RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 SSH1Q8WYL5 1049 aa14.12□□□□□ -0.15
VPS72-205ENST00000491094 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
VPS72-205ENST00000491094 NOB1Q9ULX3 412 aaKnown RBP14.12□□□□□ -0.15
VPS72-205ENST00000491094 NOS1P29475 1434 aa14.12□□□□□ -0.15
VPS72-205ENST00000491094 PREX2Q70Z35 1606 aa14.12□□□□□ -0.15
VPS72-205ENST00000491094 RIPK4P57078 832 aa14.12□□□□□ -0.15
VPS72-205ENST00000491094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
VPS72-205ENST00000491094 EIF2AK4Q9P2K8 1649 aaKnown RBP14.11□□□□□ -0.15
VPS72-205ENST00000491094 C1orf115Q9H7X2 142 aa14.11□□□□□ -0.15
VPS72-205ENST00000491094 TBC1D32Q96NH3 1257 aa14.11□□□□□ -0.15
VPS72-205ENST00000491094 WDR63Q8IWG1 891 aa14.1□□□□□ -0.15
VPS72-205ENST00000491094 TRIM27P14373 513 aa14.1□□□□□ -0.15
VPS72-205ENST00000491094 THUMPD2Q9BTF0 503 aaKnown RBP14.1□□□□□ -0.15
VPS72-205ENST00000491094 MAST1Q9Y2H9 1570 aa14.1□□□□□ -0.15
VPS72-205ENST00000491094 PANK2Q9BZ23 570 aa14.09□□□□□ -0.15
VPS72-205ENST00000491094 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
VPS72-205ENST00000491094 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
VPS72-205ENST00000491094 ERVK-7P63135 1459 aa14.09□□□□□ -0.15
VPS72-205ENST00000491094 HSCBQ8IWL3 235 aa14.08□□□□□ -0.15
VPS72-205ENST00000491094 CFAP65Q6ZU64 1925 aaKnown RBP14.08□□□□□ -0.16
VPS72-205ENST00000491094 GOLGA6L3A6NEY3 463 aa14.08□□□□□ -0.16
VPS72-205ENST00000491094 NPM1P06748 294 aaKnown RBP eCLIP14.08□□□□□ -0.16
VPS72-205ENST00000491094 HMOX1P09601 288 aa14.08□□□□□ -0.16
VPS72-205ENST00000491094 POLR3AO14802 1390 aaPredicted RBP14.07□□□□□ -0.16
VPS72-205ENST00000491094 APBB1O00213 710 aa14.07□□□□□ -0.16
VPS72-205ENST00000491094 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
VPS72-205ENST00000491094 ANKRD45Q5TZF3 282 aa14.07□□□□□ -0.16
VPS72-205ENST00000491094 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
VPS72-205ENST00000491094 EVC2Q86UK5 1308 aa14.07□□□□□ -0.16
VPS72-205ENST00000491094 NPC1L1Q9UHC9 1359 aa14.07□□□□□ -0.16
VPS72-205ENST00000491094 MYO5CQ9NQX4 1742 aa14.07□□□□□ -0.16
VPS72-205ENST00000491094 UNC13BO14795 1591 aa14.06□□□□□ -0.16
VPS72-205ENST00000491094 HSP90AB1P08238 724 aaKnown RBP14.06□□□□□ -0.16
VPS72-205ENST00000491094 IQGAP3Q86VI3 1631 aa14.06□□□□□ -0.16
VPS72-205ENST00000491094 MCM4P33991 863 aa14.06□□□□□ -0.16
VPS72-205ENST00000491094 NAP1L5Q96NT1 182 aaPredicted RBP14.06□□□□□ -0.16
VPS72-205ENST00000491094 ATF7IPQ6VMQ6 1270 aa14.05□□□□□ -0.16
VPS72-205ENST00000491094 C14orf93Q9H972 538 aaKnown RBP14.05□□□□□ -0.16
VPS72-205ENST00000491094 TRAK2O60296 914 aa14.05□□□□□ -0.16
VPS72-205ENST00000491094 RAPGEF3O95398 923 aa14.05□□□□□ -0.16
VPS72-205ENST00000491094 L1TD1Q5T7N2 865 aaKnown RBP14.05□□□□□ -0.16
VPS72-205ENST00000491094 RRAGDQ9NQL2 400 aaPredicted RBP14.04□□□□□ -0.16
VPS72-205ENST00000491094 DDX19BQ9UMR2 479 aa14.04□□□□□ -0.16
VPS72-205ENST00000491094 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
VPS72-205ENST00000491094 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
VPS72-205ENST00000491094 CHMP5Q9NZZ3 219 aa14.03□□□□□ -0.16
VPS72-205ENST00000491094 PTPRTO14522 1441 aa14.03□□□□□ -0.16
VPS72-205ENST00000491094 MADDQ8WXG6 1647 aa14.02□□□□□ -0.16
VPS72-205ENST00000491094 ABCC2Q92887 1545 aa14.02□□□□□ -0.16
VPS72-205ENST00000491094 FANCAO15360 1455 aa14.02□□□□□ -0.17
VPS72-205ENST00000491094 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.17
VPS72-205ENST00000491094 SYNMO15061 1565 aa14.02□□□□□ -0.17
VPS72-205ENST00000491094 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
VPS72-205ENST00000491094 DIAPH1O60610 1272 aaKnown RBP14.01□□□□□ -0.17
VPS72-205ENST00000491094 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
VPS72-205ENST00000491094 VGFO15240 615 aaPredicted RBP14.01□□□□□ -0.17
VPS72-205ENST00000491094 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
VPS72-205ENST00000491094 PRKAR2BP31323 418 aa14.01□□□□□ -0.17
VPS72-205ENST00000491094 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
VPS72-205ENST00000491094 SOX12O15370 315 aa14□□□□□ -0.17
VPS72-205ENST00000491094 IPO8O15397 1037 aaKnown RBP14□□□□□ -0.17
VPS72-205ENST00000491094 CABP1Q9NZU7 370 aa14□□□□□ -0.17
VPS72-205ENST00000491094 NCLP19338 710 aaKnown RBP14□□□□□ -0.17
VPS72-205ENST00000491094 ADGRL1O94910 1474 aa14□□□□□ -0.17
VPS72-205ENST00000491094 NINLQ9Y2I6 1382 aa14□□□□□ -0.17
VPS72-205ENST00000491094 IDI1Q13907 227 aa13.99□□□□□ -0.17
VPS72-205ENST00000491094 FYB1O15117 783 aa13.98□□□□□ -0.17
VPS72-205ENST00000491094 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
VPS72-205ENST00000491094 TRPM2O94759 1503 aa13.98□□□□□ -0.17
VPS72-205ENST00000491094 PLXNC1O60486 1568 aa13.97□□□□□ -0.17
VPS72-205ENST00000491094 LAMC1P11047 1609 aa13.97□□□□□ -0.17
VPS72-205ENST00000491094 TSPYL6Q8N831 410 aa13.97□□□□□ -0.17
VPS72-205ENST00000491094 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
VPS72-205ENST00000491094 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
VPS72-205ENST00000491094 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
VPS72-205ENST00000491094 HDGFL2Q7Z4V5 671 aaPredicted RBP13.96□□□□□ -0.17
VPS72-205ENST00000491094 CHD1LQ86WJ1 897 aa13.96□□□□□ -0.17
VPS72-205ENST00000491094 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
VPS72-205ENST00000491094 CCDC27Q2M243 656 aa13.96□□□□□ -0.17
VPS72-205ENST00000491094 ABCC1P33527 1531 aa13.96□□□□□ -0.17
VPS72-205ENST00000491094 MLECQ14165 292 aa13.96□□□□□ -0.18
VPS72-205ENST00000491094 KDM5AP29375 1690 aaKnown RBP13.96□□□□□ -0.18
VPS72-205ENST00000491094 AAMPQ13685 434 aa13.95□□□□□ -0.18
VPS72-205ENST00000491094 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
VPS72-205ENST00000491094 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
VPS72-205ENST00000491094 PHACTR3Q96KR7 559 aa13.95□□□□□ -0.18
VPS72-205ENST00000491094 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
VPS72-205ENST00000491094 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
VPS72-205ENST00000491094 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
VPS72-205ENST00000491094 RTEL1-TNFRSF6BF6WH68 1400 aa13.94□□□□□ -0.18
VPS72-205ENST00000491094 FOXD4L5Q5VV16 416 aaPredicted RBP13.94□□□□□ -0.18
VPS72-205ENST00000491094 FOXD4L4Q8WXT5 416 aaPredicted RBP13.94□□□□□ -0.18
VPS72-205ENST00000491094 CDK19Q9BWU1 502 aa13.94□□□□□ -0.18
VPS72-205ENST00000491094 FBXO31Q5XUX0 539 aaPredicted RBP13.93□□□□□ -0.18
VPS72-205ENST00000491094 TNPO1Q92973 898 aaKnown RBP13.93□□□□□ -0.18
VPS72-205ENST00000491094 IQGAP1P46940 1657 aa13.93□□□□□ -0.18
VPS72-205ENST00000491094 FAM83GA6ND36 823 aa13.93□□□□□ -0.18
VPS72-205ENST00000491094 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
VPS72-205ENST00000491094 A0A1W2PP64 1363 aa13.93□□□□□ -0.18
VPS72-205ENST00000491094 RNF17Q9BXT8 1623 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms