RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FBXO31Q5XUX0 539 aaPredicted RBP8.05□□□□□ -1.12
CD46-216ENST00000490278 NUTM2AQ8IVF1 878 aaPredicted RBP8.05□□□□□ -1.12
CD46-216ENST00000490278 ZBTB3Q9H5J0 574 aa8.05□□□□□ -1.12
CD46-216ENST00000490278 WBP1LQ9NX94 342 aa8.05□□□□□ -1.12
CD46-216ENST00000490278 PCDHGC3Q9UN70 934 aa8.05□□□□□ -1.12
CD46-216ENST00000490278 APLP1P51693 650 aa8.04□□□□□ -1.12
CD46-216ENST00000490278 MORN1Q5T089 497 aa8.04□□□□□ -1.12
CD46-216ENST00000490278 CABLES1Q8TDN4 633 aa8.04□□□□□ -1.12
CD46-216ENST00000490278 A0A0G2JS52 829 aa8.03□□□□□ -1.12
CD46-216ENST00000490278 HRCP23327 699 aa8.03□□□□□ -1.12
CD46-216ENST00000490278 MTMR2Q13614 643 aa8.03□□□□□ -1.12
CD46-216ENST00000490278 PUS10Q3MIT2 529 aaKnown RBP8.03□□□□□ -1.12
CD46-216ENST00000490278 TMEM259Q4ZIN3 620 aa8.03□□□□□ -1.12
CD46-216ENST00000490278 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
CD46-216ENST00000490278 NYAP1Q6ZVC0 841 aa8.02□□□□□ -1.13
CD46-216ENST00000490278 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
CD46-216ENST00000490278 PCDHB3Q9Y5E6 796 aa8.02□□□□□ -1.13
CD46-216ENST00000490278 SPDYE5A6NIY4 337 aa8.01□□□□□ -1.13
CD46-216ENST00000490278 C6orf229H3BNL8 230 aa8.01□□□□□ -1.13
CD46-216ENST00000490278 Q3C1V9 767 aa8.01□□□□□ -1.13
CD46-216ENST00000490278 BANK1Q8NDB2 785 aa8.01□□□□□ -1.13
CD46-216ENST00000490278 NR1I2O75469 434 aa7.99□□□□□ -1.13
CD46-216ENST00000490278 MCM6Q14566 821 aa7.99□□□□□ -1.13
CD46-216ENST00000490278 AP1G2O75843 785 aa7.98□□□□□ -1.13
CD46-216ENST00000490278 BLOC1S3Q6QNY0 202 aa7.98□□□□□ -1.13
CD46-216ENST00000490278 SCUBE3Q8IX30 993 aa7.98□□□□□ -1.13
CD46-216ENST00000490278 SYMPKQ92797 1274 aaKnown RBP7.98□□□□□ -1.13
CD46-216ENST00000490278 SALL2Q9Y467 1007 aaPredicted RBP7.98□□□□□ -1.13
CD46-216ENST00000490278 RETREG3Q86VR2 466 aa7.97□□□□□ -1.13
CD46-216ENST00000490278 CFAP99D6REC4 459 aa7.96□□□□□ -1.14
CD46-216ENST00000490278 BRICD5Q6PL45 260 aa7.96□□□□□ -1.14
CD46-216ENST00000490278 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.14
CD46-216ENST00000490278 HELBQ8NG08 1087 aaPredicted RBP7.96□□□□□ -1.14
CD46-216ENST00000490278 FMNL1O95466 1100 aaPredicted RBP7.95□□□□□ -1.14
CD46-216ENST00000490278 UBTFP17480 764 aaKnown RBP7.95□□□□□ -1.14
CD46-216ENST00000490278 COPS2P61201 443 aa7.95□□□□□ -1.14
CD46-216ENST00000490278 PRR7Q8TB68 274 aa7.95□□□□□ -1.14
CD46-216ENST00000490278 TSC1Q92574 1164 aa7.95□□□□□ -1.14
CD46-216ENST00000490278 ZMYND15Q9H091 742 aa7.95□□□□□ -1.14
CD46-216ENST00000490278 SNRKQ9NRH2 765 aa7.95□□□□□ -1.14
CD46-216ENST00000490278 USP17L8P0C7I0 530 aa7.94□□□□□ -1.14
CD46-216ENST00000490278 THAP11Q96EK4 314 aa7.94□□□□□ -1.14
CD46-216ENST00000490278 USB1Q9BQ65 265 aaKnown RBP7.94□□□□□ -1.14
CD46-216ENST00000490278 SOCS7O14512 581 aa7.93□□□□□ -1.14
CD46-216ENST00000490278 CTDSPL2Q05D32 466 aa7.93□□□□□ -1.14
CD46-216ENST00000490278 APBB1O00213 710 aa7.92□□□□□ -1.14
CD46-216ENST00000490278 DESI1Q6ICB0 168 aa7.92□□□□□ -1.14
CD46-216ENST00000490278 MTMR14Q8NCE2 650 aa7.92□□□□□ -1.14
CD46-216ENST00000490278 MTRQ99707 1265 aa7.92□□□□□ -1.14
CD46-216ENST00000490278 SPSB2Q99619 263 aa7.91□□□□□ -1.14
CD46-216ENST00000490278 RAD21O60216 631 aa7.9□□□□□ -1.14
CD46-216ENST00000490278 ZPR1O75312 459 aa7.9□□□□□ -1.14
CD46-216ENST00000490278 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.14
CD46-216ENST00000490278 CLUAP1Q96AJ1 413 aa7.9□□□□□ -1.14
CD46-216ENST00000490278 IL21Q9HBE4 155 aa7.9□□□□□ -1.14
CD46-216ENST00000490278 A6NJR5 290 aa7.89□□□□□ -1.15
CD46-216ENST00000490278 MSS51Q4VC12 460 aa7.89□□□□□ -1.15
CD46-216ENST00000490278 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
CD46-216ENST00000490278 ADH1BP00325 375 aa7.88□□□□□ -1.15
CD46-216ENST00000490278 JUNDP17535 347 aa7.88□□□□□ -1.15
CD46-216ENST00000490278 Q6ZNB5 142 aa7.88□□□□□ -1.15
CD46-216ENST00000490278 LRRN4Q8WUT4 740 aa7.88□□□□□ -1.15
CD46-216ENST00000490278 POM121Q96HA1 1249 aa7.88□□□□□ -1.15
CD46-216ENST00000490278 HMX1Q9NP08 348 aaPredicted RBP7.88□□□□□ -1.15
CD46-216ENST00000490278 COG6Q9Y2V7 657 aa7.88□□□□□ -1.15
CD46-216ENST00000490278 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
CD46-216ENST00000490278 TLL1O43897 1013 aa7.87□□□□□ -1.15
CD46-216ENST00000490278 LYPD8Q6UX82 237 aa7.87□□□□□ -1.15
CD46-216ENST00000490278 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
CD46-216ENST00000490278 ZNF516Q92618 1163 aa7.87□□□□□ -1.15
CD46-216ENST00000490278 GJD4Q96KN9 370 aaPredicted RBP7.87□□□□□ -1.15
CD46-216ENST00000490278 ITGBL1O95965 494 aaPredicted RBP7.86□□□□□ -1.15
CD46-216ENST00000490278 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
CD46-216ENST00000490278 GDPD2Q9HCC8 539 aa7.85□□□□□ -1.15
CD46-216ENST00000490278 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
CD46-216ENST00000490278 DXOO77932 396 aaKnown RBP7.84□□□□□ -1.15
CD46-216ENST00000490278 MMP16P51512 607 aa7.84□□□□□ -1.15
CD46-216ENST00000490278 PTPRNQ16849 979 aa7.84□□□□□ -1.15
CD46-216ENST00000490278 PROSER2Q86WR7 435 aaPredicted RBP7.84□□□□□ -1.15
CD46-216ENST00000490278 PRDM9Q9NQV7 894 aa7.84□□□□□ -1.15
CD46-216ENST00000490278 TBC1D2BQ9UPU7 963 aa7.84□□□□□ -1.15
CD46-216ENST00000490278 NDUFB9Q9Y6M9 179 aa7.84□□□□□ -1.15
CD46-216ENST00000490278 NR6A1Q15406 480 aa7.83□□□□□ -1.16
CD46-216ENST00000490278 SLC6A16Q9GZN6 736 aa7.83□□□□□ -1.16
CD46-216ENST00000490278 TRAK2O60296 914 aa7.82□□□□□ -1.16
CD46-216ENST00000490278 ABL2P42684 1182 aa7.82□□□□□ -1.16
CD46-216ENST00000490278 KCNC4Q03721 635 aa7.82□□□□□ -1.16
CD46-216ENST00000490278 WWC1Q8IX03 1113 aa7.82□□□□□ -1.16
CD46-216ENST00000490278 FNBP4Q8N3X1 1017 aaPredicted RBP7.82□□□□□ -1.16
CD46-216ENST00000490278 NKX2-3Q8TAU0 364 aa7.82□□□□□ -1.16
CD46-216ENST00000490278 EPS8L1Q8TE68 723 aa7.82□□□□□ -1.16
CD46-216ENST00000490278 F12P00748 615 aaPredicted RBP7.81□□□□□ -1.16
CD46-216ENST00000490278 CCNYL3P0C7X3 344 aa7.81□□□□□ -1.16
CD46-216ENST00000490278 NUDT12Q9BQG2 462 aa7.81□□□□□ -1.16
CD46-216ENST00000490278 LCE2BO14633 110 aa7.8□□□□□ -1.16
CD46-216ENST00000490278 CTHP32929 405 aa7.8□□□□□ -1.16
CD46-216ENST00000490278 PNMA1Q8ND90 353 aa7.8□□□□□ -1.16
CD46-216ENST00000490278 EVA1BQ9NVM1 165 aa7.8□□□□□ -1.16
CD46-216ENST00000490278 S1PR4O95977 384 aa7.79□□□□□ -1.16
CD46-216ENST00000490278 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 713.2 ms