RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 LRRC7Q96NW7 1537 aa9.67□□□□□ -0.86
SDHB-208ENST00000491274 PIK3R4Q99570 1358 aa9.67□□□□□ -0.86
SDHB-208ENST00000491274 ATF3P18847 181 aa9.67□□□□□ -0.86
SDHB-208ENST00000491274 NKX1-1Q15270 411 aaPredicted RBP9.67□□□□□ -0.86
SDHB-208ENST00000491274 STK26Q9P289 416 aa9.67□□□□□ -0.86
SDHB-208ENST00000491274 KDM5AP29375 1690 aaKnown RBP9.67□□□□□ -0.86
SDHB-208ENST00000491274 ADAMTS13Q76LX8 1427 aa9.66□□□□□ -0.86
SDHB-208ENST00000491274 MSH6P52701 1360 aa9.66□□□□□ -0.86
SDHB-208ENST00000491274 ANKRD30BQ9BXX2 1392 aa9.66□□□□□ -0.86
SDHB-208ENST00000491274 ADGRF5Q8IZF2 1346 aa9.66□□□□□ -0.86
SDHB-208ENST00000491274 DCAF11Q8TEB1 546 aa9.66□□□□□ -0.86
SDHB-208ENST00000491274 C19orf44Q9H6X5 657 aa9.66□□□□□ -0.86
SDHB-208ENST00000491274 METP08581 1390 aa9.65□□□□□ -0.86
SDHB-208ENST00000491274 HSPA1LP34931 641 aa9.65□□□□□ -0.86
SDHB-208ENST00000491274 CADPS2Q86UW7 1296 aa9.65□□□□□ -0.86
SDHB-208ENST00000491274 SLAIN2Q9P270 581 aa9.65□□□□□ -0.86
SDHB-208ENST00000491274 SPHKAPQ2M3C7 1700 aa9.65□□□□□ -0.87
SDHB-208ENST00000491274 CLTCL1P53675 1640 aa9.64□□□□□ -0.87
SDHB-208ENST00000491274 TMEM132EQ6IEE7 984 aa9.64□□□□□ -0.87
SDHB-208ENST00000491274 NEUROD1Q13562 356 aa9.63□□□□□ -0.87
SDHB-208ENST00000491274 SPATA31E1Q6ZUB1 1445 aa9.63□□□□□ -0.87
SDHB-208ENST00000491274 CFAP70Q5T0N1 1121 aa9.62□□□□□ -0.87
SDHB-208ENST00000491274 STAC3Q96MF2 364 aa9.62□□□□□ -0.87
SDHB-208ENST00000491274 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
SDHB-208ENST00000491274 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
SDHB-208ENST00000491274 NKTRP30414 1462 aaKnown RBP9.61□□□□□ -0.87
SDHB-208ENST00000491274 C14orf93Q9H972 538 aaKnown RBP9.61□□□□□ -0.87
SDHB-208ENST00000491274 PTPRUQ92729 1446 aa9.61□□□□□ -0.87
SDHB-208ENST00000491274 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
SDHB-208ENST00000491274 NCOA3Q9Y6Q9 1424 aa9.6□□□□□ -0.87
SDHB-208ENST00000491274 GTPBP6O43824 516 aaPredicted RBP9.6□□□□□ -0.87
SDHB-208ENST00000491274 PLEKHG5O94827 1062 aa9.6□□□□□ -0.87
SDHB-208ENST00000491274 WAPLQ7Z5K2 1190 aa9.59□□□□□ -0.87
SDHB-208ENST00000491274 REM2Q8IYK8 340 aaPredicted RBP9.59□□□□□ -0.87
SDHB-208ENST00000491274 SIN3AQ96ST3 1273 aa9.59□□□□□ -0.87
SDHB-208ENST00000491274 PCGF6Q9BYE7 350 aa9.59□□□□□ -0.87
SDHB-208ENST00000491274 POGKQ9P215 609 aa9.59□□□□□ -0.87
SDHB-208ENST00000491274 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
SDHB-208ENST00000491274 DIP2AQ14689 1571 aa9.58□□□□□ -0.88
SDHB-208ENST00000491274 SETBP1Q9Y6X0 1596 aa9.58□□□□□ -0.88
SDHB-208ENST00000491274 NUBP1P53384 320 aa9.58□□□□□ -0.88
SDHB-208ENST00000491274 FAM135BQ49AJ0 1406 aa9.57□□□□□ -0.88
SDHB-208ENST00000491274 MYO5BQ9ULV0 1848 aa9.57□□□□□ -0.88
SDHB-208ENST00000491274 SAFB2Q14151 953 aaKnown RBP eCLIP9.57□□□□□ -0.88
SDHB-208ENST00000491274 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
SDHB-208ENST00000491274 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
SDHB-208ENST00000491274 KIF1BO60333 1816 aa9.56□□□□□ -0.88
SDHB-208ENST00000491274 LRPPRCP42704 1394 aaKnown RBP9.56□□□□□ -0.88
SDHB-208ENST00000491274 ABCC11Q96J66 1382 aa9.56□□□□□ -0.88
SDHB-208ENST00000491274 DISP3Q9P2K9 1392 aa9.56□□□□□ -0.88
SDHB-208ENST00000491274 NUTM2FA1L443 756 aa9.56□□□□□ -0.88
SDHB-208ENST00000491274 TULP1O00294 542 aaPredicted RBP9.56□□□□□ -0.88
SDHB-208ENST00000491274 ALKQ9UM73 1620 aa9.56□□□□□ -0.88
SDHB-208ENST00000491274 L3MBTL2Q969R5 705 aa9.55□□□□□ -0.88
SDHB-208ENST00000491274 SIRT1Q96EB6 747 aa9.55□□□□□ -0.88
SDHB-208ENST00000491274 PRAM1Q96QH2 718 aa9.55□□□□□ -0.88
SDHB-208ENST00000491274 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
SDHB-208ENST00000491274 STRCP1A6NGW2 1772 aa9.55□□□□□ -0.88
SDHB-208ENST00000491274 NWD1Q149M9 1564 aa9.54□□□□□ -0.88
SDHB-208ENST00000491274 GSE1Q14687 1217 aa9.54□□□□□ -0.88
SDHB-208ENST00000491274 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
SDHB-208ENST00000491274 BRINP3Q76B58 766 aa9.54□□□□□ -0.88
SDHB-208ENST00000491274 RIOK3O14730 519 aaKnown RBP9.53□□□□□ -0.88
SDHB-208ENST00000491274 YTHDC2Q9H6S0 1430 aaKnown RBP9.53□□□□□ -0.88
SDHB-208ENST00000491274 MYOM2P54296 1465 aa9.53□□□□□ -0.88
SDHB-208ENST00000491274 PTCH1Q13635 1447 aa9.52□□□□□ -0.89
SDHB-208ENST00000491274 DCAF8Q5TAQ9 597 aa9.52□□□□□ -0.89
SDHB-208ENST00000491274 ORAI2Q96SN7 254 aa9.52□□□□□ -0.89
SDHB-208ENST00000491274 ADGRL3Q9HAR2 1447 aa9.52□□□□□ -0.89
SDHB-208ENST00000491274 NRXN3Q9Y4C0 1643 aa9.52□□□□□ -0.89
SDHB-208ENST00000491274 DCCP43146 1447 aa9.51□□□□□ -0.89
SDHB-208ENST00000491274 DDX17Q92841 729 aaKnown RBP9.51□□□□□ -0.89
SDHB-208ENST00000491274 HIRIP3Q9BW71 556 aaPredicted RBP9.51□□□□□ -0.89
SDHB-208ENST00000491274 CHD2O14647 1828 aaKnown RBP9.51□□□□□ -0.89
SDHB-208ENST00000491274 MINK1Q8N4C8 1332 aaPredicted RBP9.51□□□□□ -0.89
SDHB-208ENST00000491274 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
SDHB-208ENST00000491274 PITPNM1O00562 1244 aa9.5□□□□□ -0.89
SDHB-208ENST00000491274 NBPF1Q3BBV0 1214 aa9.5□□□□□ -0.89
SDHB-208ENST00000491274 LRRC59Q96AG4 307 aaKnown RBP9.5□□□□□ -0.89
SDHB-208ENST00000491274 TONSLQ96HA7 1378 aa9.5□□□□□ -0.89
SDHB-208ENST00000491274 NRXN1Q9ULB1 1477 aa9.49□□□□□ -0.89
SDHB-208ENST00000491274 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
SDHB-208ENST00000491274 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
SDHB-208ENST00000491274 STK25O00506 426 aa9.49□□□□□ -0.89
SDHB-208ENST00000491274 FOXO3O43524 673 aa9.49□□□□□ -0.89
SDHB-208ENST00000491274 MEX3CQ5U5Q3 659 aaKnown RBP9.49□□□□□ -0.89
SDHB-208ENST00000491274 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
SDHB-208ENST00000491274 GTF3C3Q9Y5Q9 886 aa9.49□□□□□ -0.89
SDHB-208ENST00000491274 JCADQ9P266 1359 aa9.49□□□□□ -0.89
SDHB-208ENST00000491274 TECPR2O15040 1411 aa9.48□□□□□ -0.89
SDHB-208ENST00000491274 MST1RQ04912 1400 aa9.48□□□□□ -0.89
SDHB-208ENST00000491274 C1orf167Q5SNV9 1468 aa9.48□□□□□ -0.89
SDHB-208ENST00000491274 PPLO60437 1756 aa9.48□□□□□ -0.89
SDHB-208ENST00000491274 CCER1Q8TC90 406 aaPredicted RBP9.48□□□□□ -0.89
SDHB-208ENST00000491274 XPCQ01831 940 aaPredicted RBP9.47□□□□□ -0.89
SDHB-208ENST00000491274 PSME1Q06323 249 aa9.47□□□□□ -0.89
SDHB-208ENST00000491274 NPHP3Q7Z494 1330 aa9.47□□□□□ -0.89
SDHB-208ENST00000491274 XRN1Q8IZH2 1706 aaKnown RBP9.47□□□□□ -0.89
SDHB-208ENST00000491274 PRAG1Q86YV5 1406 aa9.47□□□□□ -0.89
SDHB-208ENST00000491274 WASLO00401 505 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms