RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ZNF644Q9H582 1327 aaPredicted RBP19.75■□□□□ 0.75
BRAT1-206ENST00000493232 GPRASP1Q5JY77 1395 aa19.75■□□□□ 0.75
BRAT1-206ENST00000493232 VPS37CA5D8V6 355 aaPredicted RBP19.75■□□□□ 0.75
BRAT1-206ENST00000493232 NLRP6P59044 892 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 GAS2L2Q8NHY3 880 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 CASKIN1Q8WXD9 1431 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 CCDC73Q6ZRK6 1079 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 CABP2Q9NPB3 220 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 WASHC2AQ641Q2 1341 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 CDC45O75419 566 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 CCDC43Q96MW1 224 aaKnown RBP19.74■□□□□ 0.75
BRAT1-206ENST00000493232 LRRC9Q6ZRR7 1453 aa19.74■□□□□ 0.75
BRAT1-206ENST00000493232 NEUROD6Q96NK8 337 aa19.73■□□□□ 0.75
BRAT1-206ENST00000493232 LNPKQ9C0E8 428 aa19.73■□□□□ 0.75
BRAT1-206ENST00000493232 GNAI3P08754 354 aa19.73■□□□□ 0.75
BRAT1-206ENST00000493232 PRDM2Q13029 1718 aa19.72■□□□□ 0.75
BRAT1-206ENST00000493232 SASS6Q6UVJ0 657 aa19.72■□□□□ 0.75
BRAT1-206ENST00000493232 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
BRAT1-206ENST00000493232 NCOA2Q15596 1464 aa19.71■□□□□ 0.75
BRAT1-206ENST00000493232 FANCIQ9NVI1 1328 aa19.71■□□□□ 0.75
BRAT1-206ENST00000493232 WASHC4Q2M389 1173 aa19.71■□□□□ 0.75
BRAT1-206ENST00000493232 CCDC30Q5VVM6 783 aa19.71■□□□□ 0.75
BRAT1-206ENST00000493232 PSMA5P28066 241 aa19.71■□□□□ 0.75
BRAT1-206ENST00000493232 C22orf23Q9BZE7 217 aa19.71■□□□□ 0.74
BRAT1-206ENST00000493232 BRMS1Q9HCU9 246 aa19.71■□□□□ 0.74
BRAT1-206ENST00000493232 AIMP1Q12904 312 aaKnown RBP19.7■□□□□ 0.74
BRAT1-206ENST00000493232 SCAPERQ9BY12 1400 aa19.7■□□□□ 0.74
BRAT1-206ENST00000493232 RSPH6AQ9H0K4 717 aa19.69■□□□□ 0.74
BRAT1-206ENST00000493232 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
BRAT1-206ENST00000493232 XBP1P17861 261 aa19.69■□□□□ 0.74
BRAT1-206ENST00000493232 PLEKHO1Q53GL0 409 aaPredicted RBP19.69■□□□□ 0.74
BRAT1-206ENST00000493232 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.68■□□□□ 0.74
BRAT1-206ENST00000493232 SYNJ2O15056 1496 aa19.68■□□□□ 0.74
BRAT1-206ENST00000493232 CLASRPQ8N2M8 674 aaKnown RBP19.68■□□□□ 0.74
BRAT1-206ENST00000493232 MTHFSP49914 203 aa19.68■□□□□ 0.74
BRAT1-206ENST00000493232 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
BRAT1-206ENST00000493232 SETQ01105 290 aaPredicted RBP19.67■□□□□ 0.74
BRAT1-206ENST00000493232 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
BRAT1-206ENST00000493232 HOMER1Q86YM7 354 aa19.67■□□□□ 0.74
BRAT1-206ENST00000493232 ZNF592Q92610 1267 aa19.67■□□□□ 0.74
BRAT1-206ENST00000493232 HFM1A2PYH4 1435 aa19.67■□□□□ 0.74
BRAT1-206ENST00000493232 TBC1D2BQ9UPU7 963 aa19.66■□□□□ 0.74
BRAT1-206ENST00000493232 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.66■□□□□ 0.74
BRAT1-206ENST00000493232 CWC22Q9HCG8 908 aaKnown RBP19.66■□□□□ 0.74
BRAT1-206ENST00000493232 SMG6Q86US8 1419 aaKnown RBP19.66■□□□□ 0.74
BRAT1-206ENST00000493232 KIF21BO75037 1637 aa19.66■□□□□ 0.74
BRAT1-206ENST00000493232 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.747e-7■■■■□ 20.8
BRAT1-206ENST00000493232 PANK1Q8TE04 598 aa19.66■□□□□ 0.74
BRAT1-206ENST00000493232 HIP1O00291 1037 aa19.65■□□□□ 0.74
BRAT1-206ENST00000493232 CCDC27Q2M243 656 aa19.65■□□□□ 0.74
BRAT1-206ENST00000493232 FSD1Q9BTV5 496 aa19.65■□□□□ 0.74
BRAT1-206ENST00000493232 SART3Q15020 963 aaKnown RBP19.65■□□□□ 0.74
BRAT1-206ENST00000493232 NUTM2GQ5VZR2 741 aa19.65■□□□□ 0.74
BRAT1-206ENST00000493232 TCP11L2Q8N4U5 519 aa19.65■□□□□ 0.74
BRAT1-206ENST00000493232 ABTB2Q8N961 1025 aa19.64■□□□□ 0.74
BRAT1-206ENST00000493232 HSP90AA2PQ14568 343 aaPredicted RBP19.64■□□□□ 0.73
BRAT1-206ENST00000493232 ERC1Q8IUD2 1116 aa19.63■□□□□ 0.73
BRAT1-206ENST00000493232 ADAMTS8Q9UP79 889 aa19.63■□□□□ 0.73
BRAT1-206ENST00000493232 NAT10Q9H0A0 1025 aaKnown RBP19.63■□□□□ 0.73
BRAT1-206ENST00000493232 PLEKHH2Q8IVE3 1493 aa19.63■□□□□ 0.73
BRAT1-206ENST00000493232 KIF6Q6ZMV9 814 aa19.63■□□□□ 0.73
BRAT1-206ENST00000493232 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
BRAT1-206ENST00000493232 TXNDC2Q86VQ3 553 aa19.62■□□□□ 0.73
BRAT1-206ENST00000493232 SURF6O75683 361 aaKnown RBP19.61■□□□□ 0.73
BRAT1-206ENST00000493232 OLFM4Q6UX06 510 aa19.61■□□□□ 0.73
BRAT1-206ENST00000493232 PPP2R1AP30153 589 aa19.61■□□□□ 0.73
BRAT1-206ENST00000493232 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
BRAT1-206ENST00000493232 PRKAR2BP31323 418 aa19.61■□□□□ 0.73
BRAT1-206ENST00000493232 MCM2P49736 904 aa19.6■□□□□ 0.73
BRAT1-206ENST00000493232 ESCO1Q5FWF5 840 aa19.6■□□□□ 0.73
BRAT1-206ENST00000493232 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
BRAT1-206ENST00000493232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.6■□□□□ 0.73
BRAT1-206ENST00000493232 FYB1O15117 783 aa19.59■□□□□ 0.73
BRAT1-206ENST00000493232 ANO8Q9HCE9 1232 aaPredicted RBP19.59■□□□□ 0.73
BRAT1-206ENST00000493232 SLC3A2P08195 630 aaKnown RBP19.59■□□□□ 0.73
BRAT1-206ENST00000493232 FOSBP53539 338 aa19.59■□□□□ 0.73
BRAT1-206ENST00000493232 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
BRAT1-206ENST00000493232 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
BRAT1-206ENST00000493232 ZNF692Q9BU19 519 aaPredicted RBP19.58■□□□□ 0.73
BRAT1-206ENST00000493232 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.73
BRAT1-206ENST00000493232 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.73
BRAT1-206ENST00000493232 TWISTNBQ3B726 338 aaPredicted RBP19.58■□□□□ 0.72
BRAT1-206ENST00000493232 GCC1Q96CN9 775 aa19.58■□□□□ 0.72
BRAT1-206ENST00000493232 CDR1P51861 262 aa19.58■□□□□ 0.72
BRAT1-206ENST00000493232 PDCP20941 246 aa19.57■□□□□ 0.72
BRAT1-206ENST00000493232 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.57■□□□□ 0.72
BRAT1-206ENST00000493232 CFTRP13569 1480 aa19.57■□□□□ 0.72
BRAT1-206ENST00000493232 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
BRAT1-206ENST00000493232 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
BRAT1-206ENST00000493232 R3HCC1Q9Y3T6 440 aaKnown RBP19.57■□□□□ 0.72
BRAT1-206ENST00000493232 CT47A1Q5JQC4 288 aaPredicted RBP19.57■□□□□ 0.72
BRAT1-206ENST00000493232 TEX35Q5T0J7 233 aa19.57■□□□□ 0.72
BRAT1-206ENST00000493232 LETM1O95202 739 aaPredicted RBP19.56■□□□□ 0.72
BRAT1-206ENST00000493232 GNAI2P04899 355 aa19.56■□□□□ 0.72
BRAT1-206ENST00000493232 SDF4Q9BRK5 362 aa19.56■□□□□ 0.72
BRAT1-206ENST00000493232 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
BRAT1-206ENST00000493232 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
BRAT1-206ENST00000493232 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
BRAT1-206ENST00000493232 PDE3AQ14432 1141 aa19.56■□□□□ 0.72
BRAT1-206ENST00000493232 ACBD3Q9H3P7 528 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms