RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 CENPJQ9HC77 1338 aaPredicted RBP20.78■□□□□ 0.92
TSC1-206ENST00000490179 ADGRL3Q9HAR2 1447 aa20.77■□□□□ 0.91
TSC1-206ENST00000490179 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.76■□□□□ 0.91
TSC1-206ENST00000490179 USP47Q96K76 1375 aa20.76■□□□□ 0.91
TSC1-206ENST00000490179 QRICH2Q9H0J4 1663 aa20.76■□□□□ 0.91
TSC1-206ENST00000490179 C19orf44Q9H6X5 657 aa20.75■□□□□ 0.91
TSC1-206ENST00000490179 MINK1Q8N4C8 1332 aaPredicted RBP20.74■□□□□ 0.91
TSC1-206ENST00000490179 ATF3P18847 181 aa20.72■□□□□ 0.91
TSC1-206ENST00000490179 ADGRB2O60241 1585 aa20.71■□□□□ 0.91
TSC1-206ENST00000490179 CDC42BPGQ6DT37 1551 aa20.71■□□□□ 0.91
TSC1-206ENST00000490179 DCCP43146 1447 aa20.7■□□□□ 0.9
TSC1-206ENST00000490179 EIF4G2P78344 907 aaKnown RBP eCLIP20.7■□□□□ 0.9
TSC1-206ENST00000490179 HIRIP3Q9BW71 556 aaPredicted RBP20.7■□□□□ 0.9
TSC1-206ENST00000490179 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
TSC1-206ENST00000490179 CADPS2Q86UW7 1296 aa20.69■□□□□ 0.9
TSC1-206ENST00000490179 TOM1O60784 492 aa20.66■□□□□ 0.9
TSC1-206ENST00000490179 HSPA5P11021 654 aaKnown RBP20.66■□□□□ 0.9
TSC1-206ENST00000490179 SBNO2Q9Y2G9 1366 aa20.66■□□□□ 0.9
TSC1-206ENST00000490179 FMN2Q9NZ56 1722 aa20.65■□□□□ 0.9
TSC1-206ENST00000490179 UBAP1LF5GYI3 381 aa20.65■□□□□ 0.9
TSC1-206ENST00000490179 WASLO00401 505 aaPredicted RBP20.65■□□□□ 0.9
TSC1-206ENST00000490179 SLC24A1O60721 1099 aa20.64■□□□□ 0.89
TSC1-206ENST00000490179 EVC2Q86UK5 1308 aa20.63■□□□□ 0.89
TSC1-206ENST00000490179 TESK2Q96S53 571 aa20.62■□□□□ 0.89
TSC1-206ENST00000490179 CDK19Q9BWU1 502 aa20.62■□□□□ 0.89
TSC1-206ENST00000490179 TULP4Q9NRJ4 1543 aa20.62■□□□□ 0.89
TSC1-206ENST00000490179 MST1RQ04912 1400 aa20.61■□□□□ 0.89
TSC1-206ENST00000490179 NUTM2FA1L443 756 aa20.61■□□□□ 0.89
TSC1-206ENST00000490179 SLAIN2Q9P270 581 aa20.61■□□□□ 0.89
TSC1-206ENST00000490179 SRPK2P78362 688 aaKnown RBP20.6■□□□□ 0.89
TSC1-206ENST00000490179 TMF1P82094 1093 aa20.59■□□□□ 0.89
TSC1-206ENST00000490179 ANKARQ7Z5J8 1434 aa20.59■□□□□ 0.89
TSC1-206ENST00000490179 C1orf167Q5SNV9 1468 aa20.58■□□□□ 0.89
TSC1-206ENST00000490179 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
TSC1-206ENST00000490179 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
TSC1-206ENST00000490179 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
TSC1-206ENST00000490179 RGPD8O14715 1765 aaPredicted RBP20.57■□□□□ 0.88
TSC1-206ENST00000490179 USP32Q8NFA0 1604 aa20.56■□□□□ 0.88
TSC1-206ENST00000490179 ESCO1Q5FWF5 840 aa20.55■□□□□ 0.88
TSC1-206ENST00000490179 NUDT16Q96DE0 195 aaKnown RBP20.55■□□□□ 0.88
TSC1-206ENST00000490179 ITSN1Q15811 1721 aa20.55■□□□□ 0.88
TSC1-206ENST00000490179 CDCA8Q53HL2 280 aa20.54■□□□□ 0.88
TSC1-206ENST00000490179 DISP3Q9P2K9 1392 aa20.54■□□□□ 0.88
TSC1-206ENST00000490179 ATP7BP35670 1465 aa20.54■□□□□ 0.88
TSC1-206ENST00000490179 ROBO1Q9Y6N7 1651 aa20.54■□□□□ 0.88
TSC1-206ENST00000490179 PRR36Q9H6K5 1346 aa20.53■□□□□ 0.88
TSC1-206ENST00000490179 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
TSC1-206ENST00000490179 KIF1AQ12756 1690 aa20.51■□□□□ 0.87
TSC1-206ENST00000490179 ATAD2Q6PL18 1390 aa20.51■□□□□ 0.87
TSC1-206ENST00000490179 BRINP3Q76B58 766 aa20.51■□□□□ 0.87
TSC1-206ENST00000490179 PUS7Q96PZ0 661 aaKnown RBP20.51■□□□□ 0.87
TSC1-206ENST00000490179 CCDC61Q9Y6R9 512 aa20.51■□□□□ 0.87
TSC1-206ENST00000490179 TOPAZ1Q8N9V7 1692 aa20.51■□□□□ 0.87
TSC1-206ENST00000490179 PHF8Q9UPP1 1060 aa20.5■□□□□ 0.87
TSC1-206ENST00000490179 FBXO41Q8TF61 875 aa20.49■□□□□ 0.87
TSC1-206ENST00000490179 PPIP5K1Q6PFW1 1433 aa20.48■□□□□ 0.87
TSC1-206ENST00000490179 PMFBP1Q8TBY8 1022 aa20.47■□□□□ 0.87
TSC1-206ENST00000490179 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
TSC1-206ENST00000490179 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
TSC1-206ENST00000490179 TMC1Q8TDI8 760 aa20.45■□□□□ 0.86
TSC1-206ENST00000490179 CABP1Q9NZU7 370 aa20.45■□□□□ 0.86
TSC1-206ENST00000490179 NHSL1Q5SYE7 1610 aa20.45■□□□□ 0.86
TSC1-206ENST00000490179 PLEKHG3A1L390 1219 aa20.44■□□□□ 0.86
TSC1-206ENST00000490179 FOXO3O43524 673 aa20.43■□□□□ 0.86
TSC1-206ENST00000490179 NPHP3Q7Z494 1330 aa20.43■□□□□ 0.86
TSC1-206ENST00000490179 NINLQ9Y2I6 1382 aa20.43■□□□□ 0.86
TSC1-206ENST00000490179 AHDC1Q5TGY3 1603 aaPredicted RBP20.42■□□□□ 0.86
TSC1-206ENST00000490179 C11orf95C9JLR9 678 aaPredicted RBP20.42■□□□□ 0.86
TSC1-206ENST00000490179 ACEP12821 1306 aa20.42■□□□□ 0.86
TSC1-206ENST00000490179 PHLPP1O60346 1717 aa20.41■□□□□ 0.86
TSC1-206ENST00000490179 DDX17Q92841 729 aaKnown RBP20.41■□□□□ 0.86
TSC1-206ENST00000490179 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
TSC1-206ENST00000490179 PSME1Q06323 249 aa20.4■□□□□ 0.86
TSC1-206ENST00000490179 KIF7Q2M1P5 1343 aa20.4■□□□□ 0.86
TSC1-206ENST00000490179 SLC12A5Q9H2X9 1139 aa20.4■□□□□ 0.86
TSC1-206ENST00000490179 MYOM1P52179 1685 aa20.39■□□□□ 0.86
TSC1-206ENST00000490179 CCDC7Q96M83 1385 aa20.38■□□□□ 0.85
TSC1-206ENST00000490179 KRT28Q7Z3Y7 464 aa20.38■□□□□ 0.85
TSC1-206ENST00000490179 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
TSC1-206ENST00000490179 TERF2IPQ9NYB0 399 aa20.38■□□□□ 0.85
TSC1-206ENST00000490179 AKAP12Q02952 1782 aa20.37■□□□□ 0.85
TSC1-206ENST00000490179 XPCQ01831 940 aaPredicted RBP20.37■□□□□ 0.85
TSC1-206ENST00000490179 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
TSC1-206ENST00000490179 PXDNQ92626 1479 aa20.36■□□□□ 0.85
TSC1-206ENST00000490179 COL16A1Q07092 1604 aaPredicted RBP20.35■□□□□ 0.85
TSC1-206ENST00000490179 SOS2Q07890 1332 aaPredicted RBP20.35■□□□□ 0.85
TSC1-206ENST00000490179 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
TSC1-206ENST00000490179 HSPA1LP34931 641 aa20.35■□□□□ 0.85
TSC1-206ENST00000490179 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
TSC1-206ENST00000490179 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
TSC1-206ENST00000490179 CPSF1Q10570 1443 aaKnown RBP20.34■□□□□ 0.85
TSC1-206ENST00000490179 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
TSC1-206ENST00000490179 MON2Q7Z3U7 1717 aa20.33■□□□□ 0.85
TSC1-206ENST00000490179 USP6P35125 1406 aa20.33■□□□□ 0.84
TSC1-206ENST00000490179 A0A1W2PP64 1363 aa20.33■□□□□ 0.84
TSC1-206ENST00000490179 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
TSC1-206ENST00000490179 LRRC59Q96AG4 307 aaKnown RBP20.32■□□□□ 0.84
TSC1-206ENST00000490179 TRPM3Q9HCF6 1732 aaPredicted RBP20.32■□□□□ 0.84
TSC1-206ENST00000490179 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
TSC1-206ENST00000490179 SBNO1A3KN83 1393 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms