RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 DCAF11Q8TEB1 546 aa7.92□□□□□ -1.14
CKAP2-207ENST00000490903 LRP6O75581 1613 aa7.92□□□□□ -1.14
CKAP2-207ENST00000490903 C1orf167Q5SNV9 1468 aa7.92□□□□□ -1.14
CKAP2-207ENST00000490903 HIRIP3Q9BW71 556 aaPredicted RBP7.92□□□□□ -1.14
CKAP2-207ENST00000490903 TRAK1Q9UPV9 953 aa7.92□□□□□ -1.14
CKAP2-207ENST00000490903 ASXL1Q8IXJ9 1541 aa7.91□□□□□ -1.14
CKAP2-207ENST00000490903 ANKRD30BQ9BXX2 1392 aa7.91□□□□□ -1.14
CKAP2-207ENST00000490903 PLEKHH1Q9ULM0 1364 aa7.91□□□□□ -1.14
CKAP2-207ENST00000490903 DCCP43146 1447 aa7.91□□□□□ -1.14
CKAP2-207ENST00000490903 COL16A1Q07092 1604 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-207ENST00000490903 PRAM1Q96QH2 718 aa7.91□□□□□ -1.14
CKAP2-207ENST00000490903 USP21Q9UK80 565 aa7.9□□□□□ -1.14
CKAP2-207ENST00000490903 NPHP3Q7Z494 1330 aa7.9□□□□□ -1.14
CKAP2-207ENST00000490903 PMFBP1Q8TBY8 1022 aa7.9□□□□□ -1.14
CKAP2-207ENST00000490903 XRN1Q8IZH2 1706 aaKnown RBP7.89□□□□□ -1.15
CKAP2-207ENST00000490903 PNPLA6Q8IY17 1366 aa7.89□□□□□ -1.15
CKAP2-207ENST00000490903 C14orf93Q9H972 538 aaKnown RBP7.89□□□□□ -1.15
CKAP2-207ENST00000490903 DHX57Q6P158 1386 aaKnown RBP7.89□□□□□ -1.15
CKAP2-207ENST00000490903 MINK1Q8N4C8 1332 aaPredicted RBP7.89□□□□□ -1.15
CKAP2-207ENST00000490903 PSME1Q06323 249 aa7.89□□□□□ -1.15
CKAP2-207ENST00000490903 KRT28Q7Z3Y7 464 aa7.89□□□□□ -1.15
CKAP2-207ENST00000490903 AHDC1Q5TGY3 1603 aaPredicted RBP7.88□□□□□ -1.15
CKAP2-207ENST00000490903 CABLES1Q8TDN4 633 aa7.88□□□□□ -1.15
CKAP2-207ENST00000490903 SPATA31E1Q6ZUB1 1445 aa7.88□□□□□ -1.15
CKAP2-207ENST00000490903 LRPPRCP42704 1394 aaKnown RBP7.88□□□□□ -1.15
CKAP2-207ENST00000490903 SOS2Q07890 1332 aaPredicted RBP7.88□□□□□ -1.15
CKAP2-207ENST00000490903 RBM6P78332 1123 aaKnown RBP7.88□□□□□ -1.15
CKAP2-207ENST00000490903 CCDC9Q9Y3X0 531 aaKnown RBP7.88□□□□□ -1.15
CKAP2-207ENST00000490903 PTCH1Q13635 1447 aa7.88□□□□□ -1.15
CKAP2-207ENST00000490903 UPF1Q92900 1129 aaKnown RBP eCLIP7.88□□□□□ -1.15
CKAP2-207ENST00000490903 PHF8Q9UPP1 1060 aa7.87□□□□□ -1.15
CKAP2-207ENST00000490903 YTHDC2Q9H6S0 1430 aaKnown RBP7.87□□□□□ -1.15
CKAP2-207ENST00000490903 ABCC11Q96J66 1382 aa7.87□□□□□ -1.15
CKAP2-207ENST00000490903 ACIN1Q9UKV3 1341 aaKnown RBP7.87□□□□□ -1.15
CKAP2-207ENST00000490903 NALCNQ8IZF0 1738 aa7.87□□□□□ -1.15
CKAP2-207ENST00000490903 PAK3O75914 559 aaPredicted RBP7.87□□□□□ -1.15
CKAP2-207ENST00000490903 A0A0G2JS52 829 aa7.86□□□□□ -1.15
CKAP2-207ENST00000490903 MYT1Q01538 1121 aa7.86□□□□□ -1.15
CKAP2-207ENST00000490903 PPLO60437 1756 aa7.86□□□□□ -1.15
CKAP2-207ENST00000490903 TRPC5Q9UL62 973 aaPredicted RBP7.86□□□□□ -1.15
CKAP2-207ENST00000490903 SETD1AO15047 1707 aaKnown RBP7.85□□□□□ -1.15
CKAP2-207ENST00000490903 NGDNQ8NEJ9 315 aaKnown RBP7.85□□□□□ -1.15
CKAP2-207ENST00000490903 PIK3C2GO75747 1445 aa7.85□□□□□ -1.15
CKAP2-207ENST00000490903 NEUROD1Q13562 356 aa7.84□□□□□ -1.15
CKAP2-207ENST00000490903 SHPRHQ149N8 1683 aa7.84□□□□□ -1.16
CKAP2-207ENST00000490903 PPP4R3CPQ6ZMV5 832 aa7.83□□□□□ -1.16
CKAP2-207ENST00000490903 HOXD11P31277 338 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-207ENST00000490903 NUTM2GQ5VZR2 741 aa7.83□□□□□ -1.16
CKAP2-207ENST00000490903 SPATA31A3Q5VYP0 1347 aa7.83□□□□□ -1.16
CKAP2-207ENST00000490903 FNBP4Q8N3X1 1017 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-207ENST00000490903 NHSL1Q5SYE7 1610 aa7.82□□□□□ -1.16
CKAP2-207ENST00000490903 MAPK8IP2Q13387 824 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-207ENST00000490903 SIRT1Q96EB6 747 aa7.82□□□□□ -1.16
CKAP2-207ENST00000490903 GJD4Q96KN9 370 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-207ENST00000490903 WASLO00401 505 aaPredicted RBP7.81□□□□□ -1.16
CKAP2-207ENST00000490903 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
CKAP2-207ENST00000490903 SIN3AQ96ST3 1273 aa7.81□□□□□ -1.16
CKAP2-207ENST00000490903 UNC5CLQ8IV45 518 aa7.8□□□□□ -1.16
CKAP2-207ENST00000490903 RGS12O14924 1447 aa7.8□□□□□ -1.16
CKAP2-207ENST00000490903 TECPR2O15040 1411 aa7.8□□□□□ -1.16
CKAP2-207ENST00000490903 GPRASP1Q5JY77 1395 aa7.8□□□□□ -1.16
CKAP2-207ENST00000490903 ZBTB7CA1YPR0 619 aa7.8□□□□□ -1.16
CKAP2-207ENST00000490903 HRCP23327 699 aa7.8□□□□□ -1.16
CKAP2-207ENST00000490903 NUDT16Q96DE0 195 aaKnown RBP7.8□□□□□ -1.16
CKAP2-207ENST00000490903 CDK19Q9BWU1 502 aa7.8□□□□□ -1.16
CKAP2-207ENST00000490903 SRPK2P78362 688 aaKnown RBP7.79□□□□□ -1.16
CKAP2-207ENST00000490903 CDC42BPGQ6DT37 1551 aa7.79□□□□□ -1.16
CKAP2-207ENST00000490903 PRR36Q9H6K5 1346 aa7.79□□□□□ -1.16
CKAP2-207ENST00000490903 FAM83GA6ND36 823 aa7.79□□□□□ -1.16
CKAP2-207ENST00000490903 CNKSR2Q8WXI2 1034 aa7.79□□□□□ -1.16
CKAP2-207ENST00000490903 PXDNQ92626 1479 aa7.79□□□□□ -1.16
CKAP2-207ENST00000490903 ZC3H6P61129 1189 aaKnown RBP7.79□□□□□ -1.16
CKAP2-207ENST00000490903 BTG4Q9NY30 223 aa7.79□□□□□ -1.16
CKAP2-207ENST00000490903 MYOM2P54296 1465 aa7.78□□□□□ -1.16
CKAP2-207ENST00000490903 CHRNA2Q15822 529 aa7.78□□□□□ -1.16
CKAP2-207ENST00000490903 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
CKAP2-207ENST00000490903 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
CKAP2-207ENST00000490903 USP35Q9P2H5 1018 aa7.78□□□□□ -1.16
CKAP2-207ENST00000490903 PRAG1Q86YV5 1406 aa7.78□□□□□ -1.16
CKAP2-207ENST00000490903 STAC3Q96MF2 364 aa7.77□□□□□ -1.16
CKAP2-207ENST00000490903 PRDM11Q9NQV5 511 aa7.77□□□□□ -1.16
CKAP2-207ENST00000490903 ATAD2Q6PL18 1390 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 SF3B2Q13435 895 aaKnown RBP7.77□□□□□ -1.17
CKAP2-207ENST00000490903 FAM98CQ17RN3 349 aaKnown RBP7.77□□□□□ -1.17
CKAP2-207ENST00000490903 FAM182BQ5T319 152 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 L3MBTL2Q969R5 705 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 CABP2Q9NPB3 220 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 SRCAPQ6ZRS2 3230 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 BCL9LQ86UU0 1499 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 IFT172Q9UG01 1749 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 TNS3Q68CZ2 1445 aa7.77□□□□□ -1.17
CKAP2-207ENST00000490903 RGPD8O14715 1765 aaPredicted RBP7.77□□□□□ -1.17
CKAP2-207ENST00000490903 ARHGEF10O15013 1369 aa7.76□□□□□ -1.17
CKAP2-207ENST00000490903 NRXN1Q9ULB1 1477 aa7.76□□□□□ -1.17
CKAP2-207ENST00000490903 ATRNO75882 1429 aa7.76□□□□□ -1.17
CKAP2-207ENST00000490903 EVA1CP58658 441 aa7.76□□□□□ -1.17
CKAP2-207ENST00000490903 DEFB132Q7Z7B7 95 aa7.76□□□□□ -1.17
CKAP2-207ENST00000490903 ABTB2Q8N961 1025 aa7.76□□□□□ -1.17
CKAP2-207ENST00000490903 RNF216Q9NWF9 866 aaPredicted RBP7.76□□□□□ -1.17
CKAP2-207ENST00000490903 CDK12Q9NYV4 1490 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms