RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
NOD1-208ENST00000489614 NWD1Q149M9 1564 aa13.31□□□□□ -0.28
NOD1-208ENST00000489614 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
NOD1-208ENST00000489614 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
NOD1-208ENST00000489614 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
NOD1-208ENST00000489614 ZNF326Q5BKZ1 582 aaKnown RBP13.29□□□□□ -0.28
NOD1-208ENST00000489614 LRPPRCP42704 1394 aaKnown RBP13.28□□□□□ -0.28
NOD1-208ENST00000489614 FAM135BQ49AJ0 1406 aa13.27□□□□□ -0.29
NOD1-208ENST00000489614 CEBPAP49715 358 aaPredicted RBP13.26□□□□□ -0.29
NOD1-208ENST00000489614 MON2Q7Z3U7 1717 aa13.26□□□□□ -0.29
NOD1-208ENST00000489614 STRCQ7RTU9 1775 aa13.26□□□□□ -0.29
NOD1-208ENST00000489614 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
NOD1-208ENST00000489614 A0A0U1RQG5 324 aaPredicted RBP13.26□□□□□ -0.29
NOD1-208ENST00000489614 BRPF3Q9ULD4 1205 aa13.26□□□□□ -0.29
NOD1-208ENST00000489614 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
NOD1-208ENST00000489614 PTPRUQ92729 1446 aa13.25□□□□□ -0.29
NOD1-208ENST00000489614 NRKQ7Z2Y5 1582 aa13.25□□□□□ -0.29
NOD1-208ENST00000489614 STRCP1A6NGW2 1772 aa13.24□□□□□ -0.29
NOD1-208ENST00000489614 NALCNQ8IZF0 1738 aa13.24□□□□□ -0.29
NOD1-208ENST00000489614 KIF20BQ96Q89 1820 aa13.24□□□□□ -0.29
NOD1-208ENST00000489614 METP08581 1390 aa13.24□□□□□ -0.29
NOD1-208ENST00000489614 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
NOD1-208ENST00000489614 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
NOD1-208ENST00000489614 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
NOD1-208ENST00000489614 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
NOD1-208ENST00000489614 SIRT1Q96EB6 747 aa13.23□□□□□ -0.29
NOD1-208ENST00000489614 ESF1Q9H501 851 aaKnown RBP13.23□□□□□ -0.29
NOD1-208ENST00000489614 FMN2Q9NZ56 1722 aa13.23□□□□□ -0.29
NOD1-208ENST00000489614 USP54Q70EL1 1684 aa13.22□□□□□ -0.29
NOD1-208ENST00000489614 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
NOD1-208ENST00000489614 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
NOD1-208ENST00000489614 LTKP29376 864 aa13.22□□□□□ -0.29
NOD1-208ENST00000489614 GLIPR1L2Q4G1C9 344 aa13.21□□□□□ -0.29
NOD1-208ENST00000489614 CD163L1Q9NR16 1453 aa13.21□□□□□ -0.29
NOD1-208ENST00000489614 XIRP1Q702N8 1843 aaKnown RBP13.21□□□□□ -0.3
NOD1-208ENST00000489614 PER1O15534 1290 aaPredicted RBP13.2□□□□□ -0.3
NOD1-208ENST00000489614 RGPD8O14715 1765 aaPredicted RBP13.2□□□□□ -0.3
NOD1-208ENST00000489614 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
NOD1-208ENST00000489614 CENPJQ9HC77 1338 aaPredicted RBP13.19□□□□□ -0.3
NOD1-208ENST00000489614 NPC1L1Q9UHC9 1359 aa13.18□□□□□ -0.3
NOD1-208ENST00000489614 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
NOD1-208ENST00000489614 NUTM2DQ5VT03 806 aaPredicted RBP13.18□□□□□ -0.3
NOD1-208ENST00000489614 TMEM132EQ6IEE7 984 aa13.18□□□□□ -0.3
NOD1-208ENST00000489614 LMTK3Q96Q04 1460 aa13.18□□□□□ -0.3
NOD1-208ENST00000489614 TMF1P82094 1093 aa13.17□□□□□ -0.3
NOD1-208ENST00000489614 KTN1Q86UP2 1357 aaKnown RBP13.17□□□□□ -0.3
NOD1-208ENST00000489614 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
NOD1-208ENST00000489614 PARD3Q8TEW0 1356 aa13.17□□□□□ -0.3
NOD1-208ENST00000489614 CDC42BPGQ6DT37 1551 aa13.16□□□□□ -0.3
NOD1-208ENST00000489614 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
NOD1-208ENST00000489614 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.3
NOD1-208ENST00000489614 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
NOD1-208ENST00000489614 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
NOD1-208ENST00000489614 NINLQ9Y2I6 1382 aa13.14□□□□□ -0.31
NOD1-208ENST00000489614 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
NOD1-208ENST00000489614 ROBO2Q9HCK4 1378 aa13.14□□□□□ -0.31
NOD1-208ENST00000489614 SHPRHQ149N8 1683 aa13.14□□□□□ -0.31
NOD1-208ENST00000489614 ATP7BP35670 1465 aa13.14□□□□□ -0.31
NOD1-208ENST00000489614 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
NOD1-208ENST00000489614 LAS1LQ9Y4W2 734 aaKnown RBP13.13□□□□□ -0.31
NOD1-208ENST00000489614 NEFMP07197 916 aa13.13□□□□□ -0.31
NOD1-208ENST00000489614 B4GALNT3Q6L9W6 998 aa13.12□□□□□ -0.31
NOD1-208ENST00000489614 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
NOD1-208ENST00000489614 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
NOD1-208ENST00000489614 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
NOD1-208ENST00000489614 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
NOD1-208ENST00000489614 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
NOD1-208ENST00000489614 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
NOD1-208ENST00000489614 ANP32AP39687 249 aaKnown RBP13.1□□□□□ -0.31
NOD1-208ENST00000489614 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
NOD1-208ENST00000489614 CPSF1Q10570 1443 aaKnown RBP13.09□□□□□ -0.31
NOD1-208ENST00000489614 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
NOD1-208ENST00000489614 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
NOD1-208ENST00000489614 ANKRD36BQ8N2N9 1353 aa13.08□□□□□ -0.32
NOD1-208ENST00000489614 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
NOD1-208ENST00000489614 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.32
NOD1-208ENST00000489614 PRAM1Q96QH2 718 aa13.07□□□□□ -0.32
NOD1-208ENST00000489614 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
NOD1-208ENST00000489614 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
NOD1-208ENST00000489614 CARD14Q9BXL6 1004 aa13.06□□□□□ -0.32
NOD1-208ENST00000489614 EID1Q9Y6B2 187 aa13.06□□□□□ -0.32
NOD1-208ENST00000489614 ANP32CO43423 234 aa13.06□□□□□ -0.32
NOD1-208ENST00000489614 PANK3Q9H999 370 aa13.05□□□□□ -0.32
NOD1-208ENST00000489614 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
NOD1-208ENST00000489614 INSRP06213 1382 aa13.05□□□□□ -0.32
NOD1-208ENST00000489614 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
NOD1-208ENST00000489614 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
NOD1-208ENST00000489614 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
NOD1-208ENST00000489614 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
NOD1-208ENST00000489614 PIK3C2AO00443 1686 aa13.03□□□□□ -0.32
NOD1-208ENST00000489614 A0A1W2PP64 1363 aa13.03□□□□□ -0.32
NOD1-208ENST00000489614 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
NOD1-208ENST00000489614 PPP4R2Q9NY27 417 aa13.02□□□□□ -0.32
NOD1-208ENST00000489614 BRD4O60885 1362 aaPredicted RBP13.02□□□□□ -0.32
NOD1-208ENST00000489614 RALBP1Q15311 655 aa13.02□□□□□ -0.33
NOD1-208ENST00000489614 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
NOD1-208ENST00000489614 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
NOD1-208ENST00000489614 NSD2O96028 1365 aa13.02□□□□□ -0.33
NOD1-208ENST00000489614 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.33
NOD1-208ENST00000489614 PDE4CQ08493 712 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms