RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 UQCRHP07919 91 aa14.64□□□□□ -0.07
HDAC4-210ENST00000493582 SSFA2P28290 1259 aa14.64□□□□□ -0.07
HDAC4-210ENST00000493582 SNX21Q969T3 373 aa14.64□□□□□ -0.07
HDAC4-210ENST00000493582 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-210ENST00000493582 PLB1Q6P1J6 1458 aa14.63□□□□□ -0.07
HDAC4-210ENST00000493582 TERF1P54274 439 aa14.63□□□□□ -0.07
HDAC4-210ENST00000493582 NGEFQ8N5V2 710 aa14.63□□□□□ -0.07
HDAC4-210ENST00000493582 RBM25P49756 843 aaKnown RBP14.63□□□□□ -0.07
HDAC4-210ENST00000493582 CDCA8Q53HL2 280 aa14.63□□□□□ -0.07
HDAC4-210ENST00000493582 FTSJ3Q8IY81 847 aaKnown RBP14.63□□□□□ -0.07
HDAC4-210ENST00000493582 MAP7D2Q96T17 732 aa14.63□□□□□ -0.07
HDAC4-210ENST00000493582 SHANK2Q9UPX8 1470 aa14.62□□□□□ -0.07
HDAC4-210ENST00000493582 ZHX1Q9UKY1 873 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-210ENST00000493582 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-210ENST00000493582 TCP11L2Q8N4U5 519 aa14.62□□□□□ -0.07
HDAC4-210ENST00000493582 PLEKHD1A6NEE1 506 aa14.61□□□□□ -0.07
HDAC4-210ENST00000493582 NCLP19338 710 aaKnown RBP14.61□□□□□ -0.07
HDAC4-210ENST00000493582 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
HDAC4-210ENST00000493582 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.61□□□□□ -0.07
HDAC4-210ENST00000493582 LAMC1P11047 1609 aa14.61□□□□□ -0.07
HDAC4-210ENST00000493582 DZIP1LQ8IYY4 767 aaKnown RBP14.6□□□□□ -0.07
HDAC4-210ENST00000493582 KIF2CQ99661 725 aa14.6□□□□□ -0.07
HDAC4-210ENST00000493582 CARD14Q9BXL6 1004 aa14.6□□□□□ -0.07
HDAC4-210ENST00000493582 NOL7Q9UMY1 257 aaKnown RBP14.59□□□□□ -0.07
HDAC4-210ENST00000493582 GOLGA6L22H0YM25 854 aa14.59□□□□□ -0.07
HDAC4-210ENST00000493582 KLHL40Q2TBA0 621 aa14.59□□□□□ -0.07
HDAC4-210ENST00000493582 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
HDAC4-210ENST00000493582 PLXNC1O60486 1568 aa14.59□□□□□ -0.07
HDAC4-210ENST00000493582 CCDC141Q6ZP82 1450 aa14.59□□□□□ -0.07
HDAC4-210ENST00000493582 PTMSP20962 102 aa14.59□□□□□ -0.07
HDAC4-210ENST00000493582 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
HDAC4-210ENST00000493582 GAS2L2Q8NHY3 880 aa14.58□□□□□ -0.08
HDAC4-210ENST00000493582 NPC1L1Q9UHC9 1359 aa14.58□□□□□ -0.08
HDAC4-210ENST00000493582 BAG4O95429 457 aaKnown RBP14.58□□□□□ -0.08
HDAC4-210ENST00000493582 ITPRIPQ8IWB1 547 aa14.58□□□□□ -0.08
HDAC4-210ENST00000493582 LNPKQ9C0E8 428 aa14.58□□□□□ -0.08
HDAC4-210ENST00000493582 RBSNQ9H1K0 784 aa14.58□□□□□ -0.08
HDAC4-210ENST00000493582 ZNF500O60304 480 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-210ENST00000493582 SMAP1Q8IYB5 467 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-210ENST00000493582 RUNDC1Q96C34 613 aa14.57□□□□□ -0.08
HDAC4-210ENST00000493582 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
HDAC4-210ENST00000493582 K7ELQ4 463 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-210ENST00000493582 NUP160Q12769 1436 aa14.56□□□□□ -0.08
HDAC4-210ENST00000493582 HDAC1Q13547 482 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-210ENST00000493582 MCTP1Q6DN14 999 aa14.56□□□□□ -0.08
HDAC4-210ENST00000493582 MYO5CQ9NQX4 1742 aa14.56□□□□□ -0.08
HDAC4-210ENST00000493582 WDR63Q8IWG1 891 aa14.55□□□□□ -0.08
HDAC4-210ENST00000493582 EIF2AK4Q9P2K8 1649 aaKnown RBP14.55□□□□□ -0.08
HDAC4-210ENST00000493582 TRIM27P14373 513 aa14.55□□□□□ -0.08
HDAC4-210ENST00000493582 PRIM1P49642 420 aaKnown RBP14.55□□□□□ -0.08
HDAC4-210ENST00000493582 ZSCAN23Q3MJ62 389 aa14.55□□□□□ -0.08
HDAC4-210ENST00000493582 SYNMO15061 1565 aa14.55□□□□□ -0.08
HDAC4-210ENST00000493582 TSR2Q969E8 191 aaKnown RBP14.55□□□□□ -0.08
HDAC4-210ENST00000493582 HS1BP3Q53T59 392 aa14.54□□□□□ -0.08
HDAC4-210ENST00000493582 SYNJ2O15056 1496 aa14.54□□□□□ -0.08
HDAC4-210ENST00000493582 DYNC1I1O14576 645 aa14.54□□□□□ -0.08
HDAC4-210ENST00000493582 ZNF445P59923 1031 aa14.54□□□□□ -0.08
HDAC4-210ENST00000493582 PHF23Q9BUL5 403 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-210ENST00000493582 SMC4Q9NTJ3 1288 aa14.54□□□□□ -0.08
HDAC4-210ENST00000493582 IBTKQ9P2D0 1353 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-210ENST00000493582 PDLIM2Q96JY6 352 aa14.53□□□□□ -0.08
HDAC4-210ENST00000493582 ZKSCAN5Q9Y2L8 839 aa14.53□□□□□ -0.08
HDAC4-210ENST00000493582 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
HDAC4-210ENST00000493582 JARID2Q92833 1246 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-210ENST00000493582 RBM27Q9P2N5 1060 aaKnown RBP14.52□□□□□ -0.09
HDAC4-210ENST00000493582 DDX19BQ9UMR2 479 aa14.52□□□□□ -0.09
HDAC4-210ENST00000493582 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.09
HDAC4-210ENST00000493582 POLR3AO14802 1390 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-210ENST00000493582 MTERF4Q7Z6M4 381 aaKnown RBP14.51□□□□□ -0.09
HDAC4-210ENST00000493582 CLEC17AQ6ZS10 378 aa14.51□□□□□ -0.09
HDAC4-210ENST00000493582 ARHGEF5Q12774 1597 aa14.51□□□□□ -0.09
HDAC4-210ENST00000493582 NUCB1Q02818 461 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 PKP1Q13835 747 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 MORC1Q86VD1 984 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 TMEM57Q8N5G2 664 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 SSH1Q8WYL5 1049 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 LMBRD1Q9NUN5 540 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 AK9Q5TCS8 1911 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 CHD1LQ86WJ1 897 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 TSC1Q92574 1164 aa14.5□□□□□ -0.09
HDAC4-210ENST00000493582 EXOSC9Q06265 439 aaKnown RBP14.49□□□□□ -0.09
HDAC4-210ENST00000493582 SASS6Q6UVJ0 657 aa14.49□□□□□ -0.09
HDAC4-210ENST00000493582 NOB1Q9ULX3 412 aaKnown RBP14.49□□□□□ -0.09
HDAC4-210ENST00000493582 SCAF11Q99590 1463 aaKnown RBP14.49□□□□□ -0.09
HDAC4-210ENST00000493582 PRPF40AO75400 957 aaKnown RBP14.48□□□□□ -0.09
HDAC4-210ENST00000493582 ZSCAN20P17040 1043 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-210ENST00000493582 ATF7IPQ6VMQ6 1270 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 CHAMP1Q96JM3 812 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 CCDC94Q9BW85 323 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-210ENST00000493582 MAGI1Q96QZ7 1491 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-210ENST00000493582 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
HDAC4-210ENST00000493582 FGD1P98174 961 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 ZBTB40Q9NUA8 1239 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 MYOM1P52179 1685 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 DMTNQ08495 405 aa14.48□□□□□ -0.09
HDAC4-210ENST00000493582 BMP2KLQ5H9B9 411 aa14.47□□□□□ -0.09
HDAC4-210ENST00000493582 ANKRD45Q5TZF3 282 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms