494028 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
CLCN6-208ENST00000494028 SENP3-EIF4A1A0A087X0R7 540 aa14.27□□□□□ -0.13
CLCN6-208ENST00000494028 BCANQ96GW7 911 aa14.27□□□□□ -0.13
CLCN6-208ENST00000494028 POGKQ9P215 609 aa14.27□□□□□ -0.13
CLCN6-208ENST00000494028 PTCH1Q13635 1447 aa14.26□□□□□ -0.13
CLCN6-208ENST00000494028 CEBPAP49715 358 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-208ENST00000494028 PTPRUQ92729 1446 aa14.25□□□□□ -0.13
CLCN6-208ENST00000494028 RNF123Q5XPI4 1314 aa14.25□□□□□ -0.13
CLCN6-208ENST00000494028 SRPK2P78362 688 aaKnown RBP14.25□□□□□ -0.13
CLCN6-208ENST00000494028 WDR43Q15061 677 aaKnown RBP eCLIP14.25□□□□□ -0.13
CLCN6-208ENST00000494028 ROBO2Q9HCK4 1378 aa14.24□□□□□ -0.13
CLCN6-208ENST00000494028 NALCNQ8IZF0 1738 aa14.24□□□□□ -0.13
CLCN6-208ENST00000494028 IRX6P78412 446 aaPredicted RBP14.22□□□□□ -0.13
CLCN6-208ENST00000494028 WAPLQ7Z5K2 1190 aa14.22□□□□□ -0.13
CLCN6-208ENST00000494028 MORC1Q86VD1 984 aa14.22□□□□□ -0.13
CLCN6-208ENST00000494028 ADAMTS8Q9UP79 889 aa14.22□□□□□ -0.13
CLCN6-208ENST00000494028 NKTRP30414 1462 aaKnown RBP14.22□□□□□ -0.13
CLCN6-208ENST00000494028 CPSF1Q10570 1443 aaKnown RBP14.22□□□□□ -0.13
CLCN6-208ENST00000494028 PPIP5K1Q6PFW1 1433 aa14.22□□□□□ -0.13
CLCN6-208ENST00000494028 FMN2Q9NZ56 1722 aa14.21□□□□□ -0.13
CLCN6-208ENST00000494028 LTKP29376 864 aa14.21□□□□□ -0.13
CLCN6-208ENST00000494028 HDGFP51858 240 aaKnown RBP14.21□□□□□ -0.13
CLCN6-208ENST00000494028 PDE3BQ13370 1112 aa14.21□□□□□ -0.13
CLCN6-208ENST00000494028 CDK19Q9BWU1 502 aa14.21□□□□□ -0.13
CLCN6-208ENST00000494028 ZNF521Q96K83 1311 aa14.2□□□□□ -0.14
CLCN6-208ENST00000494028 SIRT1Q96EB6 747 aa14.2□□□□□ -0.14
CLCN6-208ENST00000494028 EDC4Q6P2E9 1401 aaKnown RBP14.2□□□□□ -0.14
CLCN6-208ENST00000494028 ERICH6BQ5W0A0 696 aa14.19□□□□□ -0.14
CLCN6-208ENST00000494028 CHD2O14647 1828 aaKnown RBP14.19□□□□□ -0.14
CLCN6-208ENST00000494028 TERF2IPQ9NYB0 399 aa14.18□□□□□ -0.14
CLCN6-208ENST00000494028 RGPD8O14715 1765 aaPredicted RBP14.17□□□□□ -0.14
CLCN6-208ENST00000494028 WASLO00401 505 aaPredicted RBP14.17□□□□□ -0.14
CLCN6-208ENST00000494028 USP54Q70EL1 1684 aa14.17□□□□□ -0.14
CLCN6-208ENST00000494028 LRRC7Q96NW7 1537 aa14.16□□□□□ -0.14
CLCN6-208ENST00000494028 MAP2P11137 1827 aaKnown RBP14.16□□□□□ -0.14
CLCN6-208ENST00000494028 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-208ENST00000494028 TXNDC2Q86VQ3 553 aa14.16□□□□□ -0.14
CLCN6-208ENST00000494028 SALL2Q9Y467 1007 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-208ENST00000494028 PRR36Q9H6K5 1346 aa14.15□□□□□ -0.14
CLCN6-208ENST00000494028 NWD1Q149M9 1564 aa14.15□□□□□ -0.14
CLCN6-208ENST00000494028 PLPPR3Q6T4P5 718 aa14.15□□□□□ -0.14
CLCN6-208ENST00000494028 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
CLCN6-208ENST00000494028 CDK12Q9NYV4 1490 aaPredicted RBP14.14□□□□□ -0.15
CLCN6-208ENST00000494028 TNNT2P45379 298 aaPredicted RBP14.14□□□□□ -0.15
CLCN6-208ENST00000494028 CCDC146Q8IYE0 955 aa14.14□□□□□ -0.15
CLCN6-208ENST00000494028 PELP1Q8IZL8 1130 aaKnown RBP14.14□□□□□ -0.15
CLCN6-208ENST00000494028 EID1Q9Y6B2 187 aa14.14□□□□□ -0.15
CLCN6-208ENST00000494028 MARF1Q9Y4F3 1742 aaKnown RBP14.14□□□□□ -0.15
CLCN6-208ENST00000494028 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
CLCN6-208ENST00000494028 CABP1Q9NZU7 370 aa14.13□□□□□ -0.15
CLCN6-208ENST00000494028 PIK3R4Q99570 1358 aa14.12□□□□□ -0.15
CLCN6-208ENST00000494028 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
CLCN6-208ENST00000494028 FYB1O15117 783 aa14.12□□□□□ -0.15
CLCN6-208ENST00000494028 MTHFSP49914 203 aa14.12□□□□□ -0.15
CLCN6-208ENST00000494028 RRP1P56182 461 aaKnown RBP14.12□□□□□ -0.15
CLCN6-208ENST00000494028 SETD1BQ9UPS6 1966 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms