RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
TSC22D4-205ENST00000493217 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
TSC22D4-205ENST00000493217 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
TSC22D4-205ENST00000493217 CGNL1Q0VF96 1302 aa24.8■■□□□ 1.56
TSC22D4-205ENST00000493217 ANKRD36BQ8N2N9 1353 aa24.8■■□□□ 1.56
TSC22D4-205ENST00000493217 SPINK5Q9NQ38 1064 aaPredicted RBP24.79■■□□□ 1.56
TSC22D4-205ENST00000493217 C20orf194Q5TEA3 1177 aa24.78■■□□□ 1.56
TSC22D4-205ENST00000493217 FBXO31Q5XUX0 539 aaPredicted RBP24.77■■□□□ 1.56
TSC22D4-205ENST00000493217 SHPRHQ149N8 1683 aa24.77■■□□□ 1.56
TSC22D4-205ENST00000493217 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
TSC22D4-205ENST00000493217 NKTRP30414 1462 aaKnown RBP24.75■■□□□ 1.55
TSC22D4-205ENST00000493217 E9PSI1 815 aa24.75■■□□□ 1.55
TSC22D4-205ENST00000493217 TNNT2P45379 298 aaPredicted RBP24.75■■□□□ 1.55
TSC22D4-205ENST00000493217 CABP2Q9NPB3 220 aa24.75■■□□□ 1.55
TSC22D4-205ENST00000493217 NSD2O96028 1365 aa24.74■■□□□ 1.55
TSC22D4-205ENST00000493217 TCERG1O14776 1098 aaKnown RBP24.74■■□□□ 1.55
TSC22D4-205ENST00000493217 PPP6R1Q9UPN7 881 aa24.73■■□□□ 1.55
TSC22D4-205ENST00000493217 AGLP35573 1532 aa24.73■■□□□ 1.55
TSC22D4-205ENST00000493217 PTPRMP28827 1452 aa24.73■■□□□ 1.55
TSC22D4-205ENST00000493217 SAFB2Q14151 953 aaKnown RBP eCLIP24.73■■□□□ 1.55
TSC22D4-205ENST00000493217 STK26Q9P289 416 aa24.73■■□□□ 1.55
TSC22D4-205ENST00000493217 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.72■■□□□ 1.55
TSC22D4-205ENST00000493217 NINLQ9Y2I6 1382 aa24.72■■□□□ 1.55
TSC22D4-205ENST00000493217 TSPOAP1O95153 1857 aa24.71■■□□□ 1.55
TSC22D4-205ENST00000493217 MTHFSP49914 203 aa24.71■■□□□ 1.55
TSC22D4-205ENST00000493217 DMRT2Q9Y5R5 561 aa24.71■■□□□ 1.55
TSC22D4-205ENST00000493217 WWC1Q8IX03 1113 aa24.7■■□□□ 1.54
TSC22D4-205ENST00000493217 YTHDC2Q9H6S0 1430 aaKnown RBP24.7■■□□□ 1.54
TSC22D4-205ENST00000493217 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
TSC22D4-205ENST00000493217 SENP3Q9H4L4 574 aaPredicted RBP24.68■■□□□ 1.54
TSC22D4-205ENST00000493217 A0A1W2PP64 1363 aa24.67■■□□□ 1.54
TSC22D4-205ENST00000493217 ALKQ9UM73 1620 aa24.67■■□□□ 1.54
TSC22D4-205ENST00000493217 ABCC11Q96J66 1382 aa24.67■■□□□ 1.54
TSC22D4-205ENST00000493217 MS4A1P11836 297 aa24.66■■□□□ 1.54
TSC22D4-205ENST00000493217 SRPK2P78362 688 aaKnown RBP24.66■■□□□ 1.54
TSC22D4-205ENST00000493217 PRAM1Q96QH2 718 aa24.66■■□□□ 1.54
TSC22D4-205ENST00000493217 CFAP53Q96M91 514 aa24.66■■□□□ 1.54
TSC22D4-205ENST00000493217 IQSEC2Q5JU85 1478 aa24.65■■□□□ 1.54
TSC22D4-205ENST00000493217 ATAD2Q6PL18 1390 aa24.65■■□□□ 1.54
TSC22D4-205ENST00000493217 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
TSC22D4-205ENST00000493217 KDM2BQ8NHM5 1336 aa24.64■■□□□ 1.54
TSC22D4-205ENST00000493217 ERICH6Q7L0X2 663 aa24.64■■□□□ 1.53
TSC22D4-205ENST00000493217 CLTCQ00610 1675 aaKnown RBP24.63■■□□□ 1.53
TSC22D4-205ENST00000493217 STAG3Q9UJ98 1225 aa24.63■■□□□ 1.53
TSC22D4-205ENST00000493217 TCP11L2Q8N4U5 519 aa24.63■■□□□ 1.53
TSC22D4-205ENST00000493217 POGKQ9P215 609 aa24.63■■□□□ 1.53
TSC22D4-205ENST00000493217 BCAR3O75815 825 aa24.62■■□□□ 1.53
TSC22D4-205ENST00000493217 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
TSC22D4-205ENST00000493217 SPATA31D1Q6ZQQ2 1576 aa24.62■■□□□ 1.53
TSC22D4-205ENST00000493217 A2ML1A8K2U0 1454 aa24.6■■□□□ 1.53
TSC22D4-205ENST00000493217 CD163L1Q9NR16 1453 aa24.6■■□□□ 1.53
TSC22D4-205ENST00000493217 PDE4AP27815 886 aa24.6■■□□□ 1.53
TSC22D4-205ENST00000493217 ANP32AP39687 249 aaKnown RBP24.6■■□□□ 1.53
TSC22D4-205ENST00000493217 CCDC27Q2M243 656 aa24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 NCBP3Q53F19 620 aaKnown RBP24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 CENPQQ7L2Z9 268 aaPredicted RBP24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 BACH2Q9BYV9 841 aa24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 TERF2IPQ9NYB0 399 aa24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 ARHGEF40Q8TER5 1519 aa24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 NEUROD2Q15784 382 aa24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 RRP7AQ9Y3A4 280 aaKnown RBP24.58■■□□□ 1.53
TSC22D4-205ENST00000493217 WDR63Q8IWG1 891 aa24.57■■□□□ 1.52
TSC22D4-205ENST00000493217 MED14O60244 1454 aa24.56■■□□□ 1.52
TSC22D4-205ENST00000493217 IPO9Q96P70 1041 aaKnown RBP24.56■■□□□ 1.52
TSC22D4-205ENST00000493217 NOP58Q9Y2X3 529 aaKnown RBP24.56■■□□□ 1.52
TSC22D4-205ENST00000493217 FYB1O15117 783 aa24.55■■□□□ 1.52
TSC22D4-205ENST00000493217 GGNBP2Q9H3C7 697 aa24.55■■□□□ 1.52
TSC22D4-205ENST00000493217 NLRP1Q9C000 1473 aa24.55■■□□□ 1.52
TSC22D4-205ENST00000493217 CDK19Q9BWU1 502 aa24.55■■□□□ 1.52
TSC22D4-205ENST00000493217 RIMS2Q9UQ26 1411 aa24.54■■□□□ 1.52
TSC22D4-205ENST00000493217 U2AF1L5P0DN76 240 aaPredicted RBP24.54■■□□□ 1.52
TSC22D4-205ENST00000493217 U2AF1Q01081 240 aaKnown RBP eCLIP24.54■■□□□ 1.52
TSC22D4-205ENST00000493217 DLC1Q96QB1 1528 aa24.53■■□□□ 1.52
TSC22D4-205ENST00000493217 SKAP1Q86WV1 359 aa24.53■■□□□ 1.52
TSC22D4-205ENST00000493217 PDE3AQ14432 1141 aa24.52■■□□□ 1.52
TSC22D4-205ENST00000493217 ANKRD26Q9UPS8 1709 aa24.52■■□□□ 1.52
TSC22D4-205ENST00000493217 MLECQ14165 292 aa24.52■■□□□ 1.52
TSC22D4-205ENST00000493217 SETD1AO15047 1707 aaKnown RBP24.51■■□□□ 1.51
TSC22D4-205ENST00000493217 ADGRB2O60241 1585 aa24.5■■□□□ 1.51
TSC22D4-205ENST00000493217 HDGFL2Q7Z4V5 671 aaPredicted RBP24.5■■□□□ 1.51
TSC22D4-205ENST00000493217 COL3A1P02461 1466 aaPredicted RBP24.5■■□□□ 1.51
TSC22D4-205ENST00000493217 PAK3O75914 559 aaPredicted RBP24.49■■□□□ 1.51
TSC22D4-205ENST00000493217 CABP1Q9NZU7 370 aa24.49■■□□□ 1.51
TSC22D4-205ENST00000493217 RARSP54136 660 aaKnown RBP24.47■■□□□ 1.51
TSC22D4-205ENST00000493217 WAPLQ7Z5K2 1190 aa24.47■■□□□ 1.51
TSC22D4-205ENST00000493217 PLEKHF1Q96S99 279 aa24.47■■□□□ 1.51
TSC22D4-205ENST00000493217 KIF13AQ9H1H9 1805 aa24.46■■□□□ 1.51
TSC22D4-205ENST00000493217 ZMYM3Q14202 1370 aa24.45■■□□□ 1.5
TSC22D4-205ENST00000493217 PNPLA6Q8IY17 1366 aa24.44■■□□□ 1.5
TSC22D4-205ENST00000493217 NRXN3Q9Y4C0 1643 aa24.43■■□□□ 1.5
TSC22D4-205ENST00000493217 MYH16Q9H6N6 1097 aa24.43■■□□□ 1.5
TSC22D4-205ENST00000493217 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.42■■□□□ 1.5
TSC22D4-205ENST00000493217 ZBTB47Q9UFB7 747 aaPredicted RBP24.42■■□□□ 1.5
TSC22D4-205ENST00000493217 U2SURPO15042 1029 aaKnown RBP24.42■■□□□ 1.5
TSC22D4-205ENST00000493217 ATP7BP35670 1465 aa24.42■■□□□ 1.5
TSC22D4-205ENST00000493217 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
TSC22D4-205ENST00000493217 PANK1Q8TE04 598 aa24.41■■□□□ 1.5
TSC22D4-205ENST00000493217 KIF20BQ96Q89 1820 aa24.4■■□□□ 1.5
TSC22D4-205ENST00000493217 NPM2Q86SE8 214 aaKnown RBP24.4■■□□□ 1.5
TSC22D4-205ENST00000493217 TMPOP42166 694 aaKnown RBP24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms