RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 AVPP01185 164 aa9.14□□□□□ -0.95
RBM39-235ENST00000490354 Q3C1V9 767 aa9.13□□□□□ -0.95
RBM39-235ENST00000490354 IRF6O14896 467 aa9.12□□□□□ -0.95
RBM39-235ENST00000490354 KDM4AO75164 1064 aa9.12□□□□□ -0.95
RBM39-235ENST00000490354 MMP16P51512 607 aa9.12□□□□□ -0.95
RBM39-235ENST00000490354 MDM2Q00987 491 aaPredicted RBP9.12□□□□□ -0.95
RBM39-235ENST00000490354 HLA-CQ95604 372 aa9.12□□□□□ -0.95
RBM39-235ENST00000490354 TTC24A2A3L6 582 aaPredicted RBP9.11□□□□□ -0.95
RBM39-235ENST00000490354 AXIN1O15169 862 aa9.11□□□□□ -0.95
RBM39-235ENST00000490354 TRIM32Q13049 653 aa9.1□□□□□ -0.95
RBM39-235ENST00000490354 USB1Q9BQ65 265 aaKnown RBP9.1□□□□□ -0.95
RBM39-235ENST00000490354 WNT7AO00755 349 aa9.09□□□□□ -0.95
RBM39-235ENST00000490354 DXOO77932 396 aaKnown RBP9.09□□□□□ -0.95
RBM39-235ENST00000490354 CTC1Q2NKJ3 1217 aa9.09□□□□□ -0.95
RBM39-235ENST00000490354 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
RBM39-235ENST00000490354 MINK1Q8N4C8 1332 aaPredicted RBP9.08□□□□□ -0.96
RBM39-235ENST00000490354 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
RBM39-235ENST00000490354 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
RBM39-235ENST00000490354 HOXA2O43364 376 aa9.07□□□□□ -0.96
RBM39-235ENST00000490354 SMPD1P17405 629 aa9.07□□□□□ -0.96
RBM39-235ENST00000490354 TREML4Q6UXN2 200 aa9.07□□□□□ -0.96
RBM39-235ENST00000490354 CCDC102AQ96A19 550 aa9.07□□□□□ -0.96
RBM39-235ENST00000490354 USP46P62068 366 aa9.06□□□□□ -0.96
RBM39-235ENST00000490354 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
RBM39-235ENST00000490354 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
RBM39-235ENST00000490354 CCDC24Q8N4L8 307 aa9.06□□□□□ -0.96
RBM39-235ENST00000490354 SNIP1Q8TAD8 396 aaKnown RBP9.06□□□□□ -0.96
RBM39-235ENST00000490354 MRGPRX2Q96LB1 330 aa9.06□□□□□ -0.96
RBM39-235ENST00000490354 C11orf95C9JLR9 678 aaPredicted RBP9.04□□□□□ -0.96
RBM39-235ENST00000490354 J3QL48 77 aa9.04□□□□□ -0.96
RBM39-235ENST00000490354 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
RBM39-235ENST00000490354 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
RBM39-235ENST00000490354 FAM217BQ9NTX9 383 aaPredicted RBP9.03□□□□□ -0.96
RBM39-235ENST00000490354 SKOR1P84550 965 aa9.02□□□□□ -0.97
RBM39-235ENST00000490354 CLCN1P35523 988 aa9.01□□□□□ -0.97
RBM39-235ENST00000490354 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
RBM39-235ENST00000490354 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
RBM39-235ENST00000490354 JUNDP17535 347 aa9□□□□□ -0.97
RBM39-235ENST00000490354 HPS1Q92902 700 aa9□□□□□ -0.97
RBM39-235ENST00000490354 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
RBM39-235ENST00000490354 ATP13A2Q9NQ11 1180 aa9□□□□□ -0.97
RBM39-235ENST00000490354 NUTM1Q86Y26 1132 aa8.99□□□□□ -0.97
RBM39-235ENST00000490354 WFS1O76024 890 aa8.98□□□□□ -0.97
RBM39-235ENST00000490354 WNT7BP56706 349 aa8.98□□□□□ -0.97
RBM39-235ENST00000490354 RETREG3Q86VR2 466 aa8.97□□□□□ -0.97
RBM39-235ENST00000490354 KRI1Q8N9T8 703 aaKnown RBP8.97□□□□□ -0.97
RBM39-235ENST00000490354 SNRPBP14678 240 aaKnown RBP8.96□□□□□ -0.98
RBM39-235ENST00000490354 NFX1Q12986 1120 aaKnown RBP8.96□□□□□ -0.98
RBM39-235ENST00000490354 PTCRAQ6ISU1 281 aaPredicted RBP8.96□□□□□ -0.98
RBM39-235ENST00000490354 NUDT12Q9BQG2 462 aa8.96□□□□□ -0.98
RBM39-235ENST00000490354 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.98
RBM39-235ENST00000490354 FDX1P10109 184 aa8.95□□□□□ -0.98
RBM39-235ENST00000490354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
RBM39-235ENST00000490354 ALDH1A1P00352 501 aa8.94□□□□□ -0.98
RBM39-235ENST00000490354 C6orf229H3BNL8 230 aa8.93□□□□□ -0.98
RBM39-235ENST00000490354 TRIM47Q96LD4 638 aa8.93□□□□□ -0.98
RBM39-235ENST00000490354 SENP2Q9HC62 589 aa8.93□□□□□ -0.98
RBM39-235ENST00000490354 SSTR3P32745 418 aaPredicted RBP8.92□□□□□ -0.98
RBM39-235ENST00000490354 SIAH2O43255 324 aa8.91□□□□□ -0.98
RBM39-235ENST00000490354 EHBP1Q8NDI1 1231 aa8.91□□□□□ -0.98
RBM39-235ENST00000490354 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
RBM39-235ENST00000490354 NDUFV2P19404 249 aa8.9□□□□□ -0.98
RBM39-235ENST00000490354 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
RBM39-235ENST00000490354 MOXD2PA6NHM9 499 aa8.89□□□□□ -0.99
RBM39-235ENST00000490354 TERTO14746 1132 aaKnown RBP8.89□□□□□ -0.99
RBM39-235ENST00000490354 CCNYL3P0C7X3 344 aa8.89□□□□□ -0.99
RBM39-235ENST00000490354 MS4A1P11836 297 aa8.89□□□□□ -0.99
RBM39-235ENST00000490354 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
RBM39-235ENST00000490354 SH3BP2P78314 561 aa8.88□□□□□ -0.99
RBM39-235ENST00000490354 WIPF1O43516 503 aa8.87□□□□□ -0.99
RBM39-235ENST00000490354 TTLL12Q14166 644 aaPredicted RBP8.87□□□□□ -0.99
RBM39-235ENST00000490354 PTPRNQ16849 979 aa8.87□□□□□ -0.99
RBM39-235ENST00000490354 BARGINQ6ZT62 677 aa8.87□□□□□ -0.99
RBM39-235ENST00000490354 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
RBM39-235ENST00000490354 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
RBM39-235ENST00000490354 UNC93B1Q9H1C4 597 aa8.86□□□□□ -0.99
RBM39-235ENST00000490354 EVA1BQ9NVM1 165 aa8.86□□□□□ -0.99
RBM39-235ENST00000490354 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
RBM39-235ENST00000490354 ZMYND10O75800 440 aa8.85□□□□□ -0.99
RBM39-235ENST00000490354 BMP1P13497 986 aa8.85□□□□□ -0.99
RBM39-235ENST00000490354 AMHR2Q16671 573 aa8.85□□□□□ -0.99
RBM39-235ENST00000490354 GIGYF2Q6Y7W6 1299 aaKnown RBP8.85□□□□□ -0.99
RBM39-235ENST00000490354 BAP1Q92560 729 aa8.85□□□□□ -0.99
RBM39-235ENST00000490354 CAPN5O15484 640 aaPredicted RBP8.84□□□□□ -0.99
RBM39-235ENST00000490354 KCNH2Q12809 1159 aa8.84□□□□□ -0.99
RBM39-235ENST00000490354 TRIM46Q7Z4K8 759 aa8.84□□□□□ -0.99
RBM39-235ENST00000490354 MTMR2Q13614 643 aa8.83□□□□□ -1
RBM39-235ENST00000490354 INSM1Q01101 510 aaPredicted RBP8.82□□□□□ -1
RBM39-235ENST00000490354 ZC3H15Q8WU90 426 aaKnown RBP8.82□□□□□ -1
RBM39-235ENST00000490354 BEGAINQ9BUH8 593 aa8.82□□□□□ -1
RBM39-235ENST00000490354 TLL2Q9Y6L7 1015 aa8.82□□□□□ -1
RBM39-235ENST00000490354 DESI1Q6ICB0 168 aa8.81□□□□□ -1
RBM39-235ENST00000490354 ZNF511Q8NB15 262 aa8.81□□□□□ -1
RBM39-235ENST00000490354 STK17AQ9UEE5 414 aa8.81□□□□□ -1
RBM39-235ENST00000490354 SPDYE5A6NIY4 337 aa8.8□□□□□ -1
RBM39-235ENST00000490354 TBC1D2Q9BYX2 928 aa8.79□□□□□ -1
RBM39-235ENST00000490354 NXF1Q9UBU9 619 aaKnown RBP8.79□□□□□ -1
RBM39-235ENST00000490354 VARSP26640 1264 aaKnown RBP8.78□□□□□ -1
RBM39-235ENST00000490354 RSBN1LQ6PCB5 846 aaPredicted RBP8.78□□□□□ -1
RBM39-235ENST00000490354 PCDHB15Q9Y5E8 787 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms