RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 MYOM2P54296 1465 aa13.01□□□□□ -0.33
CPA4-207ENST00000488025 RGPD1P0DJD0 1748 aa13□□□□□ -0.33
CPA4-207ENST00000488025 VPS8Q8N3P4 1428 aa13□□□□□ -0.33
CPA4-207ENST00000488025 KIF1BO60333 1816 aa12.99□□□□□ -0.33
CPA4-207ENST00000488025 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
CPA4-207ENST00000488025 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
CPA4-207ENST00000488025 SF3B2Q13435 895 aaKnown RBP12.98□□□□□ -0.33
CPA4-207ENST00000488025 ABCA3Q99758 1704 aa12.98□□□□□ -0.33
CPA4-207ENST00000488025 CAMTA1Q9Y6Y1 1673 aa12.97□□□□□ -0.33
CPA4-207ENST00000488025 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
CPA4-207ENST00000488025 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
CPA4-207ENST00000488025 USP32Q8NFA0 1604 aa12.96□□□□□ -0.33
CPA4-207ENST00000488025 PXDNQ92626 1479 aa12.96□□□□□ -0.34
CPA4-207ENST00000488025 NWD2Q9ULI1 1742 aa12.96□□□□□ -0.34
CPA4-207ENST00000488025 YY1P25490 414 aa12.95□□□□□ -0.34
CPA4-207ENST00000488025 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
CPA4-207ENST00000488025 SLIT2O94813 1529 aa12.93□□□□□ -0.34
CPA4-207ENST00000488025 NEXMIFQ5QGS0 1516 aa12.93□□□□□ -0.34
CPA4-207ENST00000488025 CLTCL1P53675 1640 aa12.93□□□□□ -0.34
CPA4-207ENST00000488025 PLEKHG5O94827 1062 aa12.93□□□□□ -0.34
CPA4-207ENST00000488025 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
CPA4-207ENST00000488025 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
CPA4-207ENST00000488025 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
CPA4-207ENST00000488025 UNC5CLQ8IV45 518 aa12.92□□□□□ -0.34
CPA4-207ENST00000488025 ROBO2Q9HCK4 1378 aa12.92□□□□□ -0.34
CPA4-207ENST00000488025 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
CPA4-207ENST00000488025 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
CPA4-207ENST00000488025 CHD4Q14839 1912 aa12.9□□□□□ -0.35
CPA4-207ENST00000488025 NUP188Q5SRE5 1749 aa12.89□□□□□ -0.35
CPA4-207ENST00000488025 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
CPA4-207ENST00000488025 BAG6P46379 1132 aa12.89□□□□□ -0.35
CPA4-207ENST00000488025 ESCO1Q5FWF5 840 aa12.89□□□□□ -0.35
CPA4-207ENST00000488025 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
CPA4-207ENST00000488025 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
CPA4-207ENST00000488025 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
CPA4-207ENST00000488025 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
CPA4-207ENST00000488025 A0A0G2JS52 829 aa12.88□□□□□ -0.35
CPA4-207ENST00000488025 FOXO3O43524 673 aa12.88□□□□□ -0.35
CPA4-207ENST00000488025 MYT1Q01538 1121 aa12.88□□□□□ -0.35
CPA4-207ENST00000488025 FAM50AQ14320 339 aaKnown RBP12.88□□□□□ -0.35
CPA4-207ENST00000488025 RREB1Q92766 1687 aa12.88□□□□□ -0.35
CPA4-207ENST00000488025 PPLO60437 1756 aa12.88□□□□□ -0.35
CPA4-207ENST00000488025 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
CPA4-207ENST00000488025 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
CPA4-207ENST00000488025 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
CPA4-207ENST00000488025 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
CPA4-207ENST00000488025 VPS72Q15906 364 aa12.83□□□□□ -0.36
CPA4-207ENST00000488025 EZH2Q15910 746 aaKnown RBP12.83□□□□□ -0.36
CPA4-207ENST00000488025 NUP155O75694 1391 aa12.82□□□□□ -0.36
CPA4-207ENST00000488025 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
CPA4-207ENST00000488025 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
CPA4-207ENST00000488025 FAM98CQ17RN3 349 aaKnown RBP12.81□□□□□ -0.36
CPA4-207ENST00000488025 THSD7AQ9UPZ6 1657 aa12.8□□□□□ -0.36
CPA4-207ENST00000488025 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
CPA4-207ENST00000488025 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
CPA4-207ENST00000488025 NAIPQ13075 1403 aa12.79□□□□□ -0.36
CPA4-207ENST00000488025 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
CPA4-207ENST00000488025 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
CPA4-207ENST00000488025 ADGRB2O60241 1585 aa12.78□□□□□ -0.36
CPA4-207ENST00000488025 KNDC1Q76NI1 1749 aa12.78□□□□□ -0.36
CPA4-207ENST00000488025 COL14A1Q05707 1796 aaKnown RBP12.78□□□□□ -0.36
CPA4-207ENST00000488025 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
CPA4-207ENST00000488025 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
CPA4-207ENST00000488025 APLP2Q06481 763 aa12.76□□□□□ -0.37
CPA4-207ENST00000488025 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
CPA4-207ENST00000488025 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
CPA4-207ENST00000488025 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
CPA4-207ENST00000488025 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
CPA4-207ENST00000488025 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
CPA4-207ENST00000488025 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
CPA4-207ENST00000488025 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
CPA4-207ENST00000488025 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
CPA4-207ENST00000488025 MYOM1P52179 1685 aa12.75□□□□□ -0.37
CPA4-207ENST00000488025 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
CPA4-207ENST00000488025 SBF2Q86WG5 1849 aa12.75□□□□□ -0.37
CPA4-207ENST00000488025 PRAG1Q86YV5 1406 aa12.75□□□□□ -0.37
CPA4-207ENST00000488025 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
CPA4-207ENST00000488025 CCDC144AA2RUR9 1427 aa12.74□□□□□ -0.37
CPA4-207ENST00000488025 PLEKHH1Q9ULM0 1364 aa12.74□□□□□ -0.37
CPA4-207ENST00000488025 TRIM37O94972 964 aa12.74□□□□□ -0.37
CPA4-207ENST00000488025 CAMKK2Q96RR4 588 aa12.74□□□□□ -0.37
CPA4-207ENST00000488025 STK26Q9P289 416 aa12.74□□□□□ -0.37
CPA4-207ENST00000488025 PPP1R1BQ9UD71 204 aaPredicted RBP12.74□□□□□ -0.37
CPA4-207ENST00000488025 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
CPA4-207ENST00000488025 CASZ1Q86V15 1759 aa12.73□□□□□ -0.37
CPA4-207ENST00000488025 ITGAEP38570 1179 aa12.72□□□□□ -0.37
CPA4-207ENST00000488025 ZNF784Q8NCA9 323 aaPredicted RBP12.72□□□□□ -0.37
CPA4-207ENST00000488025 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
CPA4-207ENST00000488025 UTRNP46939 3433 aa12.71□□□□□ -0.37
CPA4-207ENST00000488025 APBA3O96018 575 aa12.7□□□□□ -0.38
CPA4-207ENST00000488025 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
CPA4-207ENST00000488025 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
CPA4-207ENST00000488025 ROCK1Q13464 1354 aa12.68□□□□□ -0.38
CPA4-207ENST00000488025 SPATA31A5Q5VU36 1347 aa12.67□□□□□ -0.38
CPA4-207ENST00000488025 SPATA31A7Q8IWB4 1347 aa12.67□□□□□ -0.38
CPA4-207ENST00000488025 SPON1Q9HCB6 807 aa12.67□□□□□ -0.38
CPA4-207ENST00000488025 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
CPA4-207ENST00000488025 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
CPA4-207ENST00000488025 CEP350Q5VT06 3117 aa12.66□□□□□ -0.38
CPA4-207ENST00000488025 KCNQ2O43526 872 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms