RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TSR3Q9UJK0 312 aaKnown RBP7.6□□□□□ -1.19
GTF3A-208ENST00000493903 PATL2C9JE40 543 aaKnown RBP7.59□□□□□ -1.19
GTF3A-208ENST00000493903 PPP4CP60510 307 aa7.59□□□□□ -1.19
GTF3A-208ENST00000493903 SLF2Q8IX21 1173 aa7.59□□□□□ -1.19
GTF3A-208ENST00000493903 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
GTF3A-208ENST00000493903 GJA5P36382 358 aa7.57□□□□□ -1.2
GTF3A-208ENST00000493903 RIC3Q7Z5B4 369 aa7.57□□□□□ -1.2
GTF3A-208ENST00000493903 MTMR14Q8NCE2 650 aa7.57□□□□□ -1.2
GTF3A-208ENST00000493903 SPTLC1O15269 473 aa7.56□□□□□ -1.2
GTF3A-208ENST00000493903 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
GTF3A-208ENST00000493903 TMCO4Q5TGY1 634 aa7.56□□□□□ -1.2
GTF3A-208ENST00000493903 CALR3Q96L12 384 aaKnown RBP7.56□□□□□ -1.2
GTF3A-208ENST00000493903 LIMD1Q9UGP4 676 aa7.56□□□□□ -1.2
GTF3A-208ENST00000493903 SLC10A3P09131 477 aa7.55□□□□□ -1.2
GTF3A-208ENST00000493903 SPIRE2Q8WWL2 714 aa7.55□□□□□ -1.2
GTF3A-208ENST00000493903 GDPD2Q9HCC8 539 aa7.55□□□□□ -1.2
GTF3A-208ENST00000493903 DDX11L8A8MPP1 907 aa7.54□□□□□ -1.2
GTF3A-208ENST00000493903 IRF5Q13568 498 aa7.54□□□□□ -1.2
GTF3A-208ENST00000493903 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
GTF3A-208ENST00000493903 APLP1P51693 650 aa7.53□□□□□ -1.2
GTF3A-208ENST00000493903 FBXO31Q5XUX0 539 aaPredicted RBP7.53□□□□□ -1.2
GTF3A-208ENST00000493903 NYAP1Q6ZVC0 841 aa7.53□□□□□ -1.2
GTF3A-208ENST00000493903 RDH13Q8NBN7 331 aa7.53□□□□□ -1.2
GTF3A-208ENST00000493903 GLMNQ92990 594 aa7.53□□□□□ -1.2
GTF3A-208ENST00000493903 CFHP08603 1231 aa7.52□□□□□ -1.21
GTF3A-208ENST00000493903 CD46P15529 392 aa7.52□□□□□ -1.21
GTF3A-208ENST00000493903 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
GTF3A-208ENST00000493903 SULF1Q8IWU6 871 aa7.52□□□□□ -1.21
GTF3A-208ENST00000493903 GZF1Q9H116 711 aaPredicted RBP7.52□□□□□ -1.21
GTF3A-208ENST00000493903 ABL2P42684 1182 aa7.51□□□□□ -1.21
GTF3A-208ENST00000493903 NUTM1Q86Y26 1132 aa7.51□□□□□ -1.21
GTF3A-208ENST00000493903 LILRB3O75022 631 aa7.5□□□□□ -1.21
GTF3A-208ENST00000493903 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
GTF3A-208ENST00000493903 RSPH4AQ5TD94 716 aa7.5□□□□□ -1.21
GTF3A-208ENST00000493903 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
GTF3A-208ENST00000493903 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
GTF3A-208ENST00000493903 TBC1D2BQ9UPU7 963 aa7.49□□□□□ -1.21
GTF3A-208ENST00000493903 POM121CA8CG34 1229 aa7.48□□□□□ -1.21
GTF3A-208ENST00000493903 BRD1O95696 1058 aa7.48□□□□□ -1.21
GTF3A-208ENST00000493903 KCNA1Q09470 495 aa7.48□□□□□ -1.21
GTF3A-208ENST00000493903 KMT5BQ4FZB7 885 aa7.48□□□□□ -1.21
GTF3A-208ENST00000493903 PRPF38BQ5VTL8 546 aaKnown RBP7.48□□□□□ -1.21
GTF3A-208ENST00000493903 ACTN4O43707 911 aaKnown RBP7.47□□□□□ -1.21
GTF3A-208ENST00000493903 AP1G2O75843 785 aa7.47□□□□□ -1.21
GTF3A-208ENST00000493903 GCGRP47871 477 aa7.47□□□□□ -1.21
GTF3A-208ENST00000493903 WASHC4Q2M389 1173 aa7.47□□□□□ -1.21
GTF3A-208ENST00000493903 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
GTF3A-208ENST00000493903 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
GTF3A-208ENST00000493903 NDUFB9Q9Y6M9 179 aa7.47□□□□□ -1.21
GTF3A-208ENST00000493903 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
GTF3A-208ENST00000493903 USP17L8P0C7I0 530 aa7.46□□□□□ -1.22
GTF3A-208ENST00000493903 COPS2P61201 443 aa7.46□□□□□ -1.22
GTF3A-208ENST00000493903 QPCTQ16769 361 aa7.46□□□□□ -1.22
GTF3A-208ENST00000493903 MTRQ99707 1265 aa7.46□□□□□ -1.22
GTF3A-208ENST00000493903 PLA2G2EQ9NZK7 142 aa7.46□□□□□ -1.22
GTF3A-208ENST00000493903 PCDHB3Q9Y5E6 796 aa7.46□□□□□ -1.22
GTF3A-208ENST00000493903 FUT2Q10981 343 aa7.45□□□□□ -1.22
GTF3A-208ENST00000493903 TJAP1Q5JTD0 557 aa7.45□□□□□ -1.22
GTF3A-208ENST00000493903 BLOC1S3Q6QNY0 202 aa7.45□□□□□ -1.22
GTF3A-208ENST00000493903 NUTM2BA6NNL0 878 aaPredicted RBP7.44□□□□□ -1.22
GTF3A-208ENST00000493903 NUTM2EB1AL46 878 aaPredicted RBP7.44□□□□□ -1.22
GTF3A-208ENST00000493903 ITGBL1O95965 494 aaPredicted RBP7.44□□□□□ -1.22
GTF3A-208ENST00000493903 CSB-PGBD3P0DP91 1061 aa7.44□□□□□ -1.22
GTF3A-208ENST00000493903 CSPP1Q1MSJ5 1256 aa7.44□□□□□ -1.22
GTF3A-208ENST00000493903 PUS10Q3MIT2 529 aaKnown RBP7.44□□□□□ -1.22
GTF3A-208ENST00000493903 RTL5Q5HYW3 569 aaPredicted RBP7.44□□□□□ -1.22
GTF3A-208ENST00000493903 HDGFL1Q5TGJ6 251 aa7.44□□□□□ -1.22
GTF3A-208ENST00000493903 NUTM2DQ5VT03 806 aaPredicted RBP7.44□□□□□ -1.22
GTF3A-208ENST00000493903 NUTM2AQ8IVF1 878 aaPredicted RBP7.44□□□□□ -1.22
GTF3A-208ENST00000493903 USP46P62068 366 aa7.43□□□□□ -1.22
GTF3A-208ENST00000493903 ZNF516Q92618 1163 aa7.43□□□□□ -1.22
GTF3A-208ENST00000493903 GJD4Q96KN9 370 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-208ENST00000493903 ZBTB3Q9H5J0 574 aa7.43□□□□□ -1.22
GTF3A-208ENST00000493903 PCDHB15Q9Y5E8 787 aa7.43□□□□□ -1.22
GTF3A-208ENST00000493903 KDM4AO75164 1064 aa7.42□□□□□ -1.22
GTF3A-208ENST00000493903 NDUFV2P19404 249 aa7.42□□□□□ -1.22
GTF3A-208ENST00000493903 SRPK2P78362 688 aaKnown RBP7.42□□□□□ -1.22
GTF3A-208ENST00000493903 KCNC4Q03721 635 aa7.42□□□□□ -1.22
GTF3A-208ENST00000493903 IL21Q9HBE4 155 aa7.42□□□□□ -1.22
GTF3A-208ENST00000493903 ATP6V1AP38606 617 aa7.41□□□□□ -1.22
GTF3A-208ENST00000493903 CFAP70Q5T0N1 1121 aa7.41□□□□□ -1.22
GTF3A-208ENST00000493903 MORN1Q5T089 497 aa7.4□□□□□ -1.22
GTF3A-208ENST00000493903 ADAMTS19Q8TE59 1207 aa7.4□□□□□ -1.22
GTF3A-208ENST00000493903 HLA-CQ95604 372 aa7.4□□□□□ -1.22
GTF3A-208ENST00000493903 PPP1R12CQ9BZL4 782 aa7.4□□□□□ -1.22
GTF3A-208ENST00000493903 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.39□□□□□ -1.23
GTF3A-208ENST00000493903 TLL1O43897 1013 aa7.39□□□□□ -1.23
GTF3A-208ENST00000493903 ZPR1O75312 459 aa7.39□□□□□ -1.23
GTF3A-208ENST00000493903 SOX11P35716 441 aa7.39□□□□□ -1.23
GTF3A-208ENST00000493903 SCUBE3Q8IX30 993 aa7.39□□□□□ -1.23
GTF3A-208ENST00000493903 NKX2-3Q8TAU0 364 aa7.39□□□□□ -1.23
GTF3A-208ENST00000493903 CABLES1Q8TDN4 633 aa7.39□□□□□ -1.23
GTF3A-208ENST00000493903 HOXA2O43364 376 aa7.38□□□□□ -1.23
GTF3A-208ENST00000493903 NR1I2O75469 434 aa7.38□□□□□ -1.23
GTF3A-208ENST00000493903 GRIPAP1Q4V328 841 aa7.38□□□□□ -1.23
GTF3A-208ENST00000493903 ALG2Q9H553 416 aa7.38□□□□□ -1.23
GTF3A-208ENST00000493903 AMOTL2Q9Y2J4 779 aa7.38□□□□□ -1.23
GTF3A-208ENST00000493903 SLC27A5Q9Y2P5 690 aa7.38□□□□□ -1.23
GTF3A-208ENST00000493903 RFX1P22670 979 aa7.37□□□□□ -1.23
GTF3A-208ENST00000493903 RBM25P49756 843 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms