RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 ROBO2Q9HCK4 1378 aa12.5□□□□□ -0.41
RP9-204ENST00000492391 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
RP9-204ENST00000492391 ADGRB1O14514 1584 aa12.5□□□□□ -0.41
RP9-204ENST00000492391 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
RP9-204ENST00000492391 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
RP9-204ENST00000492391 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
RP9-204ENST00000492391 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
RP9-204ENST00000492391 L3MBTL2Q969R5 705 aa12.48□□□□□ -0.41
RP9-204ENST00000492391 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
RP9-204ENST00000492391 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
RP9-204ENST00000492391 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
RP9-204ENST00000492391 LAMC1P11047 1609 aa12.46□□□□□ -0.41
RP9-204ENST00000492391 TECPR2O15040 1411 aa12.45□□□□□ -0.42
RP9-204ENST00000492391 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
RP9-204ENST00000492391 PLEKHH1Q9ULM0 1364 aa12.45□□□□□ -0.42
RP9-204ENST00000492391 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
RP9-204ENST00000492391 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
RP9-204ENST00000492391 LRPPRCP42704 1394 aaKnown RBP12.44□□□□□ -0.42
RP9-204ENST00000492391 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
RP9-204ENST00000492391 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
RP9-204ENST00000492391 PTCH1Q13635 1447 aa12.44□□□□□ -0.42
RP9-204ENST00000492391 YTHDC2Q9H6S0 1430 aaKnown RBP12.44□□□□□ -0.42
RP9-204ENST00000492391 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
RP9-204ENST00000492391 NBPF8Q3BBV2 869 aa12.43□□□□□ -0.42
RP9-204ENST00000492391 WAPLQ7Z5K2 1190 aa12.43□□□□□ -0.42
RP9-204ENST00000492391 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
RP9-204ENST00000492391 TRPM1Q7Z4N2 1603 aa12.42□□□□□ -0.42
RP9-204ENST00000492391 STK26Q9P289 416 aa12.42□□□□□ -0.42
RP9-204ENST00000492391 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
RP9-204ENST00000492391 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
RP9-204ENST00000492391 ADGRL3Q9HAR2 1447 aa12.4□□□□□ -0.42
RP9-204ENST00000492391 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
RP9-204ENST00000492391 C19orf44Q9H6X5 657 aa12.4□□□□□ -0.42
RP9-204ENST00000492391 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
RP9-204ENST00000492391 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
RP9-204ENST00000492391 MST1RQ04912 1400 aa12.38□□□□□ -0.43
RP9-204ENST00000492391 DLC1Q96QB1 1528 aa12.38□□□□□ -0.43
RP9-204ENST00000492391 TOM1O60784 492 aa12.38□□□□□ -0.43
RP9-204ENST00000492391 HSPA1LP34931 641 aa12.38□□□□□ -0.43
RP9-204ENST00000492391 SIRT1Q96EB6 747 aa12.38□□□□□ -0.43
RP9-204ENST00000492391 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
RP9-204ENST00000492391 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
RP9-204ENST00000492391 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
RP9-204ENST00000492391 PROM2Q8N271 834 aa12.37□□□□□ -0.43
RP9-204ENST00000492391 MSH6P52701 1360 aa12.37□□□□□ -0.43
RP9-204ENST00000492391 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
RP9-204ENST00000492391 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
RP9-204ENST00000492391 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
RP9-204ENST00000492391 DCCP43146 1447 aa12.36□□□□□ -0.43
RP9-204ENST00000492391 PLCB2Q00722 1185 aa12.35□□□□□ -0.43
RP9-204ENST00000492391 TRAK1Q9UPV9 953 aa12.35□□□□□ -0.43
RP9-204ENST00000492391 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
RP9-204ENST00000492391 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
RP9-204ENST00000492391 PRAM1Q96QH2 718 aa12.34□□□□□ -0.43
RP9-204ENST00000492391 NHSL1Q5SYE7 1610 aa12.33□□□□□ -0.43
RP9-204ENST00000492391 BRINP3Q76B58 766 aa12.33□□□□□ -0.44
RP9-204ENST00000492391 C1orf167Q5SNV9 1468 aa12.33□□□□□ -0.44
RP9-204ENST00000492391 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.44
RP9-204ENST00000492391 ADGRB2O60241 1585 aa12.32□□□□□ -0.44
RP9-204ENST00000492391 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
RP9-204ENST00000492391 SAFB2Q14151 953 aaKnown RBP eCLIP12.32□□□□□ -0.44
RP9-204ENST00000492391 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
RP9-204ENST00000492391 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
RP9-204ENST00000492391 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
RP9-204ENST00000492391 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
RP9-204ENST00000492391 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
RP9-204ENST00000492391 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
RP9-204ENST00000492391 AHDC1Q5TGY3 1603 aaPredicted RBP12.3□□□□□ -0.44
RP9-204ENST00000492391 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
RP9-204ENST00000492391 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
RP9-204ENST00000492391 ATF3P18847 181 aa12.3□□□□□ -0.44
RP9-204ENST00000492391 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
RP9-204ENST00000492391 PRR36Q9H6K5 1346 aa12.3□□□□□ -0.44
RP9-204ENST00000492391 CLSPNQ9HAW4 1339 aa12.3□□□□□ -0.44
RP9-204ENST00000492391 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
RP9-204ENST00000492391 RALGAPBQ86X10 1494 aa12.28□□□□□ -0.44
RP9-204ENST00000492391 HIRIP3Q9BW71 556 aaPredicted RBP12.28□□□□□ -0.44
RP9-204ENST00000492391 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
RP9-204ENST00000492391 TONSLQ96HA7 1378 aa12.28□□□□□ -0.44
RP9-204ENST00000492391 NUTM2FA1L443 756 aa12.27□□□□□ -0.45
RP9-204ENST00000492391 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
RP9-204ENST00000492391 TULP4Q9NRJ4 1543 aa12.26□□□□□ -0.45
RP9-204ENST00000492391 HAX1O00165 279 aa12.25□□□□□ -0.45
RP9-204ENST00000492391 CCER1Q8TC90 406 aaPredicted RBP12.25□□□□□ -0.45
RP9-204ENST00000492391 POGKQ9P215 609 aa12.25□□□□□ -0.45
RP9-204ENST00000492391 TOPAZ1Q8N9V7 1692 aa12.25□□□□□ -0.45
RP9-204ENST00000492391 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
RP9-204ENST00000492391 PXDNQ92626 1479 aa12.24□□□□□ -0.45
RP9-204ENST00000492391 ATP7BP35670 1465 aa12.23□□□□□ -0.45
RP9-204ENST00000492391 ROCK2O75116 1388 aaKnown RBP12.23□□□□□ -0.45
RP9-204ENST00000492391 TRPM3Q9HCF6 1732 aaPredicted RBP12.23□□□□□ -0.45
RP9-204ENST00000492391 SHPRHQ149N8 1683 aa12.22□□□□□ -0.45
RP9-204ENST00000492391 SOS2Q07890 1332 aaPredicted RBP12.22□□□□□ -0.45
RP9-204ENST00000492391 TIMELESSQ9UNS1 1208 aa12.22□□□□□ -0.45
RP9-204ENST00000492391 CENPJQ9HC77 1338 aaPredicted RBP12.21□□□□□ -0.45
RP9-204ENST00000492391 FOXO3O43524 673 aa12.21□□□□□ -0.45
RP9-204ENST00000492391 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.45
RP9-204ENST00000492391 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
RP9-204ENST00000492391 TESK2Q96S53 571 aa12.21□□□□□ -0.45
RP9-204ENST00000492391 CDK19Q9BWU1 502 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms