RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 SLC24A1O60721 1099 aa18.93■□□□□ 0.62
SMPD4-219ENST00000491128 KDM5AP29375 1690 aaKnown RBP18.93■□□□□ 0.62
SMPD4-219ENST00000491128 ABCC11Q96J66 1382 aa18.93■□□□□ 0.62
SMPD4-219ENST00000491128 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
SMPD4-219ENST00000491128 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMPD4-219ENST00000491128 CEP170BQ9Y4F5 1589 aaPredicted RBP18.93■□□□□ 0.62
SMPD4-219ENST00000491128 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
SMPD4-219ENST00000491128 MYOM1P52179 1685 aa18.92■□□□□ 0.62
SMPD4-219ENST00000491128 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
SMPD4-219ENST00000491128 RALBP1Q15311 655 aa18.92■□□□□ 0.62
SMPD4-219ENST00000491128 SETD1AO15047 1707 aaKnown RBP18.92■□□□□ 0.62
SMPD4-219ENST00000491128 MYBBP1AQ9BQG0 1328 aaKnown RBP18.91■□□□□ 0.62
SMPD4-219ENST00000491128 ARHGAP23Q9P227 1491 aa18.91■□□□□ 0.62
SMPD4-219ENST00000491128 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
SMPD4-219ENST00000491128 ANKLE2Q86XL3 938 aa18.9■□□□□ 0.62
SMPD4-219ENST00000491128 CABP1Q9NZU7 370 aa18.9■□□□□ 0.62
SMPD4-219ENST00000491128 PARD3Q8TEW0 1356 aa18.9■□□□□ 0.62
SMPD4-219ENST00000491128 SLIT1O75093 1534 aa18.9■□□□□ 0.62
SMPD4-219ENST00000491128 NSD3Q9BZ95 1437 aa18.88■□□□□ 0.61
SMPD4-219ENST00000491128 HSPA2P54652 639 aa18.87■□□□□ 0.61
SMPD4-219ENST00000491128 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
SMPD4-219ENST00000491128 KDM4FA0A1W2PPD8 638 aa18.86■□□□□ 0.61
SMPD4-219ENST00000491128 KCNA6P17658 529 aa18.86■□□□□ 0.61
SMPD4-219ENST00000491128 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
SMPD4-219ENST00000491128 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
SMPD4-219ENST00000491128 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
SMPD4-219ENST00000491128 MED14O60244 1454 aa18.84■□□□□ 0.61
SMPD4-219ENST00000491128 PPP2R1AP30153 589 aa18.84■□□□□ 0.61
SMPD4-219ENST00000491128 A0A1W2PP64 1363 aa18.83■□□□□ 0.6
SMPD4-219ENST00000491128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMPD4-219ENST00000491128 DLC1Q96QB1 1528 aa18.81■□□□□ 0.6
SMPD4-219ENST00000491128 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
SMPD4-219ENST00000491128 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
SMPD4-219ENST00000491128 GGNBP2Q9H3C7 697 aa18.81■□□□□ 0.6
SMPD4-219ENST00000491128 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
SMPD4-219ENST00000491128 TECPR2O15040 1411 aa18.79■□□□□ 0.6
SMPD4-219ENST00000491128 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
SMPD4-219ENST00000491128 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
SMPD4-219ENST00000491128 PRR36Q9H6K5 1346 aa18.79■□□□□ 0.6
SMPD4-219ENST00000491128 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
SMPD4-219ENST00000491128 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
SMPD4-219ENST00000491128 BRD4O60885 1362 aaPredicted RBP18.79■□□□□ 0.6
SMPD4-219ENST00000491128 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
SMPD4-219ENST00000491128 FAM135BQ49AJ0 1406 aa18.78■□□□□ 0.6
SMPD4-219ENST00000491128 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
SMPD4-219ENST00000491128 FBLN1P23142 703 aa18.77■□□□□ 0.6
SMPD4-219ENST00000491128 SIRT1Q96EB6 747 aa18.77■□□□□ 0.59
SMPD4-219ENST00000491128 TERF2IPQ9NYB0 399 aa18.77■□□□□ 0.59
SMPD4-219ENST00000491128 CD163L1Q9NR16 1453 aa18.76■□□□□ 0.59
SMPD4-219ENST00000491128 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
SMPD4-219ENST00000491128 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-219ENST00000491128 CPS1P31327 1500 aa18.75■□□□□ 0.59
SMPD4-219ENST00000491128 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
SMPD4-219ENST00000491128 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
SMPD4-219ENST00000491128 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-219ENST00000491128 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
SMPD4-219ENST00000491128 CCDC61Q9Y6R9 512 aa18.74■□□□□ 0.59
SMPD4-219ENST00000491128 FYB1O15117 783 aa18.73■□□□□ 0.59
SMPD4-219ENST00000491128 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-219ENST00000491128 ZNF142P52746 1687 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-219ENST00000491128 ADAMTS8Q9UP79 889 aa18.72■□□□□ 0.59
SMPD4-219ENST00000491128 NPC1L1Q9UHC9 1359 aa18.71■□□□□ 0.58
SMPD4-219ENST00000491128 C14orf37Q86TY3 774 aa18.69■□□□□ 0.58
SMPD4-219ENST00000491128 NME9Q86XW9 330 aa18.69■□□□□ 0.58
SMPD4-219ENST00000491128 KNDC1Q76NI1 1749 aa18.69■□□□□ 0.58
SMPD4-219ENST00000491128 MTHFSP49914 203 aa18.69■□□□□ 0.58
SMPD4-219ENST00000491128 NINLQ9Y2I6 1382 aa18.68■□□□□ 0.58
SMPD4-219ENST00000491128 ACEP12821 1306 aa18.67■□□□□ 0.58
SMPD4-219ENST00000491128 ATP7BP35670 1465 aa18.67■□□□□ 0.58
SMPD4-219ENST00000491128 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
SMPD4-219ENST00000491128 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
SMPD4-219ENST00000491128 WDR43Q15061 677 aaKnown RBP eCLIP18.66■□□□□ 0.58
SMPD4-219ENST00000491128 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-219ENST00000491128 DIP2AQ14689 1571 aa18.65■□□□□ 0.58
SMPD4-219ENST00000491128 SOX12O15370 315 aa18.64■□□□□ 0.57
SMPD4-219ENST00000491128 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
SMPD4-219ENST00000491128 PIK3R4Q99570 1358 aa18.62■□□□□ 0.57
SMPD4-219ENST00000491128 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
SMPD4-219ENST00000491128 NGDNQ8NEJ9 315 aaKnown RBP18.62■□□□□ 0.57
SMPD4-219ENST00000491128 XRN1Q8IZH2 1706 aaKnown RBP18.62■□□□□ 0.57
SMPD4-219ENST00000491128 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
SMPD4-219ENST00000491128 NKTRP30414 1462 aaKnown RBP18.61■□□□□ 0.57
SMPD4-219ENST00000491128 PLEKHG5O94827 1062 aa18.6■□□□□ 0.57
SMPD4-219ENST00000491128 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
SMPD4-219ENST00000491128 PLEKHG3A1L390 1219 aa18.58■□□□□ 0.57
SMPD4-219ENST00000491128 RRS1Q15050 365 aaKnown RBP18.58■□□□□ 0.56
SMPD4-219ENST00000491128 ESCO1Q5FWF5 840 aa18.57■□□□□ 0.56
SMPD4-219ENST00000491128 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
SMPD4-219ENST00000491128 CHD2O14647 1828 aaKnown RBP18.57■□□□□ 0.56
SMPD4-219ENST00000491128 XPCQ01831 940 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-219ENST00000491128 ZNF692Q9BU19 519 aaPredicted RBP18.56■□□□□ 0.56
SMPD4-219ENST00000491128 TTC21BQ7Z4L5 1316 aa18.56■□□□□ 0.56
SMPD4-219ENST00000491128 NSD2O96028 1365 aa18.56■□□□□ 0.56
SMPD4-219ENST00000491128 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
SMPD4-219ENST00000491128 LMTK3Q96Q04 1460 aa18.56■□□□□ 0.56
SMPD4-219ENST00000491128 EDC4Q6P2E9 1401 aaKnown RBP18.56■□□□□ 0.56
SMPD4-219ENST00000491128 ORAI2Q96SN7 254 aa18.56■□□□□ 0.56
SMPD4-219ENST00000491128 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
SMPD4-219ENST00000491128 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
SMPD4-219ENST00000491128 SUPT16HQ9Y5B9 1047 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms