RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
ARHGEF39-205ENST00000490638 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
ARHGEF39-205ENST00000490638 SYCP2Q9BX26 1530 aa18.04■□□□□ 0.48
ARHGEF39-205ENST00000490638 ABCC10Q5T3U5 1492 aa18.04■□□□□ 0.48
ARHGEF39-205ENST00000490638 NOS1P29475 1434 aa18.03■□□□□ 0.48
ARHGEF39-205ENST00000490638 PLIN1O60240 522 aa18.03■□□□□ 0.48
ARHGEF39-205ENST00000490638 CADPS2Q86UW7 1296 aa18.03■□□□□ 0.48
ARHGEF39-205ENST00000490638 MCCP23508 829 aa18.02■□□□□ 0.48
ARHGEF39-205ENST00000490638 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
ARHGEF39-205ENST00000490638 GPATCH3Q96I76 525 aa18.02■□□□□ 0.48
ARHGEF39-205ENST00000490638 NBR1Q14596 966 aa18.02■□□□□ 0.47
ARHGEF39-205ENST00000490638 CEP170Q5SW79 1584 aa18.02■□□□□ 0.47
ARHGEF39-205ENST00000490638 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.47
ARHGEF39-205ENST00000490638 C14orf93Q9H972 538 aaKnown RBP18.02■□□□□ 0.47
ARHGEF39-205ENST00000490638 UHRF1BP1LA0JNW5 1464 aa18.01■□□□□ 0.47
ARHGEF39-205ENST00000490638 GOLGA6L22H0YM25 854 aa18.01■□□□□ 0.47
ARHGEF39-205ENST00000490638 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
ARHGEF39-205ENST00000490638 CFAP44Q96MT7 982 aa18.01■□□□□ 0.47
ARHGEF39-205ENST00000490638 AIMP1Q12904 312 aaKnown RBP18.01■□□□□ 0.47
ARHGEF39-205ENST00000490638 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF39-205ENST00000490638 TPRNQ4KMQ1 711 aa18■□□□□ 0.47
ARHGEF39-205ENST00000490638 SMG6Q86US8 1419 aaKnown RBP18■□□□□ 0.47
ARHGEF39-205ENST00000490638 ADAMTS2O95450 1211 aa18■□□□□ 0.47
ARHGEF39-205ENST00000490638 CTTNBP2Q8WZ74 1663 aa18■□□□□ 0.47
ARHGEF39-205ENST00000490638 KCNH5Q8NCM2 988 aa18■□□□□ 0.47
ARHGEF39-205ENST00000490638 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
ARHGEF39-205ENST00000490638 API5Q9BZZ5 524 aaKnown RBP18■□□□□ 0.47
ARHGEF39-205ENST00000490638 COG6Q9Y2V7 657 aa18■□□□□ 0.47
ARHGEF39-205ENST00000490638 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
ARHGEF39-205ENST00000490638 BRD4O60885 1362 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF39-205ENST00000490638 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
ARHGEF39-205ENST00000490638 PTPRKQ15262 1439 aa17.97■□□□□ 0.47
ARHGEF39-205ENST00000490638 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
ARHGEF39-205ENST00000490638 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
ARHGEF39-205ENST00000490638 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.47
ARHGEF39-205ENST00000490638 FAM135AQ9P2D6 1515 aa17.96■□□□□ 0.47
ARHGEF39-205ENST00000490638 SF3B2Q13435 895 aaKnown RBP17.96■□□□□ 0.46
ARHGEF39-205ENST00000490638 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
ARHGEF39-205ENST00000490638 UBAP1LF5GYI3 381 aa17.95■□□□□ 0.46
ARHGEF39-205ENST00000490638 NME9Q86XW9 330 aa17.95■□□□□ 0.46
ARHGEF39-205ENST00000490638 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
ARHGEF39-205ENST00000490638 DUOX2Q9NRD8 1548 aa17.94■□□□□ 0.46
ARHGEF39-205ENST00000490638 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
ARHGEF39-205ENST00000490638 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
ARHGEF39-205ENST00000490638 KRT28Q7Z3Y7 464 aa17.94■□□□□ 0.46
ARHGEF39-205ENST00000490638 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
ARHGEF39-205ENST00000490638 CABP4P57796 275 aa17.93■□□□□ 0.46
ARHGEF39-205ENST00000490638 ZRSR1Q15695 479 aaKnown RBP17.93■□□□□ 0.46
ARHGEF39-205ENST00000490638 DZIP1LQ8IYY4 767 aaKnown RBP17.93■□□□□ 0.46
ARHGEF39-205ENST00000490638 NSD3Q9BZ95 1437 aa17.93■□□□□ 0.46
ARHGEF39-205ENST00000490638 TOM1O60784 492 aa17.92■□□□□ 0.46
ARHGEF39-205ENST00000490638 TARBP1Q13395 1621 aaKnown RBP17.92■□□□□ 0.46
ARHGEF39-205ENST00000490638 KIF16BQ96L93 1317 aa17.91■□□□□ 0.46
ARHGEF39-205ENST00000490638 ANKRD45Q5TZF3 282 aa17.9■□□□□ 0.46
ARHGEF39-205ENST00000490638 DDX19BQ9UMR2 479 aa17.9■□□□□ 0.46
ARHGEF39-205ENST00000490638 FAM177BA6PVY3 158 aa17.89■□□□□ 0.45
ARHGEF39-205ENST00000490638 TULP1O00294 542 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF39-205ENST00000490638 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
ARHGEF39-205ENST00000490638 RPRD2Q5VT52 1461 aaKnown RBP17.89■□□□□ 0.45
ARHGEF39-205ENST00000490638 MSH6P52701 1360 aa17.89■□□□□ 0.45
ARHGEF39-205ENST00000490638 HSCBQ8IWL3 235 aa17.89■□□□□ 0.45
ARHGEF39-205ENST00000490638 WDR97A6NE52 1622 aa17.88■□□□□ 0.45
ARHGEF39-205ENST00000490638 NCKAP5LQ9HCH0 1330 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 ITSN2Q9NZM3 1697 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 HDGFL1Q5TGJ6 251 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 CCDC30Q5VVM6 783 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 EXOC6Q8TAG9 804 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 CRBNQ96SW2 442 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 TOMM22Q9NS69 142 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 RIMS2Q9UQ26 1411 aa17.87■□□□□ 0.45
ARHGEF39-205ENST00000490638 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
ARHGEF39-205ENST00000490638 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
ARHGEF39-205ENST00000490638 ACEP12821 1306 aa17.86■□□□□ 0.45
ARHGEF39-205ENST00000490638 C11orf95C9JLR9 678 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF39-205ENST00000490638 FCHSD2O94868 740 aa17.85■□□□□ 0.45
ARHGEF39-205ENST00000490638 LRPPRCP42704 1394 aaKnown RBP17.85■□□□□ 0.45
ARHGEF39-205ENST00000490638 TWISTNBQ3B726 338 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF39-205ENST00000490638 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.45
ARHGEF39-205ENST00000490638 VPS37DQ86XT2 251 aa17.84■□□□□ 0.45
ARHGEF39-205ENST00000490638 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
ARHGEF39-205ENST00000490638 EMILIN1Q9Y6C2 1016 aa17.84■□□□□ 0.45
ARHGEF39-205ENST00000490638 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
ARHGEF39-205ENST00000490638 ATP10AO60312 1499 aa17.84■□□□□ 0.45
ARHGEF39-205ENST00000490638 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.45
ARHGEF39-205ENST00000490638 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.44
ARHGEF39-205ENST00000490638 MFAP1P55081 439 aaKnown RBP17.83■□□□□ 0.44
ARHGEF39-205ENST00000490638 C19orf44Q9H6X5 657 aa17.83■□□□□ 0.44
ARHGEF39-205ENST00000490638 KCNA6P17658 529 aa17.83■□□□□ 0.44
ARHGEF39-205ENST00000490638 USHBP1Q8N6Y0 703 aa17.82■□□□□ 0.44
ARHGEF39-205ENST00000490638 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
ARHGEF39-205ENST00000490638 NPHP3Q7Z494 1330 aa17.81■□□□□ 0.44
ARHGEF39-205ENST00000490638 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
ARHGEF39-205ENST00000490638 UBTFL1P0CB47 393 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF39-205ENST00000490638 CHRNA2Q15822 529 aa17.81■□□□□ 0.44
ARHGEF39-205ENST00000490638 IFIT2P09913 472 aaKnown RBP17.81■□□□□ 0.44
ARHGEF39-205ENST00000490638 TBX22Q9Y458 520 aa17.8■□□□□ 0.44
ARHGEF39-205ENST00000490638 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
ARHGEF39-205ENST00000490638 KIF6Q6ZMV9 814 aa17.8■□□□□ 0.44
ARHGEF39-205ENST00000490638 CDK11BP21127 795 aaKnown RBP17.8■□□□□ 0.44
ARHGEF39-205ENST00000490638 PPP1R1BQ9UD71 204 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms