RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
CCNB3-208ENST00000493507 LIMD1Q9UGP4 676 aa9.51□□□□□ -0.89
CCNB3-208ENST00000493507 SALL2Q9Y467 1007 aaPredicted RBP9.51□□□□□ -0.89
CCNB3-208ENST00000493507 COPS2P61201 443 aa9.5□□□□□ -0.89
CCNB3-208ENST00000493507 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
CCNB3-208ENST00000493507 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
CCNB3-208ENST00000493507 HLA-CQ95604 372 aa9.5□□□□□ -0.89
CCNB3-208ENST00000493507 MTRQ99707 1265 aa9.5□□□□□ -0.89
CCNB3-208ENST00000493507 IL21Q9HBE4 155 aa9.5□□□□□ -0.89
CCNB3-208ENST00000493507 GUCA2AQ02747 115 aa9.49□□□□□ -0.89
CCNB3-208ENST00000493507 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
CCNB3-208ENST00000493507 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCNB3-208ENST00000493507 PCDHGC3Q9UN70 934 aa9.49□□□□□ -0.89
CCNB3-208ENST00000493507 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
CCNB3-208ENST00000493507 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
CCNB3-208ENST00000493507 CSPP1Q1MSJ5 1256 aa9.48□□□□□ -0.89
CCNB3-208ENST00000493507 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
CCNB3-208ENST00000493507 C6orf229H3BNL8 230 aa9.47□□□□□ -0.89
CCNB3-208ENST00000493507 ZPR1O75312 459 aa9.47□□□□□ -0.89
CCNB3-208ENST00000493507 FMNL1O95466 1100 aaPredicted RBP9.47□□□□□ -0.89
CCNB3-208ENST00000493507 MTMR2Q13614 643 aa9.47□□□□□ -0.89
CCNB3-208ENST00000493507 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
CCNB3-208ENST00000493507 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
CCNB3-208ENST00000493507 LILRB3O75022 631 aa9.46□□□□□ -0.9
CCNB3-208ENST00000493507 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
CCNB3-208ENST00000493507 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
CCNB3-208ENST00000493507 NUTM2AQ8IVF1 878 aaPredicted RBP9.46□□□□□ -0.9
CCNB3-208ENST00000493507 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
CCNB3-208ENST00000493507 KCNC4Q03721 635 aa9.45□□□□□ -0.9
CCNB3-208ENST00000493507 THAP11Q96EK4 314 aa9.45□□□□□ -0.9
CCNB3-208ENST00000493507 HRCP23327 699 aa9.44□□□□□ -0.9
CCNB3-208ENST00000493507 QPCTQ16769 361 aa9.44□□□□□ -0.9
CCNB3-208ENST00000493507 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
CCNB3-208ENST00000493507 RETREG3Q86VR2 466 aa9.44□□□□□ -0.9
CCNB3-208ENST00000493507 CABLES1Q8TDN4 633 aa9.43□□□□□ -0.9
CCNB3-208ENST00000493507 SPSB2Q99619 263 aa9.43□□□□□ -0.9
CCNB3-208ENST00000493507 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
CCNB3-208ENST00000493507 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
CCNB3-208ENST00000493507 ZNF516Q92618 1163 aa9.42□□□□□ -0.9
CCNB3-208ENST00000493507 SYMPKQ92797 1274 aaKnown RBP9.42□□□□□ -0.9
CCNB3-208ENST00000493507 ADH1BP00325 375 aa9.41□□□□□ -0.9
CCNB3-208ENST00000493507 SMARCA4P51532 1647 aa9.41□□□□□ -0.9
CCNB3-208ENST00000493507 TMEM259Q4ZIN3 620 aa9.4□□□□□ -0.9
CCNB3-208ENST00000493507 RTL5Q5HYW3 569 aaPredicted RBP9.4□□□□□ -0.9
CCNB3-208ENST00000493507 RFC5P40937 340 aa9.39□□□□□ -0.91
CCNB3-208ENST00000493507 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
CCNB3-208ENST00000493507 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
CCNB3-208ENST00000493507 TLL1O43897 1013 aa9.38□□□□□ -0.91
CCNB3-208ENST00000493507 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
CCNB3-208ENST00000493507 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
CCNB3-208ENST00000493507 FAM160A2Q8N612 972 aaPredicted RBP9.37□□□□□ -0.91
CCNB3-208ENST00000493507 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
CCNB3-208ENST00000493507 CFAP99D6REC4 459 aa9.36□□□□□ -0.91
CCNB3-208ENST00000493507 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
CCNB3-208ENST00000493507 FBXO31Q5XUX0 539 aaPredicted RBP9.36□□□□□ -0.91
CCNB3-208ENST00000493507 NKX2-3Q8TAU0 364 aa9.36□□□□□ -0.91
CCNB3-208ENST00000493507 SLC6A16Q9GZN6 736 aa9.36□□□□□ -0.91
CCNB3-208ENST00000493507 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
CCNB3-208ENST00000493507 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
CCNB3-208ENST00000493507 AP1G2O75843 785 aa9.34□□□□□ -0.91
CCNB3-208ENST00000493507 JUNDP17535 347 aa9.34□□□□□ -0.91
CCNB3-208ENST00000493507 GGCXP38435 758 aa9.34□□□□□ -0.91
CCNB3-208ENST00000493507 TSC1Q92574 1164 aa9.34□□□□□ -0.91
CCNB3-208ENST00000493507 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
CCNB3-208ENST00000493507 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
CCNB3-208ENST00000493507 MMP16P51512 607 aa9.33□□□□□ -0.92
CCNB3-208ENST00000493507 DXOO77932 396 aaKnown RBP9.32□□□□□ -0.92
CCNB3-208ENST00000493507 S1PR4O95977 384 aa9.31□□□□□ -0.92
CCNB3-208ENST00000493507 LYPD8Q6UX82 237 aa9.31□□□□□ -0.92
CCNB3-208ENST00000493507 CTDSPL2Q05D32 466 aa9.3□□□□□ -0.92
CCNB3-208ENST00000493507 FLIIQ13045 1269 aa9.3□□□□□ -0.92
CCNB3-208ENST00000493507 PTPRNQ16849 979 aa9.3□□□□□ -0.92
CCNB3-208ENST00000493507 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
CCNB3-208ENST00000493507 PEG3Q9GZU2 1588 aa9.29□□□□□ -0.92
CCNB3-208ENST00000493507 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
CCNB3-208ENST00000493507 APBB1O00213 710 aa9.28□□□□□ -0.92
CCNB3-208ENST00000493507 USP17L8P0C7I0 530 aa9.28□□□□□ -0.92
CCNB3-208ENST00000493507 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
CCNB3-208ENST00000493507 WIZO95785 1651 aa9.28□□□□□ -0.92
CCNB3-208ENST00000493507 BAZ1AQ9NRL2 1556 aaPredicted RBP9.28□□□□□ -0.92
CCNB3-208ENST00000493507 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
CCNB3-208ENST00000493507 NUDT12Q9BQG2 462 aa9.27□□□□□ -0.93
CCNB3-208ENST00000493507 HMGXB3Q12766 1538 aa9.26□□□□□ -0.93
CCNB3-208ENST00000493507 RNF223E7ERA6 249 aa9.26□□□□□ -0.93
CCNB3-208ENST00000493507 SOCS7O14512 581 aa9.26□□□□□ -0.93
CCNB3-208ENST00000493507 PER1O15534 1290 aaPredicted RBP9.26□□□□□ -0.93
CCNB3-208ENST00000493507 CCNYL3P0C7X3 344 aa9.26□□□□□ -0.93
CCNB3-208ENST00000493507 ANKLE1Q8NAG6 615 aa9.25□□□□□ -0.93
CCNB3-208ENST00000493507 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
CCNB3-208ENST00000493507 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
CCNB3-208ENST00000493507 MCM6Q14566 821 aa9.24□□□□□ -0.93
CCNB3-208ENST00000493507 CCDC24Q8N4L8 307 aa9.24□□□□□ -0.93
CCNB3-208ENST00000493507 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
CCNB3-208ENST00000493507 SNRKQ9NRH2 765 aa9.24□□□□□ -0.93
CCNB3-208ENST00000493507 FCF1Q9Y324 198 aaKnown RBP9.24□□□□□ -0.93
CCNB3-208ENST00000493507 CTHP32929 405 aa9.23□□□□□ -0.93
CCNB3-208ENST00000493507 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
CCNB3-208ENST00000493507 SMARCA2P51531 1590 aa9.23□□□□□ -0.93
CCNB3-208ENST00000493507 A0A0G2JS52 829 aa9.22□□□□□ -0.93
CCNB3-208ENST00000493507 PPEF1O14829 653 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms