RNA–Protein interactions for RNA: ENST00000487600.1

NKRF-203, Transcript of NFKB repressing factor, humanhuman

TSL 5

Gene NKRF, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-203ENST00000487600 PRDM9Q9NQV7 894 aa13.81□□□□□ -0.2
NKRF-203ENST00000487600 CLCN1P35523 988 aa13.8□□□□□ -0.2
NKRF-203ENST00000487600 GPCPD1Q9NPB8 672 aa13.79□□□□□ -0.2
NKRF-203ENST00000487600 CYP4X1Q8N118 509 aa13.77□□□□□ -0.21
NKRF-203ENST00000487600 USB1Q9BQ65 265 aaKnown RBP13.77□□□□□ -0.21
NKRF-203ENST00000487600 PKD2L1Q9P0L9 805 aa13.77□□□□□ -0.21
NKRF-203ENST00000487600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.74□□□□□ -0.21
NKRF-203ENST00000487600 MMP16P51512 607 aa13.73□□□□□ -0.21
NKRF-203ENST00000487600 NUTM1Q86Y26 1132 aa13.73□□□□□ -0.21
NKRF-203ENST00000487600 HOXA2O43364 376 aa13.71□□□□□ -0.21
NKRF-203ENST00000487600 FAM217BQ9NTX9 383 aaPredicted RBP13.71□□□□□ -0.21
NKRF-203ENST00000487600 TTC24A2A3L6 582 aaPredicted RBP13.69□□□□□ -0.22
NKRF-203ENST00000487600 DXOO77932 396 aaKnown RBP13.68□□□□□ -0.22
NKRF-203ENST00000487600 TOR4AQ9NXH8 423 aa13.68□□□□□ -0.22
NKRF-203ENST00000487600 TRIM32Q13049 653 aa13.67□□□□□ -0.22
NKRF-203ENST00000487600 CCDC24Q8N4L8 307 aa13.67□□□□□ -0.22
NKRF-203ENST00000487600 AAASQ9NRG9 546 aa13.67□□□□□ -0.22
NKRF-203ENST00000487600 HLA-CQ95604 372 aa13.66□□□□□ -0.22
NKRF-203ENST00000487600 WNT7AO00755 349 aa13.64□□□□□ -0.23
NKRF-203ENST00000487600 ST8SIA5O15466 376 aa13.64□□□□□ -0.23
NKRF-203ENST00000487600 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
NKRF-203ENST00000487600 CTC1Q2NKJ3 1217 aa13.63□□□□□ -0.23
NKRF-203ENST00000487600 AVPP01185 164 aa13.62□□□□□ -0.23
NKRF-203ENST00000487600 GUCA2AQ02747 115 aa13.62□□□□□ -0.23
NKRF-203ENST00000487600 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
NKRF-203ENST00000487600 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
NKRF-203ENST00000487600 REPIN1Q9BWE0 567 aaKnown RBP13.62□□□□□ -0.23
NKRF-203ENST00000487600 AXIN1O15169 862 aa13.61□□□□□ -0.23
NKRF-203ENST00000487600 SNIP1Q8TAD8 396 aaKnown RBP13.61□□□□□ -0.23
NKRF-203ENST00000487600 JUNDP17535 347 aa13.6□□□□□ -0.23
NKRF-203ENST00000487600 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
NKRF-203ENST00000487600 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
NKRF-203ENST00000487600 RETREG3Q86VR2 466 aa13.6□□□□□ -0.23
NKRF-203ENST00000487600 FDX1P10109 184 aa13.59□□□□□ -0.23
NKRF-203ENST00000487600 POTECB2RU33 542 aa13.58□□□□□ -0.24
NKRF-203ENST00000487600 C6orf229H3BNL8 230 aa13.57□□□□□ -0.24
NKRF-203ENST00000487600 ZMYND10O75800 440 aa13.57□□□□□ -0.24
NKRF-203ENST00000487600 SYMPKQ92797 1274 aaKnown RBP13.56□□□□□ -0.24
NKRF-203ENST00000487600 MRGPRX2Q96LB1 330 aa13.56□□□□□ -0.24
NKRF-203ENST00000487600 SMCPP49901 116 aaPredicted RBP13.55□□□□□ -0.24
NKRF-203ENST00000487600 WNT7BP56706 349 aa13.55□□□□□ -0.24
NKRF-203ENST00000487600 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
NKRF-203ENST00000487600 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
NKRF-203ENST00000487600 AMHR2Q16671 573 aa13.53□□□□□ -0.24
NKRF-203ENST00000487600 RC3H1Q5TC82 1133 aaKnown RBP13.53□□□□□ -0.24
NKRF-203ENST00000487600 SPIRE2Q8WWL2 714 aa13.53□□□□□ -0.24
NKRF-203ENST00000487600 SMPD1P17405 629 aa13.51□□□□□ -0.25
NKRF-203ENST00000487600 MS4A1P11836 297 aa13.5□□□□□ -0.25
NKRF-203ENST00000487600 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
NKRF-203ENST00000487600 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
NKRF-203ENST00000487600 PCDHGC3Q9UN70 934 aa13.49□□□□□ -0.25
NKRF-203ENST00000487600 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
NKRF-203ENST00000487600 J3QL48 77 aa13.48□□□□□ -0.25
NKRF-203ENST00000487600 DACH1Q9UI36 760 aa13.48□□□□□ -0.25
NKRF-203ENST00000487600 CCNYL3P0C7X3 344 aa13.47□□□□□ -0.25
NKRF-203ENST00000487600 SKOR1P84550 965 aa13.47□□□□□ -0.25
NKRF-203ENST00000487600 GMPR2Q9P2T1 348 aaKnown RBP13.47□□□□□ -0.25
NKRF-203ENST00000487600 MOXD2PA6NHM9 499 aa13.46□□□□□ -0.25
NKRF-203ENST00000487600 SPDYE5A6NIY4 337 aa13.46□□□□□ -0.25
NKRF-203ENST00000487600 NDUFV2P19404 249 aa13.46□□□□□ -0.25
NKRF-203ENST00000487600 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.25
NKRF-203ENST00000487600 MTMR2Q13614 643 aa13.44□□□□□ -0.26
NKRF-203ENST00000487600 PTPRNQ16849 979 aa13.44□□□□□ -0.26
NKRF-203ENST00000487600 EHBP1Q8NDI1 1231 aa13.44□□□□□ -0.26
NKRF-203ENST00000487600 PRR7Q8TB68 274 aa13.43□□□□□ -0.26
NKRF-203ENST00000487600 ALDH1A1P00352 501 aa13.42□□□□□ -0.26
NKRF-203ENST00000487600 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
NKRF-203ENST00000487600 SENP2Q9HC62 589 aa13.42□□□□□ -0.26
NKRF-203ENST00000487600 HPS1Q92902 700 aa13.41□□□□□ -0.26
NKRF-203ENST00000487600 ATP13A2Q9NQ11 1180 aa13.41□□□□□ -0.26
NKRF-203ENST00000487600 GJA5P36382 358 aa13.4□□□□□ -0.26
NKRF-203ENST00000487600 TREML4Q6UXN2 200 aa13.4□□□□□ -0.26
NKRF-203ENST00000487600 AK7Q96M32 723 aa13.4□□□□□ -0.26
NKRF-203ENST00000487600 EVA1BQ9NVM1 165 aa13.4□□□□□ -0.26
NKRF-203ENST00000487600 DESI1Q6ICB0 168 aa13.39□□□□□ -0.27
NKRF-203ENST00000487600 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
NKRF-203ENST00000487600 WASF2Q9Y6W5 498 aa13.39□□□□□ -0.27
NKRF-203ENST00000487600 TRIM66O15016 1216 aa13.38□□□□□ -0.27
NKRF-203ENST00000487600 KCNH2Q12809 1159 aa13.37□□□□□ -0.27
NKRF-203ENST00000487600 PARP9Q8IXQ6 854 aa13.37□□□□□ -0.27
NKRF-203ENST00000487600 UNC93B1Q9H1C4 597 aa13.37□□□□□ -0.27
NKRF-203ENST00000487600 KIFC2Q96AC6 838 aa13.36□□□□□ -0.27
NKRF-203ENST00000487600 SH3BP2P78314 561 aa13.35□□□□□ -0.27
NKRF-203ENST00000487600 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
NKRF-203ENST00000487600 SIAH2O43255 324 aa13.33□□□□□ -0.28
NKRF-203ENST00000487600 ZBTB3Q9H5J0 574 aa13.33□□□□□ -0.28
NKRF-203ENST00000487600 WFS1O76024 890 aa13.32□□□□□ -0.28
NKRF-203ENST00000487600 CTHP32929 405 aa13.32□□□□□ -0.28
NKRF-203ENST00000487600 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
NKRF-203ENST00000487600 BAP1Q92560 729 aa13.32□□□□□ -0.28
NKRF-203ENST00000487600 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
NKRF-203ENST00000487600 SPTLC1O15269 473 aa13.31□□□□□ -0.28
NKRF-203ENST00000487600 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
NKRF-203ENST00000487600 VARSP26640 1264 aaKnown RBP13.29□□□□□ -0.28
NKRF-203ENST00000487600 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
NKRF-203ENST00000487600 ZNF511Q8NB15 262 aa13.29□□□□□ -0.28
NKRF-203ENST00000487600 LCE2AQ5TA79 106 aaPredicted RBP13.28□□□□□ -0.28
NKRF-203ENST00000487600 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
NKRF-203ENST00000487600 LYPD8Q6UX82 237 aa13.28□□□□□ -0.28
NKRF-203ENST00000487600 PCDHB15Q9Y5E8 787 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms