RNA–Protein interactions for RNA: ENST00000489838.5

WDR48-210, Transcript of WD repeat domain 48, humanhuman

TSL 3

Gene WDR48, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-210ENST00000489838 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
WDR48-210ENST00000489838 PKD2L1Q9P0L9 805 aa11.49□□□□□ -0.57
WDR48-210ENST00000489838 RNF19BQ6ZMZ0 732 aa11.48□□□□□ -0.57
WDR48-210ENST00000489838 PARP9Q8IXQ6 854 aa11.48□□□□□ -0.57
WDR48-210ENST00000489838 PRDM9Q9NQV7 894 aa11.48□□□□□ -0.57
WDR48-210ENST00000489838 FCF1Q9Y324 198 aaKnown RBP11.48□□□□□ -0.57
WDR48-210ENST00000489838 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
WDR48-210ENST00000489838 RPIAP49247 311 aa11.47□□□□□ -0.57
WDR48-210ENST00000489838 MSS51Q4VC12 460 aa11.47□□□□□ -0.57
WDR48-210ENST00000489838 GIGYF2Q6Y7W6 1299 aaKnown RBP11.47□□□□□ -0.57
WDR48-210ENST00000489838 FAM217BQ9NTX9 383 aaPredicted RBP11.46□□□□□ -0.57
WDR48-210ENST00000489838 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
WDR48-210ENST00000489838 PKDCCQ504Y2 493 aa11.44□□□□□ -0.58
WDR48-210ENST00000489838 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
WDR48-210ENST00000489838 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
WDR48-210ENST00000489838 FAM187AA6NFU0 413 aa11.4□□□□□ -0.58
WDR48-210ENST00000489838 MMP16P51512 607 aa11.4□□□□□ -0.58
WDR48-210ENST00000489838 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.58
WDR48-210ENST00000489838 GPBP1L1Q9HC44 474 aaPredicted RBP11.4□□□□□ -0.58
WDR48-210ENST00000489838 KDM4CQ9H3R0 1056 aa11.39□□□□□ -0.59
WDR48-210ENST00000489838 TOR4AQ9NXH8 423 aa11.39□□□□□ -0.59
WDR48-210ENST00000489838 KDM4AO75164 1064 aa11.38□□□□□ -0.59
WDR48-210ENST00000489838 MS4A1P11836 297 aa11.38□□□□□ -0.59
WDR48-210ENST00000489838 HLA-CQ95604 372 aa11.38□□□□□ -0.59
WDR48-210ENST00000489838 BRPF1P55201 1214 aaPredicted RBP11.37□□□□□ -0.59
WDR48-210ENST00000489838 FOXC1Q12948 553 aa11.37□□□□□ -0.59
WDR48-210ENST00000489838 Q3C1V9 767 aa11.37□□□□□ -0.59
WDR48-210ENST00000489838 POTECB2RU33 542 aa11.36□□□□□ -0.59
WDR48-210ENST00000489838 USP46P62068 366 aa11.36□□□□□ -0.59
WDR48-210ENST00000489838 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
WDR48-210ENST00000489838 AAASQ9NRG9 546 aa11.36□□□□□ -0.59
WDR48-210ENST00000489838 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
WDR48-210ENST00000489838 CD2BP2O95400 341 aaKnown RBP11.35□□□□□ -0.59
WDR48-210ENST00000489838 AVPP01185 164 aa11.35□□□□□ -0.59
WDR48-210ENST00000489838 CRIPAKQ8N1N5 446 aa11.35□□□□□ -0.59
WDR48-210ENST00000489838 ZNF775Q96BV0 537 aaPredicted RBP11.35□□□□□ -0.59
WDR48-210ENST00000489838 HOXA2O43364 376 aa11.34□□□□□ -0.59
WDR48-210ENST00000489838 ST8SIA5O15466 376 aa11.33□□□□□ -0.6
WDR48-210ENST00000489838 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
WDR48-210ENST00000489838 USB1Q9BQ65 265 aaKnown RBP11.33□□□□□ -0.6
WDR48-210ENST00000489838 WNT7AO00755 349 aa11.29□□□□□ -0.6
WDR48-210ENST00000489838 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
WDR48-210ENST00000489838 TRIM32Q13049 653 aa11.29□□□□□ -0.6
WDR48-210ENST00000489838 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
WDR48-210ENST00000489838 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
WDR48-210ENST00000489838 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
WDR48-210ENST00000489838 SPIRE2Q8WWL2 714 aa11.28□□□□□ -0.6
WDR48-210ENST00000489838 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
WDR48-210ENST00000489838 CYP4X1Q8N118 509 aa11.27□□□□□ -0.61
WDR48-210ENST00000489838 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
WDR48-210ENST00000489838 DACH1Q9UI36 760 aa11.26□□□□□ -0.61
WDR48-210ENST00000489838 TBC1D2Q9BYX2 928 aa11.25□□□□□ -0.61
WDR48-210ENST00000489838 SYMPKQ92797 1274 aaKnown RBP11.24□□□□□ -0.61
WDR48-210ENST00000489838 SMPD1P17405 629 aa11.23□□□□□ -0.61
WDR48-210ENST00000489838 SKOR1P84550 965 aa11.23□□□□□ -0.61
WDR48-210ENST00000489838 CTC1Q2NKJ3 1217 aa11.23□□□□□ -0.61
WDR48-210ENST00000489838 JUNDP17535 347 aa11.22□□□□□ -0.61
WDR48-210ENST00000489838 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
WDR48-210ENST00000489838 IL27Q8NEV9 243 aa11.22□□□□□ -0.61
WDR48-210ENST00000489838 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
WDR48-210ENST00000489838 PCDHGC3Q9UN70 934 aa11.22□□□□□ -0.61
WDR48-210ENST00000489838 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
WDR48-210ENST00000489838 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
WDR48-210ENST00000489838 SNIP1Q8TAD8 396 aaKnown RBP11.21□□□□□ -0.61
WDR48-210ENST00000489838 MRGPRX2Q96LB1 330 aa11.21□□□□□ -0.61
WDR48-210ENST00000489838 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
WDR48-210ENST00000489838 AXIN1O15169 862 aa11.2□□□□□ -0.62
WDR48-210ENST00000489838 NDUFV2P19404 249 aa11.19□□□□□ -0.62
WDR48-210ENST00000489838 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
WDR48-210ENST00000489838 TTC24A2A3L6 582 aaPredicted RBP11.18□□□□□ -0.62
WDR48-210ENST00000489838 J3QL48 77 aa11.18□□□□□ -0.62
WDR48-210ENST00000489838 FDX1P10109 184 aa11.18□□□□□ -0.62
WDR48-210ENST00000489838 WNT7BP56706 349 aa11.18□□□□□ -0.62
WDR48-210ENST00000489838 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
WDR48-210ENST00000489838 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
WDR48-210ENST00000489838 GMPR2Q9P2T1 348 aaKnown RBP11.17□□□□□ -0.62
WDR48-210ENST00000489838 GJA5P36382 358 aa11.16□□□□□ -0.62
WDR48-210ENST00000489838 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
WDR48-210ENST00000489838 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
WDR48-210ENST00000489838 PTCRAQ6ISU1 281 aaPredicted RBP11.16□□□□□ -0.62
WDR48-210ENST00000489838 CCDC24Q8N4L8 307 aa11.16□□□□□ -0.62
WDR48-210ENST00000489838 SPTLC1O15269 473 aa11.15□□□□□ -0.62
WDR48-210ENST00000489838 CLK2P49760 499 aaKnown RBP11.15□□□□□ -0.62
WDR48-210ENST00000489838 NUDT12Q9BQG2 462 aa11.14□□□□□ -0.63
WDR48-210ENST00000489838 POLR3EQ9NVU0 708 aa11.14□□□□□ -0.63
WDR48-210ENST00000489838 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
WDR48-210ENST00000489838 SIAH2O43255 324 aa11.12□□□□□ -0.63
WDR48-210ENST00000489838 HPS1Q92902 700 aa11.12□□□□□ -0.63
WDR48-210ENST00000489838 LIMD1Q9UGP4 676 aa11.12□□□□□ -0.63
WDR48-210ENST00000489838 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
WDR48-210ENST00000489838 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
WDR48-210ENST00000489838 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
WDR48-210ENST00000489838 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
WDR48-210ENST00000489838 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
WDR48-210ENST00000489838 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
WDR48-210ENST00000489838 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
WDR48-210ENST00000489838 PTPRNQ16849 979 aa11.09□□□□□ -0.63
WDR48-210ENST00000489838 ATP13A2Q9NQ11 1180 aa11.09□□□□□ -0.63
WDR48-210ENST00000489838 CCNYL3P0C7X3 344 aa11.08□□□□□ -0.64
WDR48-210ENST00000489838 MTMR2Q13614 643 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms