RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PACS2Q86VP3 889 aa5.05□□□□□ -1.6
SNX13-209ENST00000492626 TOP2AP11388 1531 aaKnown RBP5.05□□□□□ -1.6
SNX13-209ENST00000492626 CDCA7LQ96GN5 454 aa5.05□□□□□ -1.6
SNX13-209ENST00000492626 DNAJB2P25686 324 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 TMCO4Q5TGY1 634 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 POM121Q96HA1 1249 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNX13-209ENST00000492626 ARAP3Q8WWN8 1544 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 ADAMTS12P58397 1594 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 TRAIPQ9BWF2 469 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 GDPD2Q9HCC8 539 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 TTC37Q6PGP7 1564 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 PCDH10Q9P2E7 1040 aa5.04□□□□□ -1.6
SNX13-209ENST00000492626 RCCD1A6NED2 376 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 CSB-PGBD3P0DP91 1061 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 PNMA1Q8ND90 353 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 HELBQ8NG08 1087 aaPredicted RBP5.03□□□□□ -1.6
SNX13-209ENST00000492626 ADCY10Q96PN6 1610 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 GABBR2O75899 941 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 SNRKQ9NRH2 765 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 HRCP23327 699 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 TSC1Q92574 1164 aa5.03□□□□□ -1.6
SNX13-209ENST00000492626 PTPRMP28827 1452 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 USP46P62068 366 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 GRIPAP1Q4V328 841 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 PHOX2BQ99453 314 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 PTPREP23469 700 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 PNMA3Q9UL41 463 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 WASHC4Q2M389 1173 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 SPIRE2Q8WWL2 714 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 PLSCR2Q9NRY7 297 aa5.02□□□□□ -1.61
SNX13-209ENST00000492626 SPTLC1O15269 473 aa5.01□□□□□ -1.61
SNX13-209ENST00000492626 NUDT7P0C024 238 aa5.01□□□□□ -1.61
SNX13-209ENST00000492626 PPP2R2DQ66LE6 453 aa5.01□□□□□ -1.61
SNX13-209ENST00000492626 ZBTB3Q9H5J0 574 aa5.01□□□□□ -1.61
SNX13-209ENST00000492626 LIMD1Q9UGP4 676 aa5.01□□□□□ -1.61
SNX13-209ENST00000492626 NDUFB9Q9Y6M9 179 aa5.01□□□□□ -1.61
SNX13-209ENST00000492626 TUSC1Q2TAM9 212 aa5□□□□□ -1.61
SNX13-209ENST00000492626 ADAM33Q9BZ11 813 aa5□□□□□ -1.61
SNX13-209ENST00000492626 CFAP74Q9C0B2 1584 aa5□□□□□ -1.61
SNX13-209ENST00000492626 LRP5O75197 1615 aa5□□□□□ -1.61
SNX13-209ENST00000492626 RSBN1LQ6PCB5 846 aaPredicted RBP5□□□□□ -1.61
SNX13-209ENST00000492626 KDM4AO75164 1064 aa5□□□□□ -1.61
SNX13-209ENST00000492626 GRIN2AQ12879 1464 aa5□□□□□ -1.61
SNX13-209ENST00000492626 CD46P15529 392 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 GJA5P36382 358 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 FNBP4Q8N3X1 1017 aaPredicted RBP4.99□□□□□ -1.61
SNX13-209ENST00000492626 RETREG2Q8NC44 543 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 ZSWIM6Q9HCJ5 1215 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 MOXD2PA6NHM9 499 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 USP17L8P0C7I0 530 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 FDX1P10109 184 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 NUDT18Q6ZVK8 323 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 ERICH3Q5RHP9 1530 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 PPP1R3GB7ZBB8 358 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 GLMNQ92990 594 aa4.99□□□□□ -1.61
SNX13-209ENST00000492626 FER1L4A9Z1Z3 1794 aa4.98□□□□□ -1.61
SNX13-209ENST00000492626 RFX1P22670 979 aa4.98□□□□□ -1.61
SNX13-209ENST00000492626 POLA1P09884 1462 aaPredicted RBP4.98□□□□□ -1.61
SNX13-209ENST00000492626 ARSIQ5FYB1 569 aa4.98□□□□□ -1.61
SNX13-209ENST00000492626 PRPF38BQ5VTL8 546 aaKnown RBP4.98□□□□□ -1.61
SNX13-209ENST00000492626 GZF1Q9H116 711 aaPredicted RBP4.98□□□□□ -1.61
SNX13-209ENST00000492626 TBC1D2BQ9UPU7 963 aa4.98□□□□□ -1.61
SNX13-209ENST00000492626 MTMR14Q8NCE2 650 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 SNPHO15079 494 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 B4GALNT3Q6L9W6 998 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 PELP1Q8IZL8 1130 aaKnown RBP4.97□□□□□ -1.61
SNX13-209ENST00000492626 TTC13Q8NBP0 860 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 TATDN2Q93075 761 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 PBXIP1Q96AQ6 731 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 SCUBE2Q9NQ36 999 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 EVX2Q03828 476 aa4.97□□□□□ -1.61
SNX13-209ENST00000492626 RUSC2Q8N2Y8 1516 aa4.96□□□□□ -1.61
SNX13-209ENST00000492626 ABCA10Q8WWZ4 1543 aa4.96□□□□□ -1.61
SNX13-209ENST00000492626 BCL2L12Q9HB09 334 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 CPS1P31327 1500 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 C6orf229H3BNL8 230 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 SOX11P35716 441 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 HDGFL1Q5TGJ6 251 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 TMEM134Q9H6X4 195 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 ABCC2Q92887 1545 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 CDK12Q9NYV4 1490 aaPredicted RBP4.96□□□□□ -1.62
SNX13-209ENST00000492626 YEATS2Q9ULM3 1422 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 NDUFV2P19404 249 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 NECTIN2Q92692 538 aa4.96□□□□□ -1.62
SNX13-209ENST00000492626 ARHGEF40Q8TER5 1519 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 TRIM6-TRIM34B2RNG4 842 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 LILRB3O75022 631 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 MAMSTRQ6ZN01 415 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 USTQ9Y2C2 406 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 CUX1P39880 1505 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 KIF21BO75037 1637 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 SEMA3FQ13275 785 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 TSPOAP1O95153 1857 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 POGZQ7Z3K3 1410 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 IFFO2Q5TF58 517 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 CABLES1Q8TDN4 633 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 ZMYM4Q5VZL5 1548 aa4.95□□□□□ -1.62
SNX13-209ENST00000492626 RNF40O75150 1001 aa4.94□□□□□ -1.62
SNX13-209ENST00000492626 QPCTQ16769 361 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms