RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
BRD9-209ENST00000490814 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
BRD9-209ENST00000490814 E9PSI1 815 aa12.91□□□□□ -0.34
BRD9-209ENST00000490814 L1TD1Q5T7N2 865 aaKnown RBP12.91□□□□□ -0.34
BRD9-209ENST00000490814 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
BRD9-209ENST00000490814 MORC1Q86VD1 984 aa12.9□□□□□ -0.34
BRD9-209ENST00000490814 PREX2Q70Z35 1606 aa12.9□□□□□ -0.34
BRD9-209ENST00000490814 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
BRD9-209ENST00000490814 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
BRD9-209ENST00000490814 TRAK1Q9UPV9 953 aa12.89□□□□□ -0.35
BRD9-209ENST00000490814 ABCC1P33527 1531 aa12.89□□□□□ -0.35
BRD9-209ENST00000490814 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
BRD9-209ENST00000490814 CFAP65Q6ZU64 1925 aaKnown RBP12.88□□□□□ -0.35
BRD9-209ENST00000490814 IPO4Q8TEX9 1081 aaKnown RBP12.88□□□□□ -0.35
BRD9-209ENST00000490814 ATP10AO60312 1499 aa12.88□□□□□ -0.35
BRD9-209ENST00000490814 GLI2P10070 1586 aa12.87□□□□□ -0.35
BRD9-209ENST00000490814 ATP7AQ04656 1500 aa12.87□□□□□ -0.35
BRD9-209ENST00000490814 SAFB2Q14151 953 aaKnown RBP eCLIP12.87□□□□□ -0.35
BRD9-209ENST00000490814 SEC24BO95487 1268 aa12.87□□□□□ -0.35
BRD9-209ENST00000490814 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
BRD9-209ENST00000490814 MAP3K4Q9Y6R4 1608 aa12.87□□□□□ -0.35
BRD9-209ENST00000490814 E9PCH4 1651 aa12.86□□□□□ -0.35
BRD9-209ENST00000490814 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
BRD9-209ENST00000490814 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
BRD9-209ENST00000490814 TNNQ9UQP3 1299 aa12.86□□□□□ -0.35
BRD9-209ENST00000490814 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
BRD9-209ENST00000490814 ARHGEF5Q12774 1597 aa12.86□□□□□ -0.35
BRD9-209ENST00000490814 GOLGA6L3A6NEY3 463 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 IDI1Q13907 227 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 CGNL1Q0VF96 1302 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
BRD9-209ENST00000490814 ZNF521Q96K83 1311 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 TPM2P07951 284 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 CARD14Q9BXL6 1004 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
BRD9-209ENST00000490814 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
BRD9-209ENST00000490814 RBM33Q96EV2 1170 aaKnown RBP12.84□□□□□ -0.35
BRD9-209ENST00000490814 ADGRF5Q8IZF2 1346 aa12.84□□□□□ -0.35
BRD9-209ENST00000490814 TMEM132EQ6IEE7 984 aa12.83□□□□□ -0.35
BRD9-209ENST00000490814 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.35
BRD9-209ENST00000490814 ZMYM3Q14202 1370 aa12.83□□□□□ -0.36
BRD9-209ENST00000490814 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
BRD9-209ENST00000490814 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
BRD9-209ENST00000490814 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
BRD9-209ENST00000490814 STK26Q9P289 416 aa12.83□□□□□ -0.36
BRD9-209ENST00000490814 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.36
BRD9-209ENST00000490814 NCLP19338 710 aaKnown RBP12.82□□□□□ -0.36
BRD9-209ENST00000490814 SCAF11Q99590 1463 aaKnown RBP12.82□□□□□ -0.36
BRD9-209ENST00000490814 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
BRD9-209ENST00000490814 ASXL1Q8IXJ9 1541 aa12.82□□□□□ -0.36
BRD9-209ENST00000490814 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
BRD9-209ENST00000490814 SLC26A8Q96RN1 970 aa12.81□□□□□ -0.36
BRD9-209ENST00000490814 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
BRD9-209ENST00000490814 ZHX1Q9UKY1 873 aaPredicted RBP12.81□□□□□ -0.36
BRD9-209ENST00000490814 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
BRD9-209ENST00000490814 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
BRD9-209ENST00000490814 MTHFSP49914 203 aa12.81□□□□□ -0.36
BRD9-209ENST00000490814 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
BRD9-209ENST00000490814 EIF2AK4Q9P2K8 1649 aaKnown RBP12.8□□□□□ -0.36
BRD9-209ENST00000490814 PDE3AQ14432 1141 aa12.8□□□□□ -0.36
BRD9-209ENST00000490814 INSRP06213 1382 aa12.8□□□□□ -0.36
BRD9-209ENST00000490814 RLBP1P12271 317 aa12.79□□□□□ -0.36
BRD9-209ENST00000490814 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
BRD9-209ENST00000490814 DUOX2Q9NRD8 1548 aa12.79□□□□□ -0.36
BRD9-209ENST00000490814 MFAP1P55081 439 aaKnown RBP12.79□□□□□ -0.36
BRD9-209ENST00000490814 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
BRD9-209ENST00000490814 RTEL1-TNFRSF6BF6WH68 1400 aa12.79□□□□□ -0.36
BRD9-209ENST00000490814 PMFBP1Q8TBY8 1022 aa12.79□□□□□ -0.36
BRD9-209ENST00000490814 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
BRD9-209ENST00000490814 RUNDC1Q96C34 613 aa12.78□□□□□ -0.36
BRD9-209ENST00000490814 PPRC1Q5VV67 1664 aaKnown RBP12.78□□□□□ -0.36
BRD9-209ENST00000490814 PIK3C2GO75747 1445 aa12.78□□□□□ -0.36
BRD9-209ENST00000490814 RARSP54136 660 aaKnown RBP12.78□□□□□ -0.36
BRD9-209ENST00000490814 TRMT2AQ8IZ69 625 aaKnown RBP12.78□□□□□ -0.36
BRD9-209ENST00000490814 TSR2Q969E8 191 aaKnown RBP12.78□□□□□ -0.36
BRD9-209ENST00000490814 C14orf37Q86TY3 774 aa12.77□□□□□ -0.36
BRD9-209ENST00000490814 RWDD1Q9H446 243 aaPredicted RBP12.77□□□□□ -0.36
BRD9-209ENST00000490814 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.36
BRD9-209ENST00000490814 SMAP1Q8IYB5 467 aaPredicted RBP12.77□□□□□ -0.37
BRD9-209ENST00000490814 USP19O94966 1318 aa12.77□□□□□ -0.37
BRD9-209ENST00000490814 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
BRD9-209ENST00000490814 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
BRD9-209ENST00000490814 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
BRD9-209ENST00000490814 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
BRD9-209ENST00000490814 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
BRD9-209ENST00000490814 CFAP74Q9C0B2 1584 aa12.75□□□□□ -0.37
BRD9-209ENST00000490814 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
BRD9-209ENST00000490814 TBC1D2Q9BYX2 928 aa12.75□□□□□ -0.37
BRD9-209ENST00000490814 MYH16Q9H6N6 1097 aa12.75□□□□□ -0.37
BRD9-209ENST00000490814 MCM4P33991 863 aa12.74□□□□□ -0.37
BRD9-209ENST00000490814 DHX37Q8IY37 1157 aaKnown RBP12.74□□□□□ -0.37
BRD9-209ENST00000490814 EID1Q9Y6B2 187 aa12.74□□□□□ -0.37
BRD9-209ENST00000490814 UNC13BO14795 1591 aa12.74□□□□□ -0.37
BRD9-209ENST00000490814 BRD2P25440 801 aaKnown RBP12.74□□□□□ -0.37
BRD9-209ENST00000490814 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
BRD9-209ENST00000490814 TRAK2O60296 914 aa12.74□□□□□ -0.37
BRD9-209ENST00000490814 KIDINS220Q9ULH0 1771 aa12.73□□□□□ -0.37
BRD9-209ENST00000490814 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
BRD9-209ENST00000490814 IQGAP3Q86VI3 1631 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms