RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 SYNMO15061 1565 aa10.47□□□□□ -0.73
GBP3-208ENST00000493594 ZMYM3Q14202 1370 aa10.47□□□□□ -0.73
GBP3-208ENST00000493594 NASPP49321 788 aaPredicted RBP10.47□□□□□ -0.73
GBP3-208ENST00000493594 MORC1Q86VD1 984 aa10.47□□□□□ -0.73
GBP3-208ENST00000493594 TSR2Q969E8 191 aaKnown RBP10.47□□□□□ -0.73
GBP3-208ENST00000493594 PHF23Q9BUL5 403 aaPredicted RBP10.47□□□□□ -0.73
GBP3-208ENST00000493594 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
GBP3-208ENST00000493594 SCAF11Q99590 1463 aaKnown RBP10.46□□□□□ -0.73
GBP3-208ENST00000493594 CD2BP2O95400 341 aaKnown RBP10.46□□□□□ -0.73
GBP3-208ENST00000493594 MSNP26038 577 aaKnown RBP10.46□□□□□ -0.73
GBP3-208ENST00000493594 RAB3GAP1Q15042 981 aa10.46□□□□□ -0.73
GBP3-208ENST00000493594 SKOR2Q2VWA4 1001 aaPredicted RBP10.46□□□□□ -0.73
GBP3-208ENST00000493594 WDR63Q8IWG1 891 aa10.46□□□□□ -0.73
GBP3-208ENST00000493594 ARID3AQ99856 593 aa10.46□□□□□ -0.73
GBP3-208ENST00000493594 LNPKQ9C0E8 428 aa10.46□□□□□ -0.73
GBP3-208ENST00000493594 FAM13BQ9NYF5 915 aa10.46□□□□□ -0.73
GBP3-208ENST00000493594 CFAP70Q5T0N1 1121 aa10.46□□□□□ -0.74
GBP3-208ENST00000493594 ZSCAN30Q86W11 494 aa10.46□□□□□ -0.74
GBP3-208ENST00000493594 SMC5Q8IY18 1101 aa10.46□□□□□ -0.74
GBP3-208ENST00000493594 ANP32BQ92688 251 aaKnown RBP10.46□□□□□ -0.74
GBP3-208ENST00000493594 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.74
GBP3-208ENST00000493594 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.74
GBP3-208ENST00000493594 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
GBP3-208ENST00000493594 SSFA2P28290 1259 aa10.45□□□□□ -0.74
GBP3-208ENST00000493594 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
GBP3-208ENST00000493594 TRIM27P14373 513 aa10.45□□□□□ -0.74
GBP3-208ENST00000493594 NCLP19338 710 aaKnown RBP10.45□□□□□ -0.74
GBP3-208ENST00000493594 RBM25P49756 843 aaKnown RBP10.45□□□□□ -0.74
GBP3-208ENST00000493594 R3HCC1Q9Y3T6 440 aaKnown RBP10.45□□□□□ -0.74
GBP3-208ENST00000493594 DDX49Q9Y6V7 483 aaKnown RBP10.45□□□□□ -0.74
GBP3-208ENST00000493594 PLXNC1O60486 1568 aa10.45□□□□□ -0.74
GBP3-208ENST00000493594 SAMD9LQ8IVG5 1584 aa10.45□□□□□ -0.74
GBP3-208ENST00000493594 POLR3AO14802 1390 aaPredicted RBP10.45□□□□□ -0.74
GBP3-208ENST00000493594 MTHFSP49914 203 aa10.44□□□□□ -0.74
GBP3-208ENST00000493594 SNX21Q969T3 373 aa10.44□□□□□ -0.74
GBP3-208ENST00000493594 OFD1O75665 1012 aa10.44□□□□□ -0.74
GBP3-208ENST00000493594 RIPK4P57078 832 aa10.44□□□□□ -0.74
GBP3-208ENST00000493594 EXOSC9Q06265 439 aaKnown RBP10.44□□□□□ -0.74
GBP3-208ENST00000493594 NCOA3Q9Y6Q9 1424 aa10.43□□□□□ -0.74
GBP3-208ENST00000493594 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
GBP3-208ENST00000493594 PPP1R9BQ96SB3 815 aa10.43□□□□□ -0.74
GBP3-208ENST00000493594 RNF17Q9BXT8 1623 aaKnown RBP10.43□□□□□ -0.74
GBP3-208ENST00000493594 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
GBP3-208ENST00000493594 U2AF1L5P0DN76 240 aaPredicted RBP10.43□□□□□ -0.74
GBP3-208ENST00000493594 U2AF1Q01081 240 aaKnown RBP eCLIP10.43□□□□□ -0.74
GBP3-208ENST00000493594 CIZ1Q9ULV3 898 aaPredicted RBP10.43□□□□□ -0.74
GBP3-208ENST00000493594 NOB1Q9ULX3 412 aaKnown RBP10.43□□□□□ -0.74
GBP3-208ENST00000493594 MYOM1P52179 1685 aa10.43□□□□□ -0.74
GBP3-208ENST00000493594 SSH1Q8WYL5 1049 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 KIF2CQ99661 725 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 SLC12A5Q9H2X9 1139 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 DDX19BQ9UMR2 479 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 ABCA8O94911 1581 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 GOLGA6L22H0YM25 854 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 TMEM57Q8N5G2 664 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 IQGAP1P46940 1657 aa10.42□□□□□ -0.74
GBP3-208ENST00000493594 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
GBP3-208ENST00000493594 UNC13BO14795 1591 aa10.41□□□□□ -0.74
GBP3-208ENST00000493594 K7ELQ4 463 aaPredicted RBP10.41□□□□□ -0.74
GBP3-208ENST00000493594 XPCQ01831 940 aaPredicted RBP10.41□□□□□ -0.74
GBP3-208ENST00000493594 ATF7IPQ6VMQ6 1270 aa10.41□□□□□ -0.74
GBP3-208ENST00000493594 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.41□□□□□ -0.74
GBP3-208ENST00000493594 MADDQ8WXG6 1647 aa10.41□□□□□ -0.74
GBP3-208ENST00000493594 ATP10AO60312 1499 aa10.4□□□□□ -0.74
GBP3-208ENST00000493594 MCTP1Q6DN14 999 aa10.4□□□□□ -0.74
GBP3-208ENST00000493594 MRC2Q9UBG0 1479 aa10.4□□□□□ -0.74
GBP3-208ENST00000493594 BAG4O95429 457 aaKnown RBP10.4□□□□□ -0.74
GBP3-208ENST00000493594 NUCB1Q02818 461 aa10.4□□□□□ -0.74
GBP3-208ENST00000493594 ANKRD45Q5TZF3 282 aa10.4□□□□□ -0.74
GBP3-208ENST00000493594 CAVIN1Q6NZI2 390 aaKnown RBP10.4□□□□□ -0.74
GBP3-208ENST00000493594 CHD1LQ86WJ1 897 aa10.4□□□□□ -0.74
GBP3-208ENST00000493594 CDC42BPBQ9Y5S2 1711 aa10.4□□□□□ -0.74
GBP3-208ENST00000493594 ERVK-7P63135 1459 aa10.4□□□□□ -0.75
GBP3-208ENST00000493594 IFT140Q96RY7 1462 aa10.4□□□□□ -0.75
GBP3-208ENST00000493594 IQGAP3Q86VI3 1631 aa10.4□□□□□ -0.75
GBP3-208ENST00000493594 SCAPERQ9BY12 1400 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 NSD3Q9BZ95 1437 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 PTMSP20962 102 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 KLHL40Q2TBA0 621 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 ARHGAP5Q13017 1502 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 CALD1Q05682 793 aaKnown RBP10.39□□□□□ -0.75
GBP3-208ENST00000493594 CCDC27Q2M243 656 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 ZBTB40Q9NUA8 1239 aa10.39□□□□□ -0.75
GBP3-208ENST00000493594 KDM5AP29375 1690 aaKnown RBP10.39□□□□□ -0.75
GBP3-208ENST00000493594 PRDM4Q9UKN5 801 aa10.38□□□□□ -0.75
GBP3-208ENST00000493594 ADGRF5Q8IZF2 1346 aa10.38□□□□□ -0.75
GBP3-208ENST00000493594 U2SURPO15042 1029 aaKnown RBP10.38□□□□□ -0.75
GBP3-208ENST00000493594 RBSNQ9H1K0 784 aa10.38□□□□□ -0.75
GBP3-208ENST00000493594 UQCRHLA0A096LP55 91 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 UQCRHP07919 91 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 TBC1D9Q6ZT07 1266 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 C1orf115Q9H7X2 142 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 TRAK1Q9UPV9 953 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 ZSCAN23Q3MJ62 389 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 IQSEC2Q5JU85 1478 aa10.37□□□□□ -0.75
GBP3-208ENST00000493594 CEP152O94986 1710 aa10.36□□□□□ -0.75
GBP3-208ENST00000493594 PRIM1P49642 420 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms