RNA–Protein interactions for RNA: ENST00000491448.5

GTDC1-218, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-218ENST00000491448 NUP160Q12769 1436 aa5.35□□□□□ -1.55
GTDC1-218ENST00000491448 NEURL4Q96JN8 1562 aa5.35□□□□□ -1.55
GTDC1-218ENST00000491448 ANKRD30AQ9BXX3 1397 aa5.35□□□□□ -1.55
GTDC1-218ENST00000491448 SYNJ2O15056 1496 aa5.34□□□□□ -1.55
GTDC1-218ENST00000491448 ATP10AO60312 1499 aa5.34□□□□□ -1.55
GTDC1-218ENST00000491448 MAGI2Q86UL8 1455 aa5.34□□□□□ -1.55
GTDC1-218ENST00000491448 BLMP54132 1417 aaPredicted RBP5.34□□□□□ -1.55
GTDC1-218ENST00000491448 ZNF662Q6ZS27 426 aa5.34□□□□□ -1.55
GTDC1-218ENST00000491448 MYO5CQ9NQX4 1742 aa5.34□□□□□ -1.55
GTDC1-218ENST00000491448 VIRMAQ69YN4 1812 aaKnown RBP5.34□□□□□ -1.55
GTDC1-218ENST00000491448 WASHC2CQ9Y4E1 1318 aa5.34□□□□□ -1.55
GTDC1-218ENST00000491448 SOX12O15370 315 aa5.34□□□□□ -1.56
GTDC1-218ENST00000491448 PDE3BQ13370 1112 aa5.34□□□□□ -1.56
GTDC1-218ENST00000491448 CCDC184Q52MB2 194 aa5.34□□□□□ -1.56
GTDC1-218ENST00000491448 APBB1IPQ7Z5R6 666 aaPredicted RBP5.34□□□□□ -1.56
GTDC1-218ENST00000491448 RRP7BPQ9NSQ0 103 aa5.34□□□□□ -1.56
GTDC1-218ENST00000491448 ATP1B4Q9UN42 357 aaPredicted RBP5.34□□□□□ -1.56
GTDC1-218ENST00000491448 ZC3H4Q9UPT8 1303 aaKnown RBP5.33□□□□□ -1.56
GTDC1-218ENST00000491448 ZNF608Q9ULD9 1512 aaPredicted RBP5.33□□□□□ -1.56
GTDC1-218ENST00000491448 TPD52L2O43399 206 aaKnown RBP5.33□□□□□ -1.56
GTDC1-218ENST00000491448 PARD3Q8TEW0 1356 aa5.33□□□□□ -1.56
GTDC1-218ENST00000491448 COL17A1Q9UMD9 1497 aaPredicted RBP5.33□□□□□ -1.56
GTDC1-218ENST00000491448 ANKRD50Q9ULJ7 1429 aa5.33□□□□□ -1.56
GTDC1-218ENST00000491448 TESPA1A2RU30 521 aaPredicted RBP5.33□□□□□ -1.56
GTDC1-218ENST00000491448 MS4A1P11836 297 aa5.33□□□□□ -1.56
GTDC1-218ENST00000491448 RALBP1Q15311 655 aa5.33□□□□□ -1.56
GTDC1-218ENST00000491448 PNISRQ8TF01 805 aaKnown RBP5.33□□□□□ -1.56
GTDC1-218ENST00000491448 WDR70Q9NW82 654 aa5.33□□□□□ -1.56
GTDC1-218ENST00000491448 RBM27Q9P2N5 1060 aaKnown RBP5.33□□□□□ -1.56
GTDC1-218ENST00000491448 STK24Q9Y6E0 443 aa5.33□□□□□ -1.56
GTDC1-218ENST00000491448 RPS6KL1Q9Y6S9 549 aa5.33□□□□□ -1.56
GTDC1-218ENST00000491448 ANKRD13AQ8IZ07 590 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 IPO9Q96P70 1041 aaKnown RBP5.32□□□□□ -1.56
GTDC1-218ENST00000491448 TERF2IPQ9NYB0 399 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 IQGAP1P46940 1657 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 KIAA1210Q9ULL0 1709 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 MYBBP1AQ9BQG0 1328 aaKnown RBP5.32□□□□□ -1.56
GTDC1-218ENST00000491448 TRAK2O60296 914 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 HS6ST3Q8IZP7 471 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 MYH16Q9H6N6 1097 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 CDC42BPBQ9Y5S2 1711 aa5.32□□□□□ -1.56
GTDC1-218ENST00000491448 C9orf84Q5VXU9 1444 aa5.31□□□□□ -1.56
GTDC1-218ENST00000491448 CCDC141Q6ZP82 1450 aa5.31□□□□□ -1.56
GTDC1-218ENST00000491448 RIOK3O14730 519 aaKnown RBP5.31□□□□□ -1.56
GTDC1-218ENST00000491448 TCERG1O14776 1098 aaKnown RBP5.31□□□□□ -1.56
GTDC1-218ENST00000491448 PHF14O94880 888 aa5.31□□□□□ -1.56
GTDC1-218ENST00000491448 FAM135AQ9P2D6 1515 aa5.31□□□□□ -1.56
GTDC1-218ENST00000491448 NKX1-1Q15270 411 aaPredicted RBP5.31□□□□□ -1.56
GTDC1-218ENST00000491448 PRAG1Q86YV5 1406 aa5.31□□□□□ -1.56
GTDC1-218ENST00000491448 SAMD9LQ8IVG5 1584 aa5.3□□□□□ -1.56
GTDC1-218ENST00000491448 CANXP27824 592 aaKnown RBP5.3□□□□□ -1.56
GTDC1-218ENST00000491448 ANP32AP39687 249 aaKnown RBP5.3□□□□□ -1.56
GTDC1-218ENST00000491448 ARIH1Q9Y4X5 557 aaPredicted RBP5.3□□□□□ -1.56
GTDC1-218ENST00000491448 CARMIL2Q6F5E8 1435 aa5.3□□□□□ -1.56
GTDC1-218ENST00000491448 SYNMO15061 1565 aa5.3□□□□□ -1.56
GTDC1-218ENST00000491448 ABCC2Q92887 1545 aa5.3□□□□□ -1.56
GTDC1-218ENST00000491448 SPHKAPQ2M3C7 1700 aa5.3□□□□□ -1.56
GTDC1-218ENST00000491448 PRG4Q92954 1404 aaPredicted RBP5.3□□□□□ -1.56
GTDC1-218ENST00000491448 FOXD4Q12950 439 aaPredicted RBP5.3□□□□□ -1.56
GTDC1-218ENST00000491448 B4GALNT3Q6L9W6 998 aa5.3□□□□□ -1.56
GTDC1-218ENST00000491448 KCNV2Q8TDN2 545 aa5.3□□□□□ -1.56
GTDC1-218ENST00000491448 DUOX2Q9NRD8 1548 aa5.29□□□□□ -1.56
GTDC1-218ENST00000491448 ONECUT3O60422 494 aaPredicted RBP5.29□□□□□ -1.56
GTDC1-218ENST00000491448 MICAL1Q8TDZ2 1067 aa5.29□□□□□ -1.56
GTDC1-218ENST00000491448 CEP152O94986 1710 aa5.29□□□□□ -1.56
GTDC1-218ENST00000491448 SHROOM2Q13796 1616 aa5.29□□□□□ -1.56
GTDC1-218ENST00000491448 CCDC144AA2RUR9 1427 aa5.29□□□□□ -1.56
GTDC1-218ENST00000491448 CHIC2Q9UKJ5 165 aa5.29□□□□□ -1.56
GTDC1-218ENST00000491448 ZNF777Q9ULD5 760 aaPredicted RBP5.29□□□□□ -1.56
GTDC1-218ENST00000491448 AMOTL2Q9Y2J4 779 aa5.29□□□□□ -1.56
GTDC1-218ENST00000491448 PEX14O75381 377 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 RRP1P56182 461 aaKnown RBP5.28□□□□□ -1.56
GTDC1-218ENST00000491448 RINLQ6ZS11 566 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 KIAA1522Q9P206 1035 aaPredicted RBP5.28□□□□□ -1.56
GTDC1-218ENST00000491448 DEPDC5O75140 1603 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 MADDQ8WXG6 1647 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 ANKRD62A6NC57 917 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 RAB11FIP3O75154 756 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 PPFIA4O75335 1185 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 MMP14P50281 582 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 TSHZ1Q6ZSZ6 1077 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 NLRP13Q86W25 1043 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 ZNF622Q969S3 477 aaKnown RBP eCLIP5.28□□□□□ -1.567e-6■■□□□ 12.8
GTDC1-218ENST00000491448 SH3BP1Q9Y3L3 701 aa5.28□□□□□ -1.56
GTDC1-218ENST00000491448 MYOM1P52179 1685 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 PLB1Q6P1J6 1458 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 ARAP3Q8WWN8 1544 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 CLGNO14967 610 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 MAP4K4O95819 1239 aaPredicted RBP5.27□□□□□ -1.57
GTDC1-218ENST00000491448 DSG3P32926 999 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 FOSBP53539 338 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 NPC1L1Q9UHC9 1359 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 ERBINQ96RT1 1412 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 ATP10BO94823 1461 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 A2MP01023 1474 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 MYO3AQ8NEV4 1616 aa5.27□□□□□ -1.57
GTDC1-218ENST00000491448 GIMAP6Q6P9H5 292 aa5.26□□□□□ -1.57
GTDC1-218ENST00000491448 KAT6BQ8WYB5 2073 aa5.26□□□□□ -1.57
GTDC1-218ENST00000491448 MYBPC2Q14324 1141 aa5.26□□□□□ -1.57
GTDC1-218ENST00000491448 CFDP1Q9UEE9 299 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms