RNA–Protein interactions for RNA: ENST00000490104.5

TSN-208, Transcript of translin, humanhuman

TSL 2

Gene TSN, Length 2,717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-208ENST00000490104 ABCC11Q96J66 1382 aa19.13■□□□□ 0.65
TSN-208ENST00000490104 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
TSN-208ENST00000490104 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
TSN-208ENST00000490104 PRKRIP1Q9H875 184 aaPredicted RBP19.12■□□□□ 0.65
TSN-208ENST00000490104 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
TSN-208ENST00000490104 NPHP4O75161 1426 aaPredicted RBP19.1■□□□□ 0.65
TSN-208ENST00000490104 MED14O60244 1454 aa19.09■□□□□ 0.65
TSN-208ENST00000490104 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
TSN-208ENST00000490104 SBNO2Q9Y2G9 1366 aa19.08■□□□□ 0.65
TSN-208ENST00000490104 CARD14Q9BXL6 1004 aa19.08■□□□□ 0.65
TSN-208ENST00000490104 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
TSN-208ENST00000490104 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
TSN-208ENST00000490104 MYOM1P52179 1685 aa19.07■□□□□ 0.64
TSN-208ENST00000490104 C14orf37Q86TY3 774 aa19.06■□□□□ 0.64
TSN-208ENST00000490104 LMTK3Q96Q04 1460 aa19.06■□□□□ 0.64
TSN-208ENST00000490104 TNNT2P45379 298 aaPredicted RBP19.06■□□□□ 0.64
TSN-208ENST00000490104 WASLO00401 505 aaPredicted RBP19.05■□□□□ 0.64
TSN-208ENST00000490104 MRS2Q9HD23 443 aa19.02■□□□□ 0.63
TSN-208ENST00000490104 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.01■□□□□ 0.63
TSN-208ENST00000490104 DLC1Q96QB1 1528 aa19.01■□□□□ 0.63
TSN-208ENST00000490104 TECPR2O15040 1411 aa19.01■□□□□ 0.63
TSN-208ENST00000490104 CPS1P31327 1500 aa19.01■□□□□ 0.63
TSN-208ENST00000490104 NUDT16Q96DE0 195 aaKnown RBP19.01■□□□□ 0.63
TSN-208ENST00000490104 PRR36Q9H6K5 1346 aa19■□□□□ 0.63
TSN-208ENST00000490104 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
TSN-208ENST00000490104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
TSN-208ENST00000490104 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
TSN-208ENST00000490104 PMFBP1Q8TBY8 1022 aa19■□□□□ 0.63
TSN-208ENST00000490104 SLC24A1O60721 1099 aa18.99■□□□□ 0.63
TSN-208ENST00000490104 FAM135BQ49AJ0 1406 aa18.99■□□□□ 0.63
TSN-208ENST00000490104 A0A1W2PP64 1363 aa18.98■□□□□ 0.63
TSN-208ENST00000490104 KTN1Q86UP2 1357 aaKnown RBP18.98■□□□□ 0.63
TSN-208ENST00000490104 AMER1Q5JTC6 1135 aaPredicted RBP18.98■□□□□ 0.63
TSN-208ENST00000490104 PROSER2Q86WR7 435 aaPredicted RBP18.97■□□□□ 0.63
TSN-208ENST00000490104 KNDC1Q76NI1 1749 aa18.97■□□□□ 0.63
TSN-208ENST00000490104 DIP2AQ14689 1571 aa18.96■□□□□ 0.63
TSN-208ENST00000490104 PPIP5K1Q6PFW1 1433 aa18.96■□□□□ 0.63
TSN-208ENST00000490104 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
TSN-208ENST00000490104 GGNBP2Q9H3C7 697 aa18.95■□□□□ 0.62
TSN-208ENST00000490104 ATAD2Q6PL18 1390 aa18.95■□□□□ 0.62
TSN-208ENST00000490104 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
TSN-208ENST00000490104 ZNF335Q9H4Z2 1342 aaPredicted RBP18.94■□□□□ 0.62
TSN-208ENST00000490104 FBLN1P23142 703 aa18.94■□□□□ 0.62
TSN-208ENST00000490104 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
TSN-208ENST00000490104 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
TSN-208ENST00000490104 SIRT1Q96EB6 747 aa18.93■□□□□ 0.62
TSN-208ENST00000490104 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
TSN-208ENST00000490104 CCER2I3L3R5 266 aa18.92■□□□□ 0.62
TSN-208ENST00000490104 ZRANB1Q9UGI0 708 aa18.92■□□□□ 0.62
TSN-208ENST00000490104 ANKRD36BQ8N2N9 1353 aa18.91■□□□□ 0.62
TSN-208ENST00000490104 TERF2IPQ9NYB0 399 aa18.91■□□□□ 0.62
TSN-208ENST00000490104 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
TSN-208ENST00000490104 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
TSN-208ENST00000490104 HDGFL2Q7Z4V5 671 aaPredicted RBP18.9■□□□□ 0.62
TSN-208ENST00000490104 STRCQ7RTU9 1775 aa18.9■□□□□ 0.62
TSN-208ENST00000490104 ATP7BP35670 1465 aa18.9■□□□□ 0.62
TSN-208ENST00000490104 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
TSN-208ENST00000490104 SOX12O15370 315 aa18.89■□□□□ 0.61
TSN-208ENST00000490104 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
TSN-208ENST00000490104 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
TSN-208ENST00000490104 XPCQ01831 940 aaPredicted RBP18.88■□□□□ 0.61
TSN-208ENST00000490104 RALBP1Q15311 655 aa18.88■□□□□ 0.61
TSN-208ENST00000490104 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
TSN-208ENST00000490104 ACEP12821 1306 aa18.88■□□□□ 0.61
TSN-208ENST00000490104 NME9Q86XW9 330 aa18.87■□□□□ 0.61
TSN-208ENST00000490104 NGDNQ8NEJ9 315 aaKnown RBP18.87■□□□□ 0.61
TSN-208ENST00000490104 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
TSN-208ENST00000490104 NALCNQ8IZF0 1738 aa18.87■□□□□ 0.61
TSN-208ENST00000490104 CGNL1Q0VF96 1302 aa18.86■□□□□ 0.61
TSN-208ENST00000490104 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
TSN-208ENST00000490104 PPP2R1AP30153 589 aa18.86■□□□□ 0.61
TSN-208ENST00000490104 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
TSN-208ENST00000490104 NUTM2GQ5VZR2 741 aa18.86■□□□□ 0.61
TSN-208ENST00000490104 NKTRP30414 1462 aaKnown RBP18.85■□□□□ 0.61
TSN-208ENST00000490104 ORAI2Q96SN7 254 aa18.85■□□□□ 0.61
TSN-208ENST00000490104 FYB1O15117 783 aa18.85■□□□□ 0.61
TSN-208ENST00000490104 PUS7Q96PZ0 661 aaKnown RBP18.84■□□□□ 0.61
TSN-208ENST00000490104 DDX17Q92841 729 aaKnown RBP18.83■□□□□ 0.61
TSN-208ENST00000490104 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.6
TSN-208ENST00000490104 NLRP13Q86W25 1043 aa18.83■□□□□ 0.6
TSN-208ENST00000490104 USP32Q8NFA0 1604 aa18.83■□□□□ 0.6
TSN-208ENST00000490104 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
TSN-208ENST00000490104 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
TSN-208ENST00000490104 SALL2Q9Y467 1007 aaPredicted RBP18.82■□□□□ 0.6
TSN-208ENST00000490104 ADGRL3Q9HAR2 1447 aa18.81■□□□□ 0.6
TSN-208ENST00000490104 ADGRB2O60241 1585 aa18.81■□□□□ 0.6
TSN-208ENST00000490104 FOXO3O43524 673 aa18.8■□□□□ 0.6
TSN-208ENST00000490104 NINLQ9Y2I6 1382 aa18.79■□□□□ 0.6
TSN-208ENST00000490104 LMOD2Q6P5Q4 547 aa18.78■□□□□ 0.6
TSN-208ENST00000490104 CPSF1Q10570 1443 aaKnown RBP18.78■□□□□ 0.6
TSN-208ENST00000490104 ATF3P18847 181 aa18.77■□□□□ 0.6
TSN-208ENST00000490104 PNISRQ8TF01 805 aaKnown RBP18.77■□□□□ 0.6
TSN-208ENST00000490104 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.6
TSN-208ENST00000490104 PHF8Q9UPP1 1060 aa18.77■□□□□ 0.6
TSN-208ENST00000490104 MTHFSP49914 203 aa18.77■□□□□ 0.59
TSN-208ENST00000490104 NWD1Q149M9 1564 aa18.76■□□□□ 0.59
TSN-208ENST00000490104 CDC42BPGQ6DT37 1551 aa18.76■□□□□ 0.59
TSN-208ENST00000490104 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
TSN-208ENST00000490104 RRS1Q15050 365 aaKnown RBP18.75■□□□□ 0.59
TSN-208ENST00000490104 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms