RNA–Protein interactions for RNA: ENST00000489914.1

PCGF1-206, Transcript of polycomb group ring finger 1, humanhuman

TSL 1 (best)

Gene PCGF1, Length 433 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1-206ENST00000489914 PIK3C2BO00750 1634 aa10.47□□□□□ -0.73
PCGF1-206ENST00000489914 PDE3BQ13370 1112 aa10.46□□□□□ -0.73
PCGF1-206ENST00000489914 RSPH4AQ5TD94 716 aa10.46□□□□□ -0.73
PCGF1-206ENST00000489914 C8orf37Q96NL8 207 aa10.46□□□□□ -0.73
PCGF1-206ENST00000489914 PRDM15P57071 1507 aaPredicted RBP10.46□□□□□ -0.74
PCGF1-206ENST00000489914 KTN1Q86UP2 1357 aaKnown RBP10.45□□□□□ -0.74
PCGF1-206ENST00000489914 DSG3P32926 999 aa10.45□□□□□ -0.74
PCGF1-206ENST00000489914 FAM9BQ8IZU0 186 aa10.45□□□□□ -0.74
PCGF1-206ENST00000489914 SETBP1Q9Y6X0 1596 aa10.44□□□□□ -0.74
PCGF1-206ENST00000489914 CDK12Q9NYV4 1490 aaPredicted RBP10.44□□□□□ -0.74
PCGF1-206ENST00000489914 RGS12O14924 1447 aa10.44□□□□□ -0.74
PCGF1-206ENST00000489914 IDI1Q13907 227 aa10.44□□□□□ -0.74
PCGF1-206ENST00000489914 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
PCGF1-206ENST00000489914 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
PCGF1-206ENST00000489914 SHPRHQ149N8 1683 aa10.44□□□□□ -0.74
PCGF1-206ENST00000489914 HFM1A2PYH4 1435 aa10.43□□□□□ -0.74
PCGF1-206ENST00000489914 FGD6Q6ZV73 1430 aa10.43□□□□□ -0.74
PCGF1-206ENST00000489914 CCDC7Q96M83 1385 aa10.43□□□□□ -0.74
PCGF1-206ENST00000489914 RBM6P78332 1123 aaKnown RBP10.43□□□□□ -0.74
PCGF1-206ENST00000489914 CHRDL2Q6WN34 429 aa10.43□□□□□ -0.74
PCGF1-206ENST00000489914 TET3O43151 1660 aa10.42□□□□□ -0.74
PCGF1-206ENST00000489914 KDM5AP29375 1690 aaKnown RBP10.42□□□□□ -0.74
PCGF1-206ENST00000489914 TPM2P07951 284 aa10.42□□□□□ -0.74
PCGF1-206ENST00000489914 HSPA5P11021 654 aaKnown RBP10.42□□□□□ -0.74
PCGF1-206ENST00000489914 ATF3P18847 181 aa10.42□□□□□ -0.74
PCGF1-206ENST00000489914 CLCN1P35523 988 aa10.42□□□□□ -0.74
PCGF1-206ENST00000489914 ISY1Q9ULR0 285 aaKnown RBP10.42□□□□□ -0.74
PCGF1-206ENST00000489914 MROH1Q8NDA8 1641 aa10.42□□□□□ -0.74
PCGF1-206ENST00000489914 EFCAB6Q5THR3 1501 aa10.41□□□□□ -0.74
PCGF1-206ENST00000489914 EHBP1L1Q8N3D4 1523 aa10.41□□□□□ -0.74
PCGF1-206ENST00000489914 NKTRP30414 1462 aaKnown RBP10.41□□□□□ -0.74
PCGF1-206ENST00000489914 CHD2O14647 1828 aaKnown RBP10.4□□□□□ -0.74
PCGF1-206ENST00000489914 FAM50AQ14320 339 aaKnown RBP10.4□□□□□ -0.74
PCGF1-206ENST00000489914 NGLY1Q96IV0 654 aa10.4□□□□□ -0.74
PCGF1-206ENST00000489914 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
PCGF1-206ENST00000489914 INSRP06213 1382 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 SRCAPQ6ZRS2 3230 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
PCGF1-206ENST00000489914 ADAMTS2O95450 1211 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 RRP1P56182 461 aaKnown RBP10.39□□□□□ -0.75
PCGF1-206ENST00000489914 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 DDX17Q92841 729 aaKnown RBP10.39□□□□□ -0.75
PCGF1-206ENST00000489914 MAP7D2Q96T17 732 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
PCGF1-206ENST00000489914 ARHGEF5Q12774 1597 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
PCGF1-206ENST00000489914 AHDC1Q5TGY3 1603 aaPredicted RBP10.38□□□□□ -0.75
PCGF1-206ENST00000489914 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
PCGF1-206ENST00000489914 NCLP19338 710 aaKnown RBP10.38□□□□□ -0.75
PCGF1-206ENST00000489914 CALD1Q05682 793 aaKnown RBP10.38□□□□□ -0.75
PCGF1-206ENST00000489914 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
PCGF1-206ENST00000489914 NAP1L5Q96NT1 182 aaPredicted RBP10.38□□□□□ -0.75
PCGF1-206ENST00000489914 PDCL3Q9H2J4 239 aa10.38□□□□□ -0.75
PCGF1-206ENST00000489914 RRP7BPQ9NSQ0 103 aa10.38□□□□□ -0.75
PCGF1-206ENST00000489914 BECN1Q14457 450 aa10.37□□□□□ -0.75
PCGF1-206ENST00000489914 C19orf44Q9H6X5 657 aa10.37□□□□□ -0.75
PCGF1-206ENST00000489914 MYO5BQ9ULV0 1848 aa10.36□□□□□ -0.75
PCGF1-206ENST00000489914 DIP2AQ14689 1571 aa10.35□□□□□ -0.75
PCGF1-206ENST00000489914 ARHGAP31Q2M1Z3 1444 aa10.35□□□□□ -0.75
PCGF1-206ENST00000489914 CHGAP10645 457 aaKnown RBP10.35□□□□□ -0.75
PCGF1-206ENST00000489914 PTPN23Q9H3S7 1636 aa10.35□□□□□ -0.75
PCGF1-206ENST00000489914 MAST1Q9Y2H9 1570 aa10.35□□□□□ -0.75
PCGF1-206ENST00000489914 TERF1P54274 439 aa10.34□□□□□ -0.75
PCGF1-206ENST00000489914 FAM161AQ3B820 660 aa10.34□□□□□ -0.75
PCGF1-206ENST00000489914 MTERF4Q7Z6M4 381 aaKnown RBP10.34□□□□□ -0.75
PCGF1-206ENST00000489914 LRRC59Q96AG4 307 aaKnown RBP10.34□□□□□ -0.75
PCGF1-206ENST00000489914 RNF216Q9NWF9 866 aaPredicted RBP10.34□□□□□ -0.75
PCGF1-206ENST00000489914 USP21Q9UK80 565 aa10.34□□□□□ -0.75
PCGF1-206ENST00000489914 KANK1Q14678 1352 aa10.34□□□□□ -0.75
PCGF1-206ENST00000489914 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
PCGF1-206ENST00000489914 CENPQQ7L2Z9 268 aaPredicted RBP10.33□□□□□ -0.76
PCGF1-206ENST00000489914 RCAN3Q9UKA8 241 aa10.33□□□□□ -0.76
PCGF1-206ENST00000489914 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
PCGF1-206ENST00000489914 BRD4O60885 1362 aaPredicted RBP10.32□□□□□ -0.76
PCGF1-206ENST00000489914 KIF15Q9NS87 1388 aa10.32□□□□□ -0.76
PCGF1-206ENST00000489914 TBX22Q9Y458 520 aa10.32□□□□□ -0.76
PCGF1-206ENST00000489914 ADGRB3O60242 1522 aa10.32□□□□□ -0.76
PCGF1-206ENST00000489914 RIMS2Q9UQ26 1411 aa10.32□□□□□ -0.76
PCGF1-206ENST00000489914 PLEKHG1Q9ULL1 1385 aa10.31□□□□□ -0.76
PCGF1-206ENST00000489914 GOLGA6L3A6NEY3 463 aa10.31□□□□□ -0.76
PCGF1-206ENST00000489914 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
PCGF1-206ENST00000489914 TRPC5Q9UL62 973 aaPredicted RBP10.31□□□□□ -0.76
PCGF1-206ENST00000489914 LRPPRCP42704 1394 aaKnown RBP10.3□□□□□ -0.76
PCGF1-206ENST00000489914 PNPLA6Q8IY17 1366 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 ASXL1Q8IXJ9 1541 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 PTMSP20962 102 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 RALBP1Q15311 655 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 CCDC184Q52MB2 194 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 DEFB132Q7Z7B7 95 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 AMOTL2Q9Y2J4 779 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 NCOA3Q9Y6Q9 1424 aa10.3□□□□□ -0.76
PCGF1-206ENST00000489914 PSDA5PKW4 1024 aaPredicted RBP10.29□□□□□ -0.76
PCGF1-206ENST00000489914 MRE11P49959 708 aa10.29□□□□□ -0.76
PCGF1-206ENST00000489914 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
PCGF1-206ENST00000489914 DCAF11Q8TEB1 546 aa10.29□□□□□ -0.76
PCGF1-206ENST00000489914 PNISRQ8TF01 805 aaKnown RBP10.29□□□□□ -0.76
PCGF1-206ENST00000489914 RRAGDQ9NQL2 400 aaPredicted RBP10.29□□□□□ -0.76
PCGF1-206ENST00000489914 CHIC2Q9UKJ5 165 aa10.29□□□□□ -0.76
PCGF1-206ENST00000489914 NAIPQ13075 1403 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms