RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 KCNQ2O43526 872 aa8.69□□□□□ -1.02
SEC13-219ENST00000492602 VPS72Q15906 364 aa8.69□□□□□ -1.02
SEC13-219ENST00000492602 FAM182BQ5T319 152 aa8.69□□□□□ -1.02
SEC13-219ENST00000492602 RRP7BPQ9NSQ0 103 aa8.69□□□□□ -1.02
SEC13-219ENST00000492602 RPRD2Q5VT52 1461 aaKnown RBP8.69□□□□□ -1.02
SEC13-219ENST00000492602 CAMKK2Q96RR4 588 aa8.68□□□□□ -1.02
SEC13-219ENST00000492602 KIF15Q9NS87 1388 aa8.68□□□□□ -1.02
SEC13-219ENST00000492602 ERBINQ96RT1 1412 aa8.68□□□□□ -1.02
SEC13-219ENST00000492602 LAMC1P11047 1609 aa8.67□□□□□ -1.02
SEC13-219ENST00000492602 XPCQ01831 940 aaPredicted RBP8.67□□□□□ -1.02
SEC13-219ENST00000492602 NBPF8Q3BBV2 869 aa8.67□□□□□ -1.02
SEC13-219ENST00000492602 NBPF14Q5TI25 921 aa8.67□□□□□ -1.02
SEC13-219ENST00000492602 LMTK2Q8IWU2 1503 aa8.67□□□□□ -1.02
SEC13-219ENST00000492602 MARF1Q9Y4F3 1742 aaKnown RBP8.67□□□□□ -1.02
SEC13-219ENST00000492602 MYO5BQ9ULV0 1848 aa8.66□□□□□ -1.02
SEC13-219ENST00000492602 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
SEC13-219ENST00000492602 NPHP3Q7Z494 1330 aa8.66□□□□□ -1.02
SEC13-219ENST00000492602 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
SEC13-219ENST00000492602 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
SEC13-219ENST00000492602 GCC2Q8IWJ2 1684 aa8.65□□□□□ -1.02
SEC13-219ENST00000492602 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.02
SEC13-219ENST00000492602 APBA3O96018 575 aa8.65□□□□□ -1.02
SEC13-219ENST00000492602 XRN1Q8IZH2 1706 aaKnown RBP8.64□□□□□ -1.03
SEC13-219ENST00000492602 FOXO3O43524 673 aa8.64□□□□□ -1.03
SEC13-219ENST00000492602 HAP1P54257 671 aaPredicted RBP8.64□□□□□ -1.03
SEC13-219ENST00000492602 ESCO1Q5FWF5 840 aa8.64□□□□□ -1.03
SEC13-219ENST00000492602 NALCNQ8IZF0 1738 aa8.63□□□□□ -1.03
SEC13-219ENST00000492602 METP08581 1390 aa8.63□□□□□ -1.03
SEC13-219ENST00000492602 CAPN15O75808 1086 aa8.63□□□□□ -1.03
SEC13-219ENST00000492602 PLEKHG5O94827 1062 aa8.63□□□□□ -1.03
SEC13-219ENST00000492602 TRIM37O94972 964 aa8.63□□□□□ -1.03
SEC13-219ENST00000492602 PARD3Q8TEW0 1356 aa8.62□□□□□ -1.03
SEC13-219ENST00000492602 PXDNQ92626 1479 aa8.61□□□□□ -1.03
SEC13-219ENST00000492602 TNS1Q9HBL0 1735 aaKnown RBP8.6□□□□□ -1.03
SEC13-219ENST00000492602 MYOM3Q5VTT5 1437 aa8.6□□□□□ -1.03
SEC13-219ENST00000492602 ADGRB2O60241 1585 aa8.6□□□□□ -1.03
SEC13-219ENST00000492602 ADGRL2O95490 1459 aa8.59□□□□□ -1.03
SEC13-219ENST00000492602 FAM196AQ6ZSG2 479 aa8.59□□□□□ -1.03
SEC13-219ENST00000492602 CABLES1Q8TDN4 633 aa8.59□□□□□ -1.03
SEC13-219ENST00000492602 SYT17Q9BSW7 474 aa8.59□□□□□ -1.03
SEC13-219ENST00000492602 LRPPRCP42704 1394 aaKnown RBP8.59□□□□□ -1.03
SEC13-219ENST00000492602 CHD4Q14839 1912 aa8.58□□□□□ -1.04
SEC13-219ENST00000492602 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
SEC13-219ENST00000492602 SPATA31A3Q5VYP0 1347 aa8.58□□□□□ -1.04
SEC13-219ENST00000492602 SLC34A2O95436 690 aa8.58□□□□□ -1.04
SEC13-219ENST00000492602 FHDC1Q9C0D6 1143 aaPredicted RBP8.58□□□□□ -1.04
SEC13-219ENST00000492602 PTPN23Q9H3S7 1636 aa8.58□□□□□ -1.04
SEC13-219ENST00000492602 NRKQ7Z2Y5 1582 aa8.57□□□□□ -1.04
SEC13-219ENST00000492602 FAM83GA6ND36 823 aa8.57□□□□□ -1.04
SEC13-219ENST00000492602 ZBTB7AO95365 584 aa8.57□□□□□ -1.04
SEC13-219ENST00000492602 NRXN3Q9Y4C0 1643 aa8.57□□□□□ -1.04
SEC13-219ENST00000492602 NUTM2FA1L443 756 aa8.56□□□□□ -1.04
SEC13-219ENST00000492602 HSPA6P17066 643 aa8.56□□□□□ -1.04
SEC13-219ENST00000492602 BTG4Q9NY30 223 aa8.56□□□□□ -1.04
SEC13-219ENST00000492602 CHIC2Q9UKJ5 165 aa8.56□□□□□ -1.04
SEC13-219ENST00000492602 PLCH1Q4KWH8 1693 aa8.56□□□□□ -1.04
SEC13-219ENST00000492602 ABCC5O15440 1437 aa8.55□□□□□ -1.04
SEC13-219ENST00000492602 NUP188Q5SRE5 1749 aa8.55□□□□□ -1.04
SEC13-219ENST00000492602 NWD2Q9ULI1 1742 aa8.55□□□□□ -1.04
SEC13-219ENST00000492602 PTGER2P43116 358 aa8.55□□□□□ -1.04
SEC13-219ENST00000492602 GPR162Q16538 588 aa8.55□□□□□ -1.04
SEC13-219ENST00000492602 ZNF326Q5BKZ1 582 aaKnown RBP8.55□□□□□ -1.04
SEC13-219ENST00000492602 ATF5Q9Y2D1 282 aaPredicted RBP8.55□□□□□ -1.04
SEC13-219ENST00000492602 ROBO2Q9HCK4 1378 aa8.55□□□□□ -1.04
SEC13-219ENST00000492602 RREB1Q92766 1687 aa8.55□□□□□ -1.04
SEC13-219ENST00000492602 LMOD2Q6P5Q4 547 aa8.54□□□□□ -1.04
SEC13-219ENST00000492602 KRT28Q7Z3Y7 464 aa8.54□□□□□ -1.04
SEC13-219ENST00000492602 PDGFDQ9GZP0 370 aaPredicted RBP8.54□□□□□ -1.04
SEC13-219ENST00000492602 SPATA31A5Q5VU36 1347 aa8.54□□□□□ -1.04
SEC13-219ENST00000492602 SPATA31A7Q8IWB4 1347 aa8.54□□□□□ -1.04
SEC13-219ENST00000492602 ANKRD30AQ9BXX3 1397 aa8.53□□□□□ -1.04
SEC13-219ENST00000492602 MYOM1P52179 1685 aa8.53□□□□□ -1.04
SEC13-219ENST00000492602 PRELPP51888 382 aa8.52□□□□□ -1.05
SEC13-219ENST00000492602 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
SEC13-219ENST00000492602 ANO8Q9HCE9 1232 aaPredicted RBP8.51□□□□□ -1.05
SEC13-219ENST00000492602 CCDC144AA2RUR9 1427 aa8.51□□□□□ -1.05
SEC13-219ENST00000492602 DAPK1P53355 1430 aa8.51□□□□□ -1.05
SEC13-219ENST00000492602 HFM1A2PYH4 1435 aa8.5□□□□□ -1.05
SEC13-219ENST00000492602 PSME1Q06323 249 aa8.5□□□□□ -1.05
SEC13-219ENST00000492602 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
SEC13-219ENST00000492602 TNS3Q68CZ2 1445 aa8.5□□□□□ -1.05
SEC13-219ENST00000492602 PELP1Q8IZL8 1130 aaKnown RBP8.5□□□□□ -1.05
SEC13-219ENST00000492602 CROCC2H7BZ55 1655 aa8.49□□□□□ -1.05
SEC13-219ENST00000492602 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
SEC13-219ENST00000492602 DLC1Q96QB1 1528 aa8.49□□□□□ -1.05
SEC13-219ENST00000492602 TNS4Q8IZW8 715 aa8.49□□□□□ -1.05
SEC13-219ENST00000492602 BCL11BQ9C0K0 894 aaPredicted RBP8.49□□□□□ -1.05
SEC13-219ENST00000492602 PCDH10Q9P2E7 1040 aa8.49□□□□□ -1.05
SEC13-219ENST00000492602 NRAPQ86VF7 1730 aa8.49□□□□□ -1.05
SEC13-219ENST00000492602 SHANK3Q9BYB0 1731 aa8.49□□□□□ -1.05
SEC13-219ENST00000492602 ARXQ96QS3 562 aa8.48□□□□□ -1.05
SEC13-219ENST00000492602 CASZ1Q86V15 1759 aa8.48□□□□□ -1.05
SEC13-219ENST00000492602 CDC42BPGQ6DT37 1551 aa8.48□□□□□ -1.05
SEC13-219ENST00000492602 MTFR1LQ9H019 292 aa8.47□□□□□ -1.05
SEC13-219ENST00000492602 GPBP1L1Q9HC44 474 aaPredicted RBP8.47□□□□□ -1.05
SEC13-219ENST00000492602 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
SEC13-219ENST00000492602 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
SEC13-219ENST00000492602 ARHGEF10O15013 1369 aa8.47□□□□□ -1.05
SEC13-219ENST00000492602 IQGAP3Q86VI3 1631 aa8.47□□□□□ -1.05
SEC13-219ENST00000492602 ANKRD50Q9ULJ7 1429 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms